FFCP PHASE1:Hg19::chr13:110838825..110838846,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1282 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2202 | |||
|TSSclassifier=strong | |||
|UniProt=P02462 | |||
|association_with_transcript=0bp_to_BC047305_5end | |||
|description=CAGE_peak_17_at_COL4A1_5end | |||
|id=chr13:110838825..110838846,- | |||
|ontology_enrichment_celltype=CL:0005020!2.09e-10!6;CL:0002138!2.09e-10!6;CL:0005022!2.09e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.67e-23;3!CL:0002262;1.38e-09;2!CL:1000398;1.38e-09;2!CL:0000349;1.44e-08;19!CL:0002521;8.38e-07;3!CL:0002615;8.38e-07;3!CL:0002567;8.38e-07;3!CL:0002579;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.68e-23,3;CL:0002262,1.22e-09,2;CL:1000398,1.22e-09,2;CL:0000349,1.62e-08,19;CL:0002521,6.50e-07,3;CL:0002567,6.88e-07,3;CL:0002615,7.28e-07,3;CL:0002579,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.01e-18;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!2.15e-10!10;UBERON:0001473!2.56e-10!8;UBERON:0004536!2.56e-10!8;UBERON:0006558!2.56e-10!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.67e-23;3!UBERON:0000920;1.67e-23;3!UBERON:0005631;9.80e-16;10!UBERON:0000158;9.80e-16;10!UBERON:0003688;5.67e-12;6!UBERON:0002358;5.67e-12;6!UBERON:0003684;5.67e-12;6!UBERON:0001178;5.67e-12;6!UBERON:0000478;1.81e-11;24!UBERON:0001281;1.38e-09;2!UBERON:0003497;1.38e-09;2!UBERON:0003909;1.38e-09;2!UBERON:0003835;1.38e-09;2!UBERON:0004457;2.75e-08;9!UBERON:0000042;2.75e-08;9!UBERON:0002190;8.38e-07;3!UBERON:0001280;8.38e-07;3!UBERON:0004647;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.68e-23,3;UBERON:0003124,4.28e-22,7;UBERON:0005631,2.94e-19,14;UBERON:0000158,2.94e-19,14;UBERON:0003688,4.81e-12,6;UBERON:0002358,4.81e-12,6;UBERON:0003684,4.81e-12,6;UBERON:0001178,4.81e-12,6;UBERON:0000478,2.19e-11,24;UBERON:0001281,1.22e-09,2;UBERON:0003497,1.22e-09,2;UBERON:0003909,1.22e-09,2;UBERON:0003835,1.22e-09,2;UBERON:0004923,7.37e-09,66;UBERON:0002190,6.50e-07,3;UBERON:0001280,7.70e-07,3;UBERON:0004647,7.70e-07,3;UBERON:0005171,7.70e-07,3 | |||
|phase1_expression=0.363356758541113,0.642301571672949,1.69145284915165,0,0.893922188854576,0,0,0,1.82829939739887,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0,0,0,0,0,1.2333377420858,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0.718618141816238,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0.925971025153221,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,1.06375246633948,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.710783897485092,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0,0,0.587403472388222,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,0.512556597022804,0,1.28683136914886,0,0,0.177561725313127,0,0.519254429183621,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0.316654886678627,1.13733384070897,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0.0897576444097721,0,0,2.74792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.399358000997982,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0.83088067605837,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.58620893471233,0,0,0,0,0,0.533937062838473,0,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0.509781344063451,0.281951753939561,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p17@COL4A1 | |||
}} |
Revision as of 18:39, 11 January 2014
Short description: | p17@COL4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_COL4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC047305_5end |
EntrezGene: | COL4A1 |
HGNC: | 2202 |
UniProt: | P02462 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.68e-23 | 3 |
endothelial cell of sinusoid | 1.22e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.22e-09 | 2 |
extraembryonic cell | 1.62e-08 | 19 |
subcutaneous fat cell | 6.50e-07 | 3 |
light melanocyte | 6.88e-07 | 3 |
adipocyte of omentum tissue | 7.28e-07 | 3 |
omentum preadipocyte | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.68e-23 | 3 |
chorion | 4.28e-22 | 7 |
extraembryonic membrane | 2.94e-19 | 14 |
membranous layer | 2.94e-19 | 14 |
omentum | 4.81e-12 | 6 |
peritoneum | 4.81e-12 | 6 |
abdominal cavity | 4.81e-12 | 6 |
visceral peritoneum | 4.81e-12 | 6 |
extraembryonic structure | 2.19e-11 | 24 |
hepatic sinusoid | 1.22e-09 | 2 |
abdomen blood vessel | 1.22e-09 | 2 |
sinusoid | 1.22e-09 | 2 |
abdominal segment blood vessel | 1.22e-09 | 2 |
organ component layer | 7.37e-09 | 66 |
subcutaneous adipose tissue | 6.50e-07 | 3 |
liver parenchyma | 7.70e-07 | 3 |
liver lobule | 7.70e-07 | 3 |
hepatic duct | 7.70e-07 | 3 |