FFCP PHASE1:Hg19::chr12:2079855..2079865,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=775 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1390 | |||
|TSSclassifier=weak | |||
|UniProt=F5H0X0 | |||
|association_with_transcript=-86bp_to_ENST00000543114_5end | |||
|coexpression_cluster_id=C3265 | |||
|description=CAGE_peak_12_at_CACNA1C_5end | |||
|id=chr12:2079855..2079865,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.32e-41;4!UBERON:0007284;3.32e-41;4!UBERON:0000358;1.08e-19;1!UBERON:0004140;1.30e-19;1!UBERON:0010227;1.56e-19;1!UBERON:0006603;7.90e-12;65 | |||
|ontology_enrichment_disease=DOID:114!6.75e-17!2;DOID:178!3.05e-09!1;DOID:326!3.05e-09!1;DOID:3978!3.05e-09!1;DOID:3394!3.05e-09!1;DOID:5844!3.05e-09!1;DOID:1287!6.74e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.18e-36;2!DOID:178;4.69e-19;1!DOID:326;4.69e-19;1!DOID:3978;4.69e-19;1!DOID:3394;4.69e-19;1!DOID:5844;4.69e-19;1!DOID:1287;6.77e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.84e-37,2;DOID:178,3.91e-19,1;DOID:326,3.91e-19,1;DOID:3978,3.91e-19,1;DOID:3394,3.91e-19,1;DOID:5844,3.91e-19,1;DOID:1287,6.18e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!1.11e-24!3;UBERON:0009751!1.11e-24!3;UBERON:0000946!1.11e-24!3;UBERON:0002523!1.11e-24!3;UBERON:0005983!1.11e-24!3;UBERON:0002165!1.11e-24!3;UBERON:0002062!1.11e-24!3;UBERON:0007280!1.11e-24!3;UBERON:0004151!1.65e-24!3;UBERON:0007100!1.77e-22!27;UBERON:0007023!8.70e-21!115;UBERON:0002081!3.30e-17!2;UBERON:0002133!3.87e-17!2;UBERON:0003103!3.07e-14!69;UBERON:0000948!1.70e-11!24;UBERON:0005498!1.70e-11!24;UBERON:0004140!1.70e-11!24;UBERON:0009881!1.70e-11!24;UBERON:0004141!1.70e-11!24;UBERON:0003084!1.70e-11!24;UBERON:0007005!1.70e-11!24;UBERON:0004139!1.70e-11!24;UBERON:0004291!1.70e-11!24;UBERON:0002134!1.60e-09!1;UBERON:0005208!1.60e-09!1;UBERON:0005946!1.60e-09!1;UBERON:0005965!1.60e-09!1;UBERON:0002078!1.60e-09!1;UBERON:0002079!2.04e-09!1;UBERON:0002135!2.40e-09!1;UBERON:0002146!2.60e-09!1;UBERON:0005623!2.60e-09!1;UBERON:0006834!3.58e-09!1;UBERON:0002084!4.54e-09!1;UBERON:0002082!4.54e-09!1;UBERON:0004706!4.54e-09!1;UBERON:0001154!4.91e-09!1;UBERON:0001153!4.91e-09!1;UBERON:0000989!5.75e-09!1;UBERON:0008811!5.75e-09!1;UBERON:0006258!5.75e-09!1;UBERON:0005876!5.75e-09!1;UBERON:0004874!5.75e-09!1;UBERON:0001301!8.49e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.25e-54;3!UBERON:0000946;1.25e-54;3!UBERON:0007100;1.43e-45;25!UBERON:0002081;1.89e-37;2!UBERON:0002133;3.28e-37;2!UBERON:0004151;2.34e-25;3!UBERON:0000948;1.02e-20;22!UBERON:0002134;8.95e-20;1!UBERON:0005208;8.95e-20;1!UBERON:0004145;8.95e-20;1!UBERON:0005946;8.95e-20;1!UBERON:0005965;8.95e-20;1!UBERON:0002078;8.95e-20;1!UBERON:0002079;1.56e-19;1!UBERON:0002135;2.71e-19;1!UBERON:0002146;2.71e-19;1!UBERON:0005623;2.71e-19;1!UBERON:0006834;4.69e-19;1!UBERON:0010313;5.86e-17;10!UBERON:0003103;2.95e-11;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.04e-54,3;UBERON:0009751,1.04e-54,3;UBERON:0000946,1.04e-54,3;UBERON:0002523,1.04e-54,3;UBERON:0005983,1.04e-54,3;UBERON:0002165,1.04e-54,3;UBERON:0002062,1.04e-54,3;UBERON:0007280,1.04e-54,3;UBERON:0007100,3.32e-42,27;UBERON:0002081,1.89e-37,2;UBERON:0010227,1.89e-37,2;UBERON:0002133,2.73e-37,2;UBERON:0004151,2.34e-25,3;UBERON:0004797,6.12e-24,7;UBERON:0002134,8.95e-20,1;UBERON:0005208,8.95e-20,1;UBERON:0005946,8.95e-20,1;UBERON:0005965,8.95e-20,1;UBERON:0002078,8.95e-20,1;UBERON:0002079,1.56e-19,1;UBERON:0002135,2.25e-19,1;UBERON:0002146,2.71e-19,1;UBERON:0005623,2.71e-19,1;UBERON:0000948,5.03e-19,24;UBERON:0005498,5.03e-19,24;UBERON:0004140,5.03e-19,24;UBERON:0009881,5.03e-19,24;UBERON:0004141,5.03e-19,24;UBERON:0003084,5.03e-19,24;UBERON:0007005,5.03e-19,24;UBERON:0004139,5.03e-19,24;UBERON:0004291,5.03e-19,24;UBERON:0006834,5.62e-19,1;UBERON:0010313,5.55e-17,10;UBERON:0002342,5.55e-17,10;UBERON:0005062,5.55e-17,10;UBERON:0003103,1.44e-16,68;UBERON:0007023,3.27e-12,114;UBERON:0001009,7.11e-10,112;UBERON:0004145,1.82e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,2.29160424011684,13.6395874669595,1.79711100449092,4.72148652950228,2.23171457441873,8.39793406084078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.706437835654626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71603825227734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7320471201727,1.58913877437726,0,0,0,0 | |||
|short_description=p12@CACNA1C | |||
}} |
Revision as of 11:28, 11 January 2014
Short description: | p12@CACNA1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CACNA1C_5end |
Coexpression cluster: | C3265_heart_umbilical_left_smooth_globus_Cardiac_neuroblastoma |
Association with transcript: | -86bp_to_ENST00000543114_5end |
EntrezGene: | CACNA1C |
HGNC: | 1390 |
UniProt: | F5H0X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 9.84e-37 | 2 |
vascular disease | 3.91e-19 | 1 |
ischemia | 3.91e-19 | 1 |
extrinsic cardiomyopathy | 3.91e-19 | 1 |
myocardial ischemia | 3.91e-19 | 1 |
myocardial infarction | 3.91e-19 | 1 |
cardiovascular system disease | 6.18e-19 | 4 |