FFCP PHASE1:Hg19::chr12:65174519..65174584,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23329 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29164 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2I9 | |||
|association_with_transcript=-4bp_to_ENST00000229088_5end | |||
|description=CAGE_peak_2_at_TBC1D30_5end | |||
|id=chr12:65174519..65174584,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.00e-25!76;CL:0000860!1.23e-21!45;CL:0000557!9.08e-21!71;CL:0002057!2.54e-20!42;CL:0002194!5.49e-20!63;CL:0000576!5.49e-20!63;CL:0000040!5.49e-20!63;CL:0000559!5.49e-20!63;CL:0000839!7.95e-20!70;CL:0002009!2.97e-19!65;CL:0000115!4.93e-15!35;CL:0002139!1.59e-13!24;CL:0000763!5.71e-13!112;CL:0000049!5.71e-13!112;CL:0002078!3.08e-12!44;CL:0000071!1.92e-11!18;CL:0002546!1.92e-11!18;CL:0000066!6.17e-11!254;CL:0000213!6.56e-07!57;CL:0000215!6.56e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.16e-17;33!CL:0002057;5.16e-17;33!CL:0000473;1.96e-16;39!CL:0000234;1.96e-16;39!CL:0002139;4.63e-16;24!CL:0000115;4.86e-15;36!CL:0000071;3.28e-14;18!CL:0000576;9.20e-13;48!CL:0000766;8.67e-12;69!CL:0002078;3.67e-09;45!CL:1000413;3.38e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.28e-25,72;CL:0000473,1.08e-23,48;CL:0000234,1.08e-23,48;CL:0000860,1.95e-21,42;CL:0002057,1.95e-21,42;CL:0000557,1.22e-19,67;CL:0000839,2.61e-19,66;CL:0002194,1.94e-18,59;CL:0000576,1.94e-18,59;CL:0000040,1.94e-18,59;CL:0000559,1.94e-18,59;CL:0000115,4.76e-18,36;CL:0002009,2.41e-17,61;CL:0002139,5.18e-16,24;CL:0000071,3.33e-14,18;CL:0002546,3.33e-14,18;CL:0002078,3.54e-14,45;CL:0000763,3.12e-13,108;CL:0000049,3.12e-13,108;CL:0000213,4.89e-08,58;CL:0000215,4.89e-08,58;CL:0000066,7.42e-08,253;CL:1000413,3.93e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-15;42!CL:0002546;3.28e-14;18!UBERON:0008947;7.88e-10;29 | |||
|ontology_enrichment_disease=DOID:305!1.10e-14!106;DOID:0050687!9.84e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.60e-11,106;DOID:0050687,3.87e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001474!5.60e-16!86;UBERON:0002371!2.76e-15!80;UBERON:0002193!7.74e-15!112;UBERON:0007023!1.78e-14!115;UBERON:0002405!2.13e-14!115;UBERON:0002390!2.92e-13!102;UBERON:0003061!2.92e-13!102;UBERON:0000467!1.33e-11!625;UBERON:0000062!1.47e-11!511;UBERON:0001986!1.92e-11!18;UBERON:0004638!1.92e-11!18;UBERON:0004852!1.92e-11!18;UBERON:0000480!2.01e-11!626;UBERON:0000922!2.54e-11!612;UBERON:0000468!7.45e-11!659;UBERON:0002050!1.05e-10!605;UBERON:0005423!1.05e-10!605;UBERON:0000923!1.54e-10!604;UBERON:0005291!1.54e-10!604;UBERON:0006598!1.54e-10!604;UBERON:0002532!1.54e-10!604;UBERON:0004765!1.62e-10!101;UBERON:0001434!1.62e-10!101;UBERON:0000487!2.16e-10!22;UBERON:0006914!1.37e-08!25;UBERON:0004921!3.41e-08!129;UBERON:0004185!3.41e-08!129;UBERON:0000926!2.77e-07!448;UBERON:0004120!2.77e-07!448;UBERON:0006603!2.77e-07!448;UBERON:0001007!7.83e-07!155;UBERON:0001555!7.83e-07!155;UBERON:0007026!7.83e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.28e-14;18!UBERON:0001986;3.28e-14;18!UBERON:0004852;3.28e-14;18!UBERON:0000487;1.32e-11;22!UBERON:0006914;1.90e-09;25!UBERON:0003915;3.38e-07;9!UBERON:0004700;3.38e-07;9!UBERON:0001917;3.38e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.26e-16,93;UBERON:0001474,1.83e-15,82;UBERON:0002371,2.17e-15,76;UBERON:0004638,3.33e-14,18;UBERON:0001986,3.33e-14,18;UBERON:0004852,3.33e-14,18;UBERON:0004765,1.17e-12,90;UBERON:0002193,3.75e-12,108;UBERON:0000487,1.16e-11,22;UBERON:0002390,2.16e-10,98;UBERON:0003061,2.16e-10,98;UBERON:0001434,6.98e-10,100;UBERON:0006914,1.69e-09,25;UBERON:0004921,2.94e-08,118;UBERON:0003081,1.33e-07,203;UBERON:0003915,3.93e-07,9;UBERON:0004700,3.93e-07,9;UBERON:0001917,3.93e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,2.75354993794233,0.383829398097213,1.23852898652861,0,0.6024118375565,0.369754010166788,0,0,0,2.76997704265939,1.40381113229099,2.17010870715852,1.34349284543955,0.32389366601898,1.03030227053675,1.59938062657521,0.755751887377619,2.18325655069035,3.0215774797739,2.87817521615278,4.33588919253145,4.02769349251011,6.40401766322752,6.14853797710322,5.86067657252252,5.16387746867061,1.35426486594342,0.941211697713023,1.36453075028923,2.02251136000576,4.89734227793444,4.17207735198922,6.39337125799041,6.92687730392104,5.78444607102732,6.81959600852311,8.41606792022894,15.3194010666608,9.9651559839292,3.76872997885115,4.69334626578181,3.9093992046921,11.502590550034,6.2607198117886,9.17740923578565,0.845021145247767,1.27562579979026,1.67726916406701,0.898629049171961,0.901061357049038,0.964353520182481,1.99508920618874,1.19350006319454,2.19196984517561,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,1.37528029272598,0.364295288292542,1.11235332835329,0.649094787309367,0.522389211897802,0.797747763113191,0,0,0,3.7764857399674,0.860234595106124,3.12426451446835,6.21838736116411,5.45349267072878,5.22724279686128,6.68783892917794,1.03366703667732,2.84613010149368,3.68192674041137,2.81980521976403,6.0821768457481,2.4406205754817,5.14728312484216,3.24056779152704,3.83988831621543,3.14341121676638,4.72968218029953,6.13266549863533,4.74632829784064,5.49605231791222,10.5424333948851,11.6334079244498,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.860413786167011,0.487894824518382,0.265059536642971,0.116193942869518,0.414644220061482,0.252320850875628,0.72995471815166,0,0,0,0,0,1.41968160047813,3.03452442140583,3.37415441836875,2.42646740011267,2.39667388501647,1.66089433377768,1.75280700608214,1.37355025587742,2.30848294167834,1.4763109092493,1.40241773803446,0.8231480226628,0,1.26755034821831,0,2.36315962672562,0,1.22988438543114,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.579652024875384,0.117408694235822,2.45422961193825,0.925971025153221,3.61482889245737,3.1608175918371,7.72637545885385,3.20082107913617,4.68008530278475,5.64798416697167,0,0,0,0,0,0,0,1.32072651019839,5.1832028885193,8.35895729818376,3.1560608356595,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0,0,0.591092280605782,0,0.385029108839245,0,0,0.773288812777695,0,0,10.4860983352606,5.9832291840805,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.620304078368662,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0.200506470303285,0.460404944679482,0,0,0,1.35359883872224,0.15403067420883,0.784349769176855,0,0,5.68666920354483,3.40187410553031,2.59099099322567,3.08454505380579,0,0,1.78413391131527,1.66215201785745,0.223874754722178,0,0,2.05160100093111,0.328014645699706,0.650756789328606,0.824328093181778,0.732555718546747,1.07262349896764,0,0.650060246036521,0,0,0.308097234229289,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0.192190067365106,0,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,1.31801321087491,0,0,0,0.229723400206959,1.01489521846434,0.764637207142375,0,0.476463550915578,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,1.38871292465715,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0.307240764308458,0,0.500547425135725,0.19538809540204,0,0,0,0,0,5.42707567183837,1.75809815126273,1.45632626099416,0,0.284136146806413,0,0,0,0,0.844016498463076,0.111308705022906,0,0,2.98871982376605,1.38141957765574,0.503865495708552,0.306806047506464,0,0,1.43789361835723,4.29650819221462,0,1.28236427328014,0,0,0,0.278304294485554,0,7.29197731038653,7.60901999966903,2.17499872630438,6.82760689712998,1.5255219017566,1.41832609060762,2.06846023944879,0.291604613383254,0,0,0.361789315876224,0,0.221158519862449,0.295547618953547,0.219385397153973,0.21787692703798,0.278847488557207,1.61595542857974,0,0.23056390438806,0.269272933229316,0.325942115766024,0,0,0,0,0,0.332423363800313,0,0,0,0,0.317873157960757,1.89898258075224,0.652931232636591,1.55488378577335,0.432777279484182,1.99052386215701,1.06149077404007,1.22206028986725,0,0,0,0.808813595768125,0,0.468528891450678,0,1.36965233252463,0.242780379534093,8.2862724598372,3.62972148145992,0,1.95878396848313,2.40517471063188,1.03688191397247,0,1.323967823502,1.2557316736289,1.1947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| |||
|short_description=p2@TBC1D30 | |||
}} |
Revision as of 14:24, 11 January 2014
Short description: | p2@TBC1D30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBC1D30_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000229088_5end |
EntrezGene: | TBC1D30 |
HGNC: | 29164 |
UniProt: | Q9Y2I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.28e-25 | 72 |
defensive cell | 1.08e-23 | 48 |
phagocyte | 1.08e-23 | 48 |
classical monocyte | 1.95e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.95e-21 | 42 |
granulocyte monocyte progenitor cell | 1.22e-19 | 67 |
myeloid lineage restricted progenitor cell | 2.61e-19 | 66 |
monopoietic cell | 1.94e-18 | 59 |
monocyte | 1.94e-18 | 59 |
monoblast | 1.94e-18 | 59 |
promonocyte | 1.94e-18 | 59 |
endothelial cell | 4.76e-18 | 36 |
macrophage dendritic cell progenitor | 2.41e-17 | 61 |
endothelial cell of vascular tree | 5.18e-16 | 24 |
blood vessel endothelial cell | 3.33e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.33e-14 | 18 |
meso-epithelial cell | 3.54e-14 | 45 |
myeloid cell | 3.12e-13 | 108 |
common myeloid progenitor | 3.12e-13 | 108 |
lining cell | 4.89e-08 | 58 |
barrier cell | 4.89e-08 | 58 |
epithelial cell | 7.42e-08 | 253 |
endothelial cell of artery | 3.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.26e-16 | 93 |
bone element | 1.83e-15 | 82 |
bone marrow | 2.17e-15 | 76 |
blood vessel endothelium | 3.33e-14 | 18 |
endothelium | 3.33e-14 | 18 |
cardiovascular system endothelium | 3.33e-14 | 18 |
skeletal element | 1.17e-12 | 90 |
hemolymphoid system | 3.75e-12 | 108 |
simple squamous epithelium | 1.16e-11 | 22 |
hematopoietic system | 2.16e-10 | 98 |
blood island | 2.16e-10 | 98 |
skeletal system | 6.98e-10 | 100 |
squamous epithelium | 1.69e-09 | 25 |
subdivision of digestive tract | 2.94e-08 | 118 |
lateral plate mesoderm | 1.33e-07 | 203 |
endothelial tube | 3.93e-07 | 9 |
arterial system endothelium | 3.93e-07 | 9 |
endothelium of artery | 3.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.60e-11 | 106 |
cell type cancer | 3.87e-07 | 143 |