FFCP PHASE1:Hg19::chr11:66360548..66360564,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25579 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NVE4 | |||
|association_with_transcript=0bp_to_ENST00000333861,NM_018219,uc001oiq.3_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_CCDC87_5end | |||
|id=chr11:66360548..66360564,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.48e-10;2!CL:0000632;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.19e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10!UBERON:0006215;2.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.24e-16!115;UBERON:0001049!1.79e-14!57;UBERON:0005068!1.79e-14!57;UBERON:0006241!1.79e-14!57;UBERON:0007135!1.79e-14!57;UBERON:0005743!1.92e-14!86;UBERON:0000955!5.09e-14!69;UBERON:0006238!5.09e-14!69;UBERON:0001017!6.14e-14!82;UBERON:0002616!8.77e-14!59;UBERON:0000073!1.80e-13!94;UBERON:0001016!1.80e-13!94;UBERON:0003075!2.48e-13!86;UBERON:0007284!2.48e-13!86;UBERON:0002346!4.97e-13!90;UBERON:0002780!8.37e-13!41;UBERON:0001890!8.37e-13!41;UBERON:0006240!8.37e-13!41;UBERON:0003080!2.69e-12!42;UBERON:0003056!8.80e-11!61;UBERON:0001893!2.15e-10!34;UBERON:0002020!3.20e-10!34;UBERON:0003528!3.20e-10!34;UBERON:0000153!6.21e-10!129;UBERON:0007811!6.21e-10!129;UBERON:0000033!8.31e-10!123;UBERON:0002791!1.42e-09!33;UBERON:0001869!3.09e-09!32;UBERON:0004121!7.93e-09!169;UBERON:0000924!8.52e-09!173;UBERON:0006601!8.52e-09!173;UBERON:0001950!5.47e-07!20;UBERON:0002619!5.74e-07!22;UBERON:0002308!6.48e-07!9;UBERON:0000125!6.48e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;2.71e-19;1!UBERON:0009899;2.71e-19;1!UBERON:0002021;2.33e-15;5!UBERON:0000473;3.52e-10;8!UBERON:0003135;1.20e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,4.69e-19,1;UBERON:0009899,4.69e-19,1;UBERON:0002021,2.51e-15,5;UBERON:0000473,3.52e-10,8;UBERON:0003135,1.20e-07,11 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.5062593682237,0.728590576585084,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0.0920498986422993,0,0.355009592516614,0,0,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0.34779121492523,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,0.431255149719035,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,1.10273068709225,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0,0.262379999988587,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0.442317039724898,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.146178634172371,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0,0.316553979779393,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.209818352539992,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.221858103073705,0.434674820589684,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0.344429959321631,0,0.184105950251841,0.139879507719444,0,0.255788742607303,0,0.471797825567689,0,0,0,0.371807292777007,0,0,0.0788617450012534,0,0,0.3062454773532,0.385375350578757,1.41696576325585,0.319267718114302,0.615349092722265,0,1.03735878696327,0.484426936895553,0,0.490738592505128,0,0,0,0,0,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0,0,0.607838261565552,0,0,0.380494861163441,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,0.40781839786099,0.263091094251396,0,0.111231401892069,0,0.314231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0.286679166302903,0.157771562193185,0.407948941145488,0.436350690340377,0,0,0,0,0.252332849670158,0.327796715891087,0,0,0,0.18378979906969,0,3.10692662694782,4.82335434281121,0,0.20686599172379,0,0.2380644314637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| |||
|short_description=p2@CCDC87 | |||
}} |
Revision as of 08:51, 11 January 2014
Short description: | p2@CCDC87 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC87_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000333861, NM_018219, uc001oiq.3_5end |
EntrezGene: | CCDC87 |
HGNC: | 25579 |
UniProt: | Q9NVE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital pole | 4.69e-19 | 1 |
pole of cerebral hemisphere | 4.69e-19 | 1 |
occipital lobe | 2.51e-15 | 5 |
testis | 3.52e-10 | 8 |
male reproductive organ | 1.20e-07 | 11 |