FFCP PHASE1:Hg19::chr12:79371509..79371528,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11509 | |||
|TSSclassifier=strong | |||
|UniProt=F8VZY3 | |||
|association_with_transcript=-36bp_to_ENST00000551304_5end | |||
|description=CAGE_peak_9_at_SYT1_5end | |||
|id=chr12:79371509..79371528,+ | |||
|ontology_enrichment_celltype=CL:0002009!3.35e-19!65;CL:0002194!1.67e-18!63;CL:0000576!1.67e-18!63;CL:0000040!1.67e-18!63;CL:0000559!1.67e-18!63;CL:0000557!7.23e-17!71;CL:0000766!1.83e-16!76;CL:0000839!7.60e-16!70;CL:0002057!1.15e-11!42;CL:0000763!5.01e-11!112;CL:0000049!5.01e-11!112;CL:0000860!1.48e-10!45;CL:0000840!4.17e-09!5;CL:0001029!4.17e-09!5;CL:0002087!5.75e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.72e-19;39!CL:0000234;4.72e-19;39!CL:0000860;8.44e-18;33!CL:0002057;8.44e-18;33!CL:0000576;1.88e-17;48!CL:0000766;3.15e-12;69!CL:0000840;1.80e-11;5!CL:0000235;4.36e-11;6!CL:0002619;4.41e-10;3!CL:0000167;1.05e-08;1!CL:0000164;1.05e-08;1!CL:0000502;1.05e-08;1!CL:0000172;1.05e-08;1!CL:0000173;1.05e-08;1!CL:0000037;4.72e-08;1!CL:0001024;4.72e-08;1!CL:0000990;8.48e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.41e-37,59;CL:0000576,1.41e-37,59;CL:0000040,1.41e-37,59;CL:0000559,1.41e-37,59;CL:0002009,3.00e-36,61;CL:0000839,2.83e-33,66;CL:0000557,9.88e-33,67;CL:0000766,3.06e-30,72;CL:0000473,4.21e-25,48;CL:0000234,4.21e-25,48;CL:0000763,4.83e-19,108;CL:0000049,4.83e-19,108;CL:0002087,1.14e-17,115;CL:0000860,1.36e-17,42;CL:0002057,1.36e-17,42;CL:0002031,8.67e-17,120;CL:0000738,2.14e-14,136;CL:0000037,2.18e-12,168;CL:0002032,1.32e-11,161;CL:0000837,1.32e-11,161;CL:0000988,1.45e-11,177;CL:0000840,1.80e-11,5;CL:0001029,1.80e-11,5;CL:0000235,5.09e-11,6;CL:0002619,5.94e-10,3;CL:0000167,1.05e-08,1;CL:0000164,1.05e-08,1;CL:0000502,1.05e-08,1;CL:0000172,1.05e-08,1;CL:0000173,1.05e-08,1;CL:0002351,1.05e-08,1;CL:0001024,3.33e-08,1;CL:0000990,8.48e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-13;42!CL:0002351;1.05e-08;1!UBERON:0010115;2.02e-08;1!CL:0000049;9.09e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.05e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.93e-21!115;UBERON:0002371!2.42e-15!80;UBERON:0002390!5.81e-15!102;UBERON:0003061!5.81e-15!102;UBERON:0001474!1.11e-13!86;UBERON:0002193!9.16e-13!112;UBERON:0002020!2.15e-11!34;UBERON:0003528!2.15e-11!34;UBERON:0004765!2.41e-11!101;UBERON:0001434!2.41e-11!101;UBERON:0002405!3.00e-11!115;UBERON:0001869!1.32e-10!32;UBERON:0001049!8.17e-10!57;UBERON:0005068!8.17e-10!57;UBERON:0006241!8.17e-10!57;UBERON:0007135!8.17e-10!57;UBERON:0001893!9.00e-10!34;UBERON:0002619!2.46e-09!22;UBERON:0002791!7.14e-09!33;UBERON:0000062!1.07e-08!511;UBERON:0001950!1.44e-08!20;UBERON:0002616!2.53e-08!59;UBERON:0000200!4.41e-08!6;UBERON:0000956!6.07e-08!25;UBERON:0000203!6.07e-08!25;UBERON:0003075!1.03e-07!86;UBERON:0007284!1.03e-07!86;UBERON:0002780!1.65e-07!41;UBERON:0001890!1.65e-07!41;UBERON:0006240!1.65e-07!41;UBERON:0003081!2.29e-07!216;UBERON:0003080!3.00e-07!42;UBERON:0002346!4.16e-07!90;UBERON:0000955!5.18e-07!69;UBERON:0006238!5.18e-07!69;UBERON:0000922!7.82e-07!612;UBERON:0000923!9.46e-07!604;UBERON:0005291!9.46e-07!604;UBERON:0006598!9.46e-07!604;UBERON:0002532!9.46e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.75e-08;1!UBERON:0003703;1.75e-08;1!UBERON:0001174;1.75e-08;1!UBERON:0004914;1.75e-08;1!UBERON:0002363;2.02e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.70e-32,76;UBERON:0001474,3.25e-29,82;UBERON:0004765,2.60e-26,90;UBERON:0002405,2.38e-25,93;UBERON:0002390,7.10e-24,98;UBERON:0003061,7.10e-24,98;UBERON:0001434,2.51e-23,100;UBERON:0002193,2.47e-21,108;UBERON:0002204,1.75e-12,167;UBERON:0003081,1.34e-09,203;UBERON:0004913,1.75e-08,1;UBERON:0003703,1.75e-08,1;UBERON:0001174,1.75e-08,1;UBERON:0004914,1.75e-08,1;UBERON:0002363,2.02e-08,1;UBERON:0007645,2.02e-08,1;UBERON:0007647,2.02e-08,1;UBERON:0010115,2.02e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,1.76160263600908,1.10799081706375,0,0,2.46307021663917,0,1.03030227053675,0,2.26725566213286,0,0,2.46700732813095,0,0,0.256160706529101,0.236482229888585,0,0,0,0,1.36453075028923,0,0,1.28371610830437,0,0,1.39624560335142,0,0,2.8369261234557,0.622822248995575,0,1.0429658368404,0,0,5.52416453981347,0.949387162322653,0.211255286311942,0.637812899895131,0,1.57260083605093,1.35159203557356,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3591587779139,7.31344896656922,14.8912915781129,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60246323740849,0,3.41851673264075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,9.71121518136371,0,0,0,3.53844845919533,0,0,0,0.661983911750998,0,0,0,30.5084280628905,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.50648636764703,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.854183854313742,0.751145584238999,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,4.5835386727284,0.135075169236789,0,0.413373593002368,0.380494861163441,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0.490296643507811,28.0455091050935,0.196308467114945,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.31037357147929,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p9@SYT1 | |||
}} |
Revision as of 14:51, 11 January 2014
Short description: | p9@SYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SYT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000551304_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | F8VZY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.70e-32 | 76 |
bone element | 3.25e-29 | 82 |
skeletal element | 2.60e-26 | 90 |
immune system | 2.38e-25 | 93 |
hematopoietic system | 7.10e-24 | 98 |
blood island | 7.10e-24 | 98 |
skeletal system | 2.51e-23 | 100 |
hemolymphoid system | 2.47e-21 | 108 |
musculoskeletal system | 1.75e-12 | 167 |
lateral plate mesoderm | 1.34e-09 | 203 |
hepatopancreatic ampulla | 1.75e-08 | 1 |
extrahepatic bile duct | 1.75e-08 | 1 |
common bile duct | 1.75e-08 | 1 |
duodenal papilla | 1.75e-08 | 1 |
dura mater | 2.02e-08 | 1 |
future meninx | 2.02e-08 | 1 |
ectomeninx | 2.02e-08 | 1 |
future dura mater | 2.02e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.05e-08 | 1 |