FFCP PHASE1:Hg19::chr11:101981353..101981380,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10413 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |||
|TSSclassifier=strong | |||
|UniProt=P46937,F5GWC5,F5H202 | |||
|association_with_transcript=143bp_to_ENST00000345877,ENST00000445250,ENST00000537274,uc001pgs.2,uc001pgt.2,uc001pgu.2,uc001pgv.2_5end | |||
|coexpression_cluster_id=C2089 | |||
|description=CAGE_peak_5_at_YAP1_5end | |||
|id=chr11:101981353..101981380,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.70e-13!254;CL:0000055!6.00e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.03e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.29e-15!106;DOID:0050687!2.88e-15!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.17e-15,106;DOID:0050687,2.51e-14,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.37e-20!169;UBERON:0000925!2.37e-20!169;UBERON:0006595!2.37e-20!169;UBERON:0001007!3.64e-18!155;UBERON:0001555!3.64e-18!155;UBERON:0007026!3.64e-18!155;UBERON:0000481!2.52e-17!347;UBERON:0003104!3.08e-16!238;UBERON:0009142!3.08e-16!238;UBERON:0000077!2.43e-13!130;UBERON:0000468!7.17e-13!659;UBERON:0004921!8.49e-12!129;UBERON:0004185!8.49e-12!129;UBERON:0002100!1.07e-11!216;UBERON:0001048!2.70e-11!168;UBERON:0000062!5.44e-11!511;UBERON:0000922!6.43e-10!612;UBERON:0005156!2.10e-09!59;UBERON:0000990!2.10e-09!59;UBERON:0000475!3.83e-09!365;UBERON:0000467!4.11e-09!625;UBERON:0000480!6.86e-09!626;UBERON:0000466!9.99e-09!126;UBERON:0000064!1.55e-08!219;UBERON:0002050!2.19e-08!605;UBERON:0005423!2.19e-08!605;UBERON:0000923!4.22e-08!604;UBERON:0005291!4.22e-08!604;UBERON:0006598!4.22e-08!604;UBERON:0002532!4.22e-08!604;UBERON:0000464!5.78e-08!104;UBERON:0005256!6.96e-08!143;UBERON:0001737!1.03e-07!9;UBERON:0004923!1.05e-07!57;UBERON:0004458!1.17e-07!49;UBERON:0001004!1.48e-07!72;UBERON:0003133!1.65e-07!48;UBERON:0002323!3.66e-07!46;UBERON:0005911!9.27e-07!82;UBERON:0000161!9.31e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.94e-08;9!UBERON:0001557;4.94e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.98e-19,160;UBERON:0000925,2.98e-19,160;UBERON:0006595,2.98e-19,160;UBERON:0001007,3.14e-17,145;UBERON:0001555,3.14e-17,145;UBERON:0007026,3.14e-17,145;UBERON:0004921,1.04e-10,118;UBERON:0001048,1.10e-09,160;UBERON:0005156,5.01e-09,59;UBERON:0000990,5.01e-09,59;UBERON:0002100,5.33e-09,199;UBERON:0004923,6.00e-09,66;UBERON:0001737,6.06e-08,9;UBERON:0003104,1.23e-07,160;UBERON:0009142,1.23e-07,160;UBERON:0001004,2.71e-07,74;UBERON:0003133,4.33e-07,48;UBERON:0000161,7.27e-07,36;UBERON:0004458,8.41e-07,49;UBERON:0003102,9.37e-07,99 | |||
|phase1_expression=2.36181893051724,3.63970890614671,2.53717927372748,6.00439790118782,3.5756887554183,2.61701557230111,0,2.52687949370732,1.30592814099919,4.91467873003018,2.79120467188971,3.27662058195258,2.37390280405608,2.59909341216098,1.65698687863958,1.34465029290355,1.20538905604795,2.92124036154949,1.46379839637152,1.23121058076788,2.24400760368678,1.56727360739044,3.14859585844162,2.46373965131192,2.38531015230125,0,0,0,0,0,0.309632246632152,2.75826367343678,0.90361775633475,1.47901604066715,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.30152611318355,2.1686349143074,0,4.05570253090306,1.5905718941022,1.94653948121054,2.55244006342983,2.4390233720882,2.0202000709419,2.5540919722054,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,0,2.75118041940067,1.04497483268405,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.732186172644509,0.367663080345869,0,1.25019619597712,1.12264686313085,1.91439516821648,0,0,1.09921046358244,0,0,1.3082821564276,2.98183171017191,2.40597972162702,1.45650098894541,0.573673241497627,3.90135220418193,6.16745360156538,1.06748995729705,2.22000793575444,5.29058760179603,1.48181739276657,2.61539044981534,2.57307626996383,1.15235184896,4.45210720484214,1.5608003841516,1.71141546463335,2.24173020827702,2.93586246609412,2.26622122115384,1.82586048712923,3.67477508258808,5.40470996171779,5.6829179646671,3.56400857184616,3.4617370098998,0.910161361938026,0,5.05008341862199,5.12985931475053,2.49357703935765,3.5118209670467,4.29082914118628,5.40857012063748,2.26864366320042,1.97328599257748,2.98980344345994,1.90738711043606,1.20036438433761,1.8549455262919,2.31876486041066,2.23340227597908,1.35021065793013,1.85130309806277,1.00973509697646,3.12969655383818,4.36444353410792,1.06502877754984,1.81353776809752,2.20428770003634,3.67195621010264,1.90922284413584,3.15485054927904,5.12289565744301,3.18071443971565,4.29917588617218,3.52447587052259,3.28017106138317,2.91981887260664,3.12899064659632,2.57296375277154,1.38134921352481,1.85747171212792,1.44375896333917,19.5206220065742,21.9160097101532,21.2089706297464,18.9705633099718,23.9667388501647,18.5071082906655,20.8988527648255,13.1468381633982,12.3119090222845,0,1.40241773803446,2.4694440679884,1.47008711385542,0,1.96565443335525,0,0,7.74827162821615,2.91665277507493,1.31700342490351,0,2.11110842064425,2.96283024507295,1.3032332212413,0,4.3299402607582,2.89826012437692,2.93521735589554,1.01056513432752,0,0.570762456703795,0,1.71697232418975,0,0,0,4.68669169933885,2.68771405118175,2.97727704209012,3.04498977189684,3.48760726216754,3.06706143332169,0,0,0.207328115540772,0,0.12624243342638,1.20645999155121,1.14596527667483,2.34434894420094,1.71072446022705,0.925447434329912,1.50171528921959,0.571652865261156,3.1396703616701,2.61576041299968,1.39342743059805,1.93907573636667,3.57656445851882,1.690605505112,2.6593811658487,10.4007436911366,1.54324424557285,1.41849132023278,2.93064396917709,1.71573592389777,1.08524321078289,1.64648067356154,1.30294473717494,3.55391948742546,3.95975936466715,3.61727252471503,2.61460037580088,5.99837947092342,0,0,0,2.39624855491583,5.7430967917057,2.85273810081437,2.17171960001369,2.05476322550383,2.86497541183833,0,0,0,0,0.254094624222463,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,2.33113834266366,1.50051156317903,1.62759014219841,2.70362119990049,2.49800584316026,5.20417969611984,5.15422225967938,1.80567659836631,2.27407504055985,4.1389228517002,1.99267679560631,1.84369168541703,2.78027566297865,1.17480694477644,1.71571711905428,0,0,0,1.81876542867756,3.32870879020994,6.65258645325297,2.48107807818777,1.68808170616869,5.3325417942284,3.45975702990393,6.14048698880044,4.18220194973379,1.48418066444991,2.31314540703983,1.42049380250502,2.13530605635904,1.55776328755086,3.25389059687886,8.94359926978004,3.20810352485256,4.8802924136025,2.06666006696292,1.45672934405374,2.88473712910733,0.902399225814824,1.92538342761037,5.49044838423799,2.92278449306521,2.42768746453614,0,0.170093705276516,0.431831832204279,0,1.35473218771926,2.00675909541941,1.78413391131527,0.831076008928724,3.35812132083267,0,0,4.35965212697862,1.31205858279882,0.976135183992909,3.19427136107939,2.38080608527693,1.48517099857058,1.72279661398852,0.650060246036521,6.42735719376638,2.51343867559517,1.54048617114644,2.91656981979646,2.20538515975249,1.71872391789238,2.46528379654188,3.23861184181183,0.801288320820636,2.97512847649761,3.0750410778417,1.91419068741876,7.18220244074405,5.11330104227014,2.51849877464512,3.485186350803,2.15623506123262,3.19383618190213,1.73986598415015,1.11194531462352,2.14687330112987,0.744316738719335,2.84741482246853,2.66882271493355,3.07077349573601,2.1396949401696,1.90921948755562,0,1.43897966066652,1.92175920815238,4.3590588867904,1.01091240786658,0,2.1062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| |||
|short_description=p5@YAP1 | |||
}} |
Revision as of 10:00, 11 January 2014
Short description: | p5@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_YAP1_5end |
Coexpression cluster: | C2089_pharyngeal_epidermoid_Hep2_rectal_Prostate_gastric_Adipocyte |
Association with transcript: | 143bp_to_ENST00000345877, ENST00000445250, ENST00000537274, uc001pgs.2, uc001pgt.2, uc001pgu.2, uc001pgv.2_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | P46937F5GWC5F5H202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.03e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.98e-19 | 160 |
endoderm | 2.98e-19 | 160 |
presumptive endoderm | 2.98e-19 | 160 |
digestive system | 3.14e-17 | 145 |
digestive tract | 3.14e-17 | 145 |
primitive gut | 3.14e-17 | 145 |
subdivision of digestive tract | 1.04e-10 | 118 |
primordium | 1.10e-09 | 160 |
reproductive structure | 5.01e-09 | 59 |
reproductive system | 5.01e-09 | 59 |
trunk | 5.33e-09 | 199 |
organ component layer | 6.00e-09 | 66 |
larynx | 6.06e-08 | 9 |
mesenchyme | 1.23e-07 | 160 |
entire embryonic mesenchyme | 1.23e-07 | 160 |
respiratory system | 2.71e-07 | 74 |
reproductive organ | 4.33e-07 | 48 |
orifice | 7.27e-07 | 36 |
body cavity or lining | 8.41e-07 | 49 |
surface structure | 9.37e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.17e-15 | 106 |
cell type cancer | 2.51e-14 | 143 |