FFCP PHASE1:Hg19::chr10:126847417..126847439,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C646 | |||
|description=CAGE_peak_at_chr10:126847417..126847439,+ | |||
|id=chr10:126847417..126847439,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.73e-24!42;CL:0000860!2.35e-23!45;CL:0000557!9.04e-20!71;CL:0000766!1.37e-19!76;CL:0002009!1.62e-18!65;CL:0000839!1.32e-17!70;CL:0000763!1.71e-17!112;CL:0000049!1.71e-17!112;CL:0002194!2.40e-17!63;CL:0000576!2.40e-17!63;CL:0000040!2.40e-17!63;CL:0000559!2.40e-17!63;CL:0000115!2.46e-10!35;CL:0002139!8.45e-10!24;CL:0000071!6.31e-09!18;CL:0002546!6.31e-09!18;CL:0002078!2.36e-08!44;CL:0000222!3.76e-08!119;CL:0000213!1.17e-07!57;CL:0000215!1.17e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-38;33!CL:0002057;1.49e-38;33!CL:0000473;9.47e-28;39!CL:0000234;9.47e-28;39!CL:0000576;6.64e-23;48!CL:0000766;3.39e-19;69!CL:0002139;4.91e-13;24!CL:0000071;7.20e-11;18!CL:0000763;1.06e-09;100!CL:0000115;1.02e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.95e-45,42;CL:0002057,8.95e-45,42;CL:0000473,7.46e-40,48;CL:0000234,7.46e-40,48;CL:0000766,2.76e-36,72;CL:0000557,6.14e-35,67;CL:0002009,1.69e-31,61;CL:0000839,5.21e-30,66;CL:0002194,4.54e-29,59;CL:0000576,4.54e-29,59;CL:0000040,4.54e-29,59;CL:0000559,4.54e-29,59;CL:0000763,4.09e-27,108;CL:0000049,4.09e-27,108;CL:0000738,4.66e-16,136;CL:0000037,3.60e-14,168;CL:0002032,4.86e-14,161;CL:0000837,4.86e-14,161;CL:0002031,8.32e-14,120;CL:0002139,3.07e-13,24;CL:0000988,3.23e-13,177;CL:0000071,1.95e-11,18;CL:0002546,1.95e-11,18;CL:0002087,4.94e-11,115;CL:0000115,9.06e-11,36;CL:0002078,1.91e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002057;9.47e-33;42!CL:0002546;7.20e-11;18!CL:0000049;1.40e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.76e-19!216;UBERON:0002371!1.01e-15!80;UBERON:0002193!4.68e-15!112;UBERON:0001474!2.25e-14!86;UBERON:0002390!1.10e-13!102;UBERON:0003061!1.10e-13!102;UBERON:0002204!4.51e-13!167;UBERON:0004765!2.05e-11!101;UBERON:0001434!2.05e-11!101;UBERON:0002405!5.44e-11!115;UBERON:0000467!9.75e-11!625;UBERON:0000468!1.22e-10!659;UBERON:0000480!1.60e-10!626;UBERON:0001986!6.31e-09!18;UBERON:0004638!6.31e-09!18;UBERON:0004852!6.31e-09!18;UBERON:0000055!1.20e-08!69;UBERON:0002050!3.25e-08!605;UBERON:0005423!3.25e-08!605;UBERON:0000923!5.55e-08!604;UBERON:0005291!5.55e-08!604;UBERON:0006598!5.55e-08!604;UBERON:0002532!5.55e-08!604;UBERON:0002049!8.46e-08!79;UBERON:0007798!8.46e-08!79;UBERON:0000922!1.51e-07!612;UBERON:0004535!2.15e-07!110;UBERON:0001981!2.43e-07!60;UBERON:0007500!2.43e-07!60;UBERON:0004537!2.43e-07!60;UBERON:0006965!2.43e-07!60;UBERON:0004872!5.99e-07!84;UBERON:0001009!7.20e-07!113;UBERON:0000487!7.69e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.20e-11;18!UBERON:0001986;7.20e-11;18!UBERON:0004852;7.20e-11;18!UBERON:0000487;2.96e-08;22!UBERON:0006914;7.23e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-30,76;UBERON:0002405,1.22e-29,93;UBERON:0002193,1.30e-28,108;UBERON:0001474,1.34e-28,82;UBERON:0003081,2.97e-27,203;UBERON:0002390,1.10e-25,98;UBERON:0003061,1.10e-25,98;UBERON:0004765,1.13e-24,90;UBERON:0001434,1.10e-20,100;UBERON:0002204,1.63e-13,167;UBERON:0000926,4.57e-13,315;UBERON:0004120,4.57e-13,315;UBERON:0006603,4.57e-13,315;UBERON:0004638,1.95e-11,18;UBERON:0001986,1.95e-11,18;UBERON:0004852,1.95e-11,18;UBERON:0000055,7.10e-10,68;UBERON:0000487,1.07e-08,22;UBERON:0002049,1.30e-07,78;UBERON:0007798,1.30e-07,78;UBERON:0007500,2.59e-07,59;UBERON:0001981,2.59e-07,59;UBERON:0004537,2.59e-07,59;UBERON:0006965,2.59e-07,59;UBERON:0006914,3.07e-07,25 | |||
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| |||
|short_description=p@chr10:126847417..126847439,+ | |||
}} |
Revision as of 05:29, 11 January 2014
Short description: | p@chr10:126847417..126847439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126847417..126847439, + |
Coexpression cluster: | C646_CD14_Mast_vagina_thymus_MCF7_immature_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.95e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.95e-45 | 42 |
defensive cell | 7.46e-40 | 48 |
phagocyte | 7.46e-40 | 48 |
myeloid leukocyte | 2.76e-36 | 72 |
granulocyte monocyte progenitor cell | 6.14e-35 | 67 |
macrophage dendritic cell progenitor | 1.69e-31 | 61 |
myeloid lineage restricted progenitor cell | 5.21e-30 | 66 |
monopoietic cell | 4.54e-29 | 59 |
monocyte | 4.54e-29 | 59 |
monoblast | 4.54e-29 | 59 |
promonocyte | 4.54e-29 | 59 |
myeloid cell | 4.09e-27 | 108 |
common myeloid progenitor | 4.09e-27 | 108 |
leukocyte | 4.66e-16 | 136 |
hematopoietic stem cell | 3.60e-14 | 168 |
hematopoietic oligopotent progenitor cell | 4.86e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.86e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 8.32e-14 | 120 |
endothelial cell of vascular tree | 3.07e-13 | 24 |
hematopoietic cell | 3.23e-13 | 177 |
blood vessel endothelial cell | 1.95e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.95e-11 | 18 |
nongranular leukocyte | 4.94e-11 | 115 |
endothelial cell | 9.06e-11 | 36 |
meso-epithelial cell | 1.91e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-30 | 76 |
immune system | 1.22e-29 | 93 |
hemolymphoid system | 1.30e-28 | 108 |
bone element | 1.34e-28 | 82 |
lateral plate mesoderm | 2.97e-27 | 203 |
hematopoietic system | 1.10e-25 | 98 |
blood island | 1.10e-25 | 98 |
skeletal element | 1.13e-24 | 90 |
skeletal system | 1.10e-20 | 100 |
musculoskeletal system | 1.63e-13 | 167 |
mesoderm | 4.57e-13 | 315 |
mesoderm-derived structure | 4.57e-13 | 315 |
presumptive mesoderm | 4.57e-13 | 315 |
blood vessel endothelium | 1.95e-11 | 18 |
endothelium | 1.95e-11 | 18 |
cardiovascular system endothelium | 1.95e-11 | 18 |
vessel | 7.10e-10 | 68 |
simple squamous epithelium | 1.07e-08 | 22 |
vasculature | 1.30e-07 | 78 |
vascular system | 1.30e-07 | 78 |
epithelial tube open at both ends | 2.59e-07 | 59 |
blood vessel | 2.59e-07 | 59 |
blood vasculature | 2.59e-07 | 59 |
vascular cord | 2.59e-07 | 59 |
squamous epithelium | 3.07e-07 | 25 |