FFCP PHASE1:Hg19::chr10:99160984..99160999,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29100 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=40bp_to_ENST00000315563_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_RRP12_5end | |||
|id=chr10:99160984..99160999,- | |||
|ontology_enrichment_celltype=CL:0002057!2.93e-29!42;CL:0000860!1.41e-26!45;CL:0000766!2.02e-26!76;CL:0000557!1.34e-23!71;CL:0002009!6.23e-21!65;CL:0000839!3.75e-20!70;CL:0000738!7.16e-20!140;CL:0002194!9.47e-20!63;CL:0000576!9.47e-20!63;CL:0000040!9.47e-20!63;CL:0000559!9.47e-20!63;CL:0000763!1.43e-18!112;CL:0000049!1.43e-18!112;CL:0000037!1.18e-16!172;CL:0000566!1.18e-16!172;CL:0002031!2.51e-15!124;CL:0000988!4.73e-15!182;CL:0002032!6.07e-15!165;CL:0000837!6.07e-15!165;CL:0002087!2.03e-14!119;CL:0002320!4.37e-10!365;CL:0000134!7.89e-10!358;CL:0000219!5.20e-07!390;CL:0002393!5.48e-07!9;CL:0002397!5.48e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.46e-41;33!CL:0002057;8.46e-41;33!CL:0000576;6.62e-31;48!CL:0000473;2.29e-30;39!CL:0000234;2.29e-30;39!CL:0000766;1.76e-25;69!CL:0002087;1.28e-12;104!CL:0000763;1.12e-11;100!CL:0000094;8.14e-11;8!CL:0000738;1.33e-10;136!CL:0002393;1.38e-08;6!CL:0002397;1.38e-08;6!CL:0000219;3.76e-08;193!CL:0000624;1.37e-07;6!CL:0000081;2.56e-07;11!CL:0000988;5.43e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.19e-56,42;CL:0002057,8.19e-56,42;CL:0000766,1.11e-51,72;CL:0000473,5.75e-51,48;CL:0000234,5.75e-51,48;CL:0000738,9.11e-48,136;CL:0000557,4.63e-46,67;CL:0002009,1.11e-41,61;CL:0000839,1.74e-40,66;CL:0002194,2.68e-39,59;CL:0000576,2.68e-39,59;CL:0000040,2.68e-39,59;CL:0000559,2.68e-39,59;CL:0000037,4.18e-38,168;CL:0002031,3.89e-37,120;CL:0002087,2.41e-35,115;CL:0000988,9.71e-35,177;CL:0000763,1.83e-34,108;CL:0000049,1.83e-34,108;CL:0002032,5.33e-34,161;CL:0000837,5.33e-34,161;CL:0002320,4.83e-22,361;CL:0000134,7.92e-22,354;CL:0000219,5.25e-17,386;CL:0000034,1.56e-16,441;CL:0000048,1.88e-16,427;CL:0000723,9.44e-16,433;CL:0002393,3.71e-12,9;CL:0002397,3.71e-12,9;CL:0000094,7.67e-11,8;CL:0000624,1.33e-07,6;CL:0000081,2.45e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-40;42!CL:0000049;5.22e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.70e-23!102;UBERON:0003061!7.70e-23!102;UBERON:0002371!1.94e-22!80;UBERON:0001474!1.50e-21!86;UBERON:0002193!2.43e-18!112;UBERON:0004765!1.30e-15!101;UBERON:0001434!1.30e-15!101;UBERON:0002405!1.24e-12!115;UBERON:0002384!3.83e-09!375;UBERON:0002204!4.32e-08!167;UBERON:0003081!6.21e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-45,76;UBERON:0002390,5.21e-44,98;UBERON:0003061,5.21e-44,98;UBERON:0001474,2.27e-42,82;UBERON:0004765,4.24e-41,90;UBERON:0002193,7.77e-38,108;UBERON:0002405,3.13e-35,93;UBERON:0001434,6.90e-35,100;UBERON:0002384,4.27e-21,371;UBERON:0003081,9.55e-20,203;UBERON:0002204,3.27e-19,167;UBERON:0000926,1.63e-09,315;UBERON:0004120,1.63e-09,315;UBERON:0006603,1.63e-09,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,2.65117900582333,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,29.1089564868189,18.8076405067634,16.5653251948201,0,1.204823675113,0.369754010166788,0,0,3.81680571135301,21.0518255242113,19.6533558520739,16.4928261744047,0,0,0.257575567634187,24.5723023537464,30.9858273824824,21.5899814457156,22.08075850604,27.9594163854842,27.2541606387691,18.9876978932619,32.0200883161376,24.3576696785243,39.9904989654477,58.7391062061282,46.0450054420762,23.9067771219108,27.5635211558424,11.0114507378091,24.7927952820431,34.339405897142,27.4914964093588,19.791078011203,37.1002403176235,29.4095077867559,28.1502961469727,27.8018760098659,16.1933784738849,23.8686231993906,55.7986722709615,28.6689275010754,21.1889825921679,30.9353214229554,24.3676038329481,9.92899845666126,7.22854619881148,15.3050811221114,9.66026227859858,9.91167492753942,9.48280961512773,27.3612233991599,9.54800050555633,16.6224379925817,0,0,0.889509253863555,2.13365111283254,0,0,0,0,14.2303242277362,4.69789751496751,3.44045905312706,3.96513985737078,2.80254281490768,2.10707267820062,4.91774425284583,7.07419372948497,18.0929319119568,0.334372990781356,2.60737813306872,3.31413464014313,7.79306913631645,1.6711568532776,3.53527088969805,1.55073726208535,3.5204502289452,0.128091319725675,1.1705341280389,0.164437904603676,0,0.289803085735052,3.55887751588945,5.88589821797369,5.22677619024884,0.566546713487831,13.4127172760672,16.4941173831662,14.6751421371312,0,0,0,2.55977702432214,0.383959833463255,0,0.473554504088034,0,8.87069670188823,11.2324882229073,9.70323506014753,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.144846518960824,0,1.94653948121054,0,0,0.175669571386252,0.261958150995425,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0.953962497221368,1.14398982156026,1.48583000531826,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0.488124115096339,0,0,0,0.22452937262617,0,1.53316637465883,0,0,2.63560834872127,34.9002237733493,0,0,0.25326102332916,1.05927344650575,0.573673241497627,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0,0,0,0.576175924479999,0.234321431833797,0,1.1409436430889,0.448346041655403,0.117434498643765,0.161872944368132,0.421352420106746,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.340296549480063,2.69084453533293,0,0,3.00091096084402,0.309157587715317,5.66809188100384,0,1.35021065793013,0.0974370051611986,1.51460264546469,0,0.161646056818812,13.4903645156313,0.302256294682921,0,0.386521706326594,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,5.10804720835177,3.60939740834793,0.118306800039844,0.168584690078102,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.343135620597051,0.548751427043128,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,1.40402559083543,0.891786973732369,1.87467667973554,0,0,0.179117045405697,0,0,1.47798971368783,0.352193736052904,14.3056399723133,4.03535869567492,10.3518795409632,0.126995788584338,0.763976851116555,0,0,0.102827492703324,0,0,0.112131084345361,0,0,1.29271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0.857867961948885,0,0,0.325736184293735,1.77695974371273,0,0.904318131178758,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,6.5020150866636,6.68445482064504,6.28880877770767,0,1.30139853857622,0,0,0,16.478154526838,5.9832291840805,12.4324654030811,0.12269149171914,1.50051156317903,0.813795071099207,0,0.178428988797162,0.315404830067869,0,0,0,2.0694614258501,0,0,0.173767228936166,0,0,3.3082884179662,15.747136659759,4.37582986994122,1.21251028578504,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.246381468041427,0.519254429183621,0.116210378459959,0.120859449591622,0.601519410909855,0.368323955743585,0,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0.647747748306418,0,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.495854746082934,0.192190067365106,5.99779748724545,0.4046311234222,0.464845549297286,1.25924938732256,0.6970372701606,0,1.06461206063404,0,0,0.143124886741991,0,0,0.190630193923825,0.511795582622668,0.42793898803392,0,0.78494864019923,0,0,0,1.01091240786658,1.58510321173008,0.421258456238981,0,0.487426979262569,2.11300293513511,0,0,0,0,2.65375590096488,0.438450885253763,0,0.655894752046633,1.01455188481352,0.30982349809975,0,0.717056761020258,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0,2.17781969722645,0.0941438007767792,0.86101074534246,0,0.443430153536676,0,3.55213326462519,1.52927441428475,0,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| |||
|short_description=p3@RRP12 | |||
}} |
Revision as of 04:25, 11 January 2014
Short description: | p3@RRP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RRP12_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 40bp_to_ENST00000315563_5end |
EntrezGene: | RRP12 |
HGNC: | 29100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-45 | 76 |
hematopoietic system | 5.21e-44 | 98 |
blood island | 5.21e-44 | 98 |
bone element | 2.27e-42 | 82 |
skeletal element | 4.24e-41 | 90 |
hemolymphoid system | 7.77e-38 | 108 |
immune system | 3.13e-35 | 93 |
skeletal system | 6.90e-35 | 100 |
connective tissue | 4.27e-21 | 371 |
lateral plate mesoderm | 9.55e-20 | 203 |
musculoskeletal system | 3.27e-19 | 167 |
mesoderm | 1.63e-09 | 315 |
mesoderm-derived structure | 1.63e-09 | 315 |
presumptive mesoderm | 1.63e-09 | 315 |