FFCP PHASE1:Hg19::chr10:134260508..134260546,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C373 | |||
|description=CAGE_peak_at_chr10:134260508..134260546,+ | |||
|id=chr10:134260508..134260546,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.61e-11!254;CL:0000223!2.02e-09!59;CL:0002076!5.02e-09!43;CL:0000791!3.08e-07!18;CL:0000789!3.08e-07!18;CL:0002420!3.08e-07!18;CL:0002419!3.08e-07!18;CL:0000790!3.08e-07!18;CL:0000037!4.66e-07!172;CL:0000566!4.66e-07!172;CL:0002368!8.74e-07!13;CL:0000988!9.49e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.50e-08;13!CL:0002159;1.54e-07;14!CL:0002076;1.73e-07;42!CL:0000240;2.36e-07;6!CL:0000311;2.36e-07;6!CL:0000079;2.36e-07;6!CL:0000237;2.36e-07;6!CL:0002577;4.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.59e-12,253;CL:0002076,9.36e-10,42;CL:0002368,8.63e-09,13;CL:0000223,1.58e-08,58;CL:0002159,1.83e-07,14;CL:0000240,3.30e-07,6;CL:0000311,3.30e-07,6;CL:0000079,3.30e-07,6;CL:0000237,3.30e-07,6;CL:0000036,3.30e-07,6;CL:0000357,3.30e-07,6;CL:0000114,3.30e-07,6;CL:0002577,3.78e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;2.36e-07;6!CL:0000114;2.36e-07;6 | |||
|ontology_enrichment_disease=DOID:305!1.23e-14!106;DOID:162!3.85e-14!235;DOID:14566!4.78e-13!239;DOID:1240!5.07e-12!39;DOID:8692!3.64e-11!31;DOID:2531!8.80e-10!51;DOID:0060083!8.80e-10!51;DOID:1749!4.94e-09!14;DOID:0050687!7.22e-09!143;DOID:0050686!2.18e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.10e-09;14!DOID:8692;3.77e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.95e-11,106;DOID:1749,1.56e-09,14;DOID:162,6.49e-08,235;DOID:14566,1.71e-07,239;DOID:8692,2.59e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.42e-11!169;UBERON:0000925!1.42e-11!169;UBERON:0006595!1.42e-11!169;UBERON:0000065!3.40e-11!53;UBERON:0000077!7.26e-10!130;UBERON:0001004!1.33e-09!72;UBERON:0001041!2.51e-09!98;UBERON:0000072!3.42e-09!46;UBERON:0004921!8.04e-09!129;UBERON:0004185!8.04e-09!129;UBERON:0001557!2.52e-08!19;UBERON:0001007!4.38e-08!155;UBERON:0001555!4.38e-08!155;UBERON:0007026!4.38e-08!155;UBERON:0008947!9.46e-08!38;UBERON:0003258!9.46e-08!38;UBERON:0001737!2.05e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.57e-11;9!UBERON:0001557;1.57e-11;9!UBERON:0000065;1.16e-08;44!UBERON:0000072;6.18e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.91e-12,9;UBERON:0000065,6.73e-10,54;UBERON:0001557,3.93e-09,19;UBERON:0000072,2.57e-08,47;UBERON:0001004,3.49e-08,74;UBERON:0008947,9.74e-08,38;UBERON:0003258,9.74e-08,38;UBERON:0004119,6.21e-07,160;UBERON:0000925,6.21e-07,160;UBERON:0006595,6.21e-07,160;UBERON:0005631,6.31e-07,14;UBERON:0000158,6.31e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,1.09220686065086,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,2.71085326900425,5.54631015250181,0.154934401160603,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0,0,1.09227722252426,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,1.12101712596307,0.263384084775077,2.360517241366,1.96505381374582,1.43921049299656,0.334372990781356,0,1.4203434172042,0,0.334231370655521,0.883817722424512,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,1.80881695064044,0.276350017785848,1.44901542867526,0.444859689486181,2.1403266247177,2.09071047609954,0.566546713487831,1.53288197440768,0.68725489096526,1.77113784413652,0.637130828648193,0,1.90090408889675,0.301150238155546,0.76791966692651,1.24930726552346,0.473554504088034,0.821127996921047,1.00803371612366,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0,4.00724817121796,4.44941331341315,0,0,0.398873881556595,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.573609190778008,0,0,0.232387885739037,0,0,0,1.56449532329816,0.643240938192885,0,0,0,2.36613600079688,1.85443159085912,1.44606617930089,1.7647035637183,2.17879444092406,1.42362371466658,0.808987848960987,1.76599318612811,1.53898862778556,0,0,0,0,0,0,0,0,1.35287282397425,0,1.97550513735526,4.49607013030478,1.00528972411631,1.574003567695,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0.246217006087397,0,0.148631162288728,0,1.6798212819886,0.425325291727159,0,0,0.766765358330422,0,0.264145302039678,0,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,3.25572963234866,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.672510863961164,0.985153801009636,0.646882724578552,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0.343143423810856,0.82707210449155,0.862856803274467,0.533637789017222,2.42502057157008,3.32870879020994,4.83824469327489,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,1.60405176242628,1.93370076765382,0,0,0,0,0.308061348417659,1.56869953835371,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0.501689773854853,0.764628819135115,0,0.447749509444357,0,0,0,0,0.325378394664303,0.103041011647722,0,0,3.44559322797703,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0,0.991709492165869,1.92190067365106,4.33883222481586,2.8324178639554,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.430234056612155,0.294747123039363,0.35667105148125,0,0,0,0,0,1.63577591633371,2.01090682660736,2.17781969722645,0,0.86101074534246,0,1.7737206141467,0.459446800413919,1.01489521846434,0,0,0.714695326373367,0.411362273086194,0.648473311192717,0,0.79312517629427,0.213648142254946,0,0.980160863924127,0.185803175125719,0.144269212976445,0.284567373393656,1.27541018183058,2.19537308576098,0.766021480529467,4.23347165447766,1.62310970137278,3.08876895924805,1.82587743226554,1.88015874927628,0,2.37008488922245,1.1241165257259,0.605399121573143,2.12923118845163,0.343505344755765,0.921722292925374,1.3420566473545,0.500547425135725,6.25241905286529,1.9488432172667,0,0.811367035427949,0.33307196799782,0,3.7428108081644,0,0,0.222886768554957,0,0.47748896947538,2.07875276582847,1.22864280839693,0,0,0,0,4.01138275443188,0,0,0,0,0.123084805461069,0,0.449341755736634,3.04335996948536,0.511572370226872,0.591860433821602,0,0,0,0,0,0.520855522170466,0,0.724999575434793,2.50345586228099,0,6.14607972596635,1.37897349296586,0,0,0,0,0,0,0,0,1.30726156222788,0.697118721393016,0.0769502585037971,0,0,0.807818799687949,0.217294743844016,0.31900115973192,0.183195186803725,1.06606955203727,0,0.784901281975124,0,0.676786981851542,1.17637520590644,0.839107934879214,0.569261198172555,0.476809736941136,0.843992258112108,0.652931232636591,0,0.216388639742091,0.995261931078505,0.176915129006678,1.83309043480088,0,0,0,0.067401132980677,0,0,0.182454789215666,1.9566461893209,0.728341138602278,0.394584402849391,1.20990716048664,0,0,0,0.103688191397247,3.32326936353593,1.323967823502,1.56966459203613,1.19472429772959,0.284609546029793,0,0.347119476670262,0.881931576729399,29.4260118241761,0.17472666824203,0.171986032471617,1.16107597546902,1.46178634172371,1.06750094169172,0.58193409893051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| |||
|short_description=p@chr10:134260508..134260546,+ | |||
}} |
Revision as of 05:40, 11 January 2014
Short description: | p@chr10:134260508..134260546, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134260508..134260546, + |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.59e-12 | 253 |
endo-epithelial cell | 9.36e-10 | 42 |
respiratory epithelial cell | 8.63e-09 | 13 |
endodermal cell | 1.58e-08 | 58 |
general ecto-epithelial cell | 1.83e-07 | 14 |
stratified squamous epithelial cell | 3.30e-07 | 6 |
keratin accumulating cell | 3.30e-07 | 6 |
stratified epithelial cell | 3.30e-07 | 6 |
keratinizing barrier epithelial cell | 3.30e-07 | 6 |
epithelial fate stem cell | 3.30e-07 | 6 |
stratified epithelial stem cell | 3.30e-07 | 6 |
surface ectodermal cell | 3.30e-07 | 6 |
placental epithelial cell | 3.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.91e-12 | 9 |
respiratory tract | 6.73e-10 | 54 |
upper respiratory tract | 3.93e-09 | 19 |
segment of respiratory tract | 2.57e-08 | 47 |
respiratory system | 3.49e-08 | 74 |
respiratory primordium | 9.74e-08 | 38 |
endoderm of foregut | 9.74e-08 | 38 |
endoderm-derived structure | 6.21e-07 | 160 |
endoderm | 6.21e-07 | 160 |
presumptive endoderm | 6.21e-07 | 160 |
extraembryonic membrane | 6.31e-07 | 14 |
membranous layer | 6.31e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.95e-11 | 106 |
squamous cell carcinoma | 1.56e-09 | 14 |
cancer | 6.49e-08 | 235 |
disease of cellular proliferation | 1.71e-07 | 239 |
myeloid leukemia | 2.59e-07 | 31 |