FFCP PHASE1:Hg19::chr11:71825886..71825904,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3795 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENST00000542161_5end | |||
|description=CAGE_peak_1_at_FOLR3_5end | |||
|id=chr11:71825886..71825904,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.17e-12!43;CL:0000144!2.53e-12!625;CL:0000548!6.90e-11!679;CL:0000004!6.90e-11!679;CL:0000255!6.90e-11!679;CL:0000220!8.71e-11!246;CL:0000012!1.26e-10!682;CL:0002321!1.60e-10!248;CL:0002371!2.56e-10!591;CL:0002159!1.80e-09!13;CL:0002368!3.61e-09!13;CL:0002077!1.68e-08!33;CL:0000066!4.74e-08!254;CL:0000063!5.27e-08!578;CL:0000223!1.76e-07!59;CL:0000003!2.28e-07!722;CL:0000622!4.13e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.25e-15;13!CL:0002076;2.76e-15;42!CL:0002159;1.44e-14;14!CL:0000622;5.94e-11;5!CL:0000244;7.79e-10;4!CL:0000731;7.79e-10;4!CL:0000154;4.85e-09;6!CL:0002202;3.51e-08;9!CL:0002632;3.51e-08;9!CL:0002621;5.43e-08;3!CL:0002166;5.87e-08;3!CL:0000307;1.89e-07;3!CL:0002251;4.80e-07;20!CL:0002077;5.32e-07;34!CL:0002328;6.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.01e-19,42;CL:0002368,2.17e-15,13;CL:0002159,1.34e-14,14;CL:0000223,2.65e-12,58;CL:0000622,5.60e-11,5;CL:0002321,1.33e-10,250;CL:0000066,2.53e-10,253;CL:0000244,7.90e-10,4;CL:0000731,7.90e-10,4;CL:0000154,4.62e-09,6;CL:0002077,3.03e-08,34;CL:0002202,3.41e-08,9;CL:0002632,3.41e-08,9;CL:0002621,5.38e-08,3;CL:0002166,5.88e-08,3;CL:0000068,1.91e-07,3;CL:0000069,1.91e-07,3;CL:0000307,1.91e-07,3;CL:0000377,1.91e-07,3;CL:0002251,4.57e-07,20;CL:0002328,5.94e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.13e-07;58!CL:0000377;1.89e-07;3 | |||
|ontology_enrichment_disease=DOID:2394!7.69e-11!14;DOID:120!2.47e-07!27;DOID:193!2.62e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.45e-08;3!DOID:127;8.45e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.57e-08,3;DOID:127,8.57e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003100!1.63e-07!41;UBERON:0003102!2.63e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.33e-11;12!UBERON:0001949;5.43e-08;3!UBERON:0000365;7.90e-08;5!UBERON:0004815;6.31e-07;3!UBERON:0002031;6.31e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.05e-09,99;UBERON:0001949,5.38e-08,3;UBERON:0000365,7.99e-08,5;UBERON:0004815,5.94e-07,3;UBERON:0002031,5.94e-07,3 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0,0,0,4.42203911398782,0,0,0,0,0,0,0,0,0.602694528023977,2.19093027116212,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,4.2168828628955,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0.795285947051099,0,0,0,0,0,9.4716774956061,1.48313777113772,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,7.28250494472703,0,0,0,0,0,0,0,0,0,0,0,1.24864030732128,1.1409436430889,1.79338416662161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0.45071417671979,0,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,1.0126579934476,0.0974370051611986,0.252433774244115,0.460249493211497,0,0,0.201504196455281,0,32.8543450377605,18.8194823207676,19.7895170818413,0,0,0,0.310983165046111,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8888199251133,3.37205259772859,10.9576579928678,0.833296006426766,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0.936017060556951,0.297262324577456,29.9948268757686,31.9166043577833,11.3420077793909,3.49278238541108,2.3250715081117,2.68367875415648,0,0,0,0,0,0.063497894292169,0,0,3.4214489204541,0,0,0,0,0,0,0.129271715757778,0,0,8.24408161413099,4.16029747645464,0,0,0,0,0,0,0,0,0,10.2489388200259,12.2014684204041,1.79951384127703,1.2162378064119,0,0,0,0,0,1.01346914667305,0.205476322550383,1.79060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.368738337083406,3.30157734978715,0,0,0,0,0,0,0,0,0.744323423456331,0,0.561320188866147,1.40953064181271,0,0.160853921143607,0,0.308419387605311,1.42049380250502,1.47828880824856,0,1.97557643381931,0,30.6774899564026,20.7182225105767,0,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3080511260475,0.328014645699706,1.30151357865721,0.103041011647722,0,0,45.3669775016976,42.2539159923739,0,0,0,0,0,0,0,0,0,23.8010278119808,13.0689245808272,10.5918551370505,9.40767361956614,0.464845549297286,0.62962469366128,1.3940745403212,0,1.06461206063404,0,0,0,0.372158369359667,0,0.190630193923825,0.511795582622668,0,0,0,0.179872457583315,0,0,1.2130948894399,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,2.31510213706675,0,0.405820753925408,0,0,0,0,0.35667105148125,3.54761064070598,1.26664581178598,0.329294892959902,0,0,7.89021324349199,10.0545341330368,8.71127878890581,0.188287601553558,14.6371826708218,10.1082885400575,20.8412172162238,14.4725742130384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0.306806047506464,0,3.11039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37396390102793,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.435296032902013,0,0,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,8.14499402630569,48.396403507271,13.3900817644858,1.19730191562487,0,1.36310417428337,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,1.10961172300523,4.73507513187723,1.76097531226803,0.889811221596536,5.94984177832001,1.51230923763239,0,0.887130899937803,0.159296767163702,6.29724357029046,0.621051827505038,1.24411862352257,1.59505028734797,0.521745061811734,0.901545653983311,6.47368860686952,0.813741466409323,2.18218391043071,0.322231671127465,2.78420255927096,1.19428766609585,0.400027764663154,0.686791410365586,2.02049693259551,0,0,0,0,0.453411851024545,0.926089897295336,0,1.4327107286519,0,0,5.65405267026819,5.98033518639836,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,3.86622495528866,18.0444564958083,16.7960860208903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02405645854205,0,2.20114318226015,0,1.90691047733584,0,0,0,1.21023041222112,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72989095493466,2.0486217251274,2.76503864725637,0,2.12997601315018,2.47118873801557,0,0.22910686854405,3.41227024230752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,6.35210769088245,0,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,3.8936390591141,0,0,0,0.101988829741982,0.534434810531121,0.918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@FOLR3 | |||
}} |
Revision as of 09:14, 11 January 2014
Short description: | p1@FOLR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOLR3_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000542161_5end |
EntrezGene: | FOLR3 |
HGNC: | 3795 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.01e-19 | 42 |
respiratory epithelial cell | 2.17e-15 | 13 |
general ecto-epithelial cell | 1.34e-14 | 14 |
endodermal cell | 2.65e-12 | 58 |
acinar cell | 5.60e-11 | 5 |
embryonic cell | 1.33e-10 | 250 |
epithelial cell | 2.53e-10 | 253 |
transitional epithelial cell | 7.90e-10 | 4 |
urothelial cell | 7.90e-10 | 4 |
protein secreting cell | 4.62e-09 | 6 |
ecto-epithelial cell | 3.03e-08 | 34 |
epithelial cell of tracheobronchial tree | 3.41e-08 | 9 |
epithelial cell of lower respiratory tract | 3.41e-08 | 9 |
gingival epithelial cell | 5.38e-08 | 3 |
epithelial cell of Malassez | 5.88e-08 | 3 |
duct epithelial cell | 1.91e-07 | 3 |
branched duct epithelial cell | 1.91e-07 | 3 |
tracheal epithelial cell | 1.91e-07 | 3 |
tracheoblast | 1.91e-07 | 3 |
epithelial cell of alimentary canal | 4.57e-07 | 20 |
bronchial epithelial cell | 5.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.05e-09 | 99 |
gingival epithelium | 5.38e-08 | 3 |
urothelium | 7.99e-08 | 5 |
lower respiratory tract epithelium | 5.94e-07 | 3 |
epithelium of bronchus | 5.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.57e-08 | 3 |
leiomyoma | 8.57e-08 | 3 |