FFCP PHASE1:Hg19::chr10:1034666..1034675,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23560 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21535 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z7A3 | |||
|association_with_transcript=11bp_to_ENST00000545048,uc010qae.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_GTPBP4_5end | |||
|id=chr10:1034666..1034675,+ | |||
|ontology_enrichment_celltype=CL:0002622!2.96e-14!3;CL:0000511!1.06e-11!1;CL:0002625!1.06e-11!1;CL:0000216!1.06e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0000511;4.66e-66;1!CL:0002625;4.66e-66;1!CL:0000216;4.66e-66;1!CL:0000154;2.74e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.66e-66,1;CL:0002625,4.66e-66,1;CL:0000216,4.66e-66,1;CL:0000154,2.74e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000988!4.14e-14!3;UBERON:0000473!2.91e-12!8;UBERON:0001136!1.06e-11!1;UBERON:0001343!1.06e-11!1;UBERON:0004910!1.06e-11!1;UBERON:0005154!1.06e-11!1;UBERON:0005295!1.06e-11!1;UBERON:0004813!1.06e-11!1;UBERON:0005297!1.06e-11!1;UBERON:0005294!1.06e-11!1;UBERON:0010141!1.06e-11!1;UBERON:0005891!1.06e-11!1;UBERON:0003101!1.68e-11!22;UBERON:0000079!1.68e-11!22;UBERON:0003135!4.66e-09!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.11e-74;8!UBERON:0001136;4.66e-66;1!UBERON:0001343;4.66e-66;1!UBERON:0004910;4.66e-66;1!UBERON:0004813;4.66e-66;1!UBERON:0003135;2.16e-54;11!UBERON:0004909;7.04e-34;2!UBERON:0000991;3.84e-29;21!UBERON:0003101;7.08e-28;22!UBERON:0000079;7.08e-28;22!UBERON:0005904;1.03e-17;4!UBERON:0002323;8.54e-11;45!UBERON:0003133;1.50e-10;44!UBERON:0002553;2.07e-08;52!UBERON:0000058;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.11e-74,8;UBERON:0001136,4.66e-66,1;UBERON:0001343,4.66e-66,1;UBERON:0004910,4.66e-66,1;UBERON:0005154,4.66e-66,1;UBERON:0005295,4.66e-66,1;UBERON:0004813,4.66e-66,1;UBERON:0005297,4.66e-66,1;UBERON:0005294,4.66e-66,1;UBERON:0010141,4.66e-66,1;UBERON:0005891,4.66e-66,1;UBERON:0003135,2.16e-54,11;UBERON:0004909,7.05e-34,2;UBERON:0000991,3.84e-29,21;UBERON:0009196,3.84e-29,21;UBERON:0009117,3.84e-29,21;UBERON:0005564,3.84e-29,21;UBERON:0004176,7.08e-28,22;UBERON:0003101,7.08e-28,22;UBERON:0000079,7.08e-28,22;UBERON:0005904,1.03e-17,4;UBERON:0002323,5.85e-14,46;UBERON:0003133,2.00e-13,48;UBERON:0004458,3.57e-13,49;UBERON:0003886,4.68e-12,54;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0002553,8.52e-11,61;UBERON:0004871,1.47e-09,8;UBERON:0004876,2.63e-07,11 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04602485189246,2.94760543171796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@GTPBP4 | |||
}} |
Revision as of 01:20, 11 January 2014
Short description: | p4@GTPBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GTPBP4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 11bp_to_ENST00000545048, uc010qae.1_5end |
EntrezGene: | GTPBP4 |
HGNC: | 21535 |
UniProt: | B7Z7A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.66e-66 | 1 |
seminiferous tubule epithelial cell | 4.66e-66 | 1 |
Sertoli cell | 4.66e-66 | 1 |
protein secreting cell | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 3.11e-74 | 8 |
mesothelium | 4.66e-66 | 1 |
seminiferous tubule of testis | 4.66e-66 | 1 |
epithelium of male gonad | 4.66e-66 | 1 |
epithelial cord | 4.66e-66 | 1 |
sex cord | 4.66e-66 | 1 |
seminiferous tubule epithelium | 4.66e-66 | 1 |
testis sex cord | 4.66e-66 | 1 |
genital ridge | 4.66e-66 | 1 |
primitive sex cord of indifferent gonad | 4.66e-66 | 1 |
coelomic epithelium | 4.66e-66 | 1 |
male reproductive organ | 2.16e-54 | 11 |
epithelium of gonad | 7.05e-34 | 2 |
gonad | 3.84e-29 | 21 |
indifferent external genitalia | 3.84e-29 | 21 |
indifferent gonad | 3.84e-29 | 21 |
gonad primordium | 3.84e-29 | 21 |
external genitalia | 7.08e-28 | 22 |
male organism | 7.08e-28 | 22 |
male reproductive system | 7.08e-28 | 22 |
duct of male reproductive system | 1.03e-17 | 4 |
body cavity | 5.85e-14 | 46 |
reproductive organ | 2.00e-13 | 48 |
body cavity or lining | 3.57e-13 | 49 |
body cavity precursor | 4.68e-12 | 54 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
anatomical cavity | 8.52e-11 | 61 |
somatic layer of lateral plate mesoderm | 1.47e-09 | 8 |
urogenital ridge | 2.63e-07 | 11 |