FFCP PHASE1:Hg19::chr14:61958795..61958814,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-96bp_to_ENST00000555628_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_16_at_PRKCH_5end | |||
|id=chr14:61958795..61958814,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.21e-106!42;CL:0000860!1.80e-98!45;CL:0000766!8.24e-86!76;CL:0002194!6.92e-70!63;CL:0000576!6.92e-70!63;CL:0000040!6.92e-70!63;CL:0000559!6.92e-70!63;CL:0002009!1.85e-67!65;CL:0000839!5.42e-62!70;CL:0000557!5.45e-61!71;CL:0000763!8.20e-55!112;CL:0000049!8.20e-55!112;CL:0000738!3.93e-50!140;CL:0002087!1.32e-40!119;CL:0000037!1.21e-38!172;CL:0000566!1.21e-38!172;CL:0000988!1.46e-37!182;CL:0002032!2.56e-35!165;CL:0000837!2.56e-35!165;CL:0002031!1.22e-32!124;CL:0000094!1.58e-26!8;CL:0000081!1.72e-23!11;CL:0000134!1.95e-12!358;CL:0002320!5.67e-12!365;CL:0000775!1.37e-11!3;CL:0000219!2.42e-10!390;CL:0000767!5.36e-10!3;CL:0000842!6.68e-10!3;CL:0002393!1.35e-08!9;CL:0002397!1.35e-08!9;CL:0000771!1.96e-08!2;CL:0000048!2.11e-08!430;CL:0000034!2.22e-08!444;CL:0000080!2.29e-08!6;CL:0000723!3.96e-08!436;CL:0000224!1.57e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.01e-100;33!CL:0002057;3.01e-100;33!CL:0000473;1.58e-71;39!CL:0000234;1.58e-71;39!CL:0000576;1.78e-58;48!CL:0000766;2.67e-42;69!CL:0000094;1.40e-24;8!CL:0000763;2.25e-20;100!CL:0000081;1.01e-17;11!CL:0000775;1.41e-17;3!CL:0002087;9.09e-14;104!CL:0000771;1.55e-12;2!CL:0000738;8.32e-12;136!CL:0002393;3.53e-08;6!CL:0002397;3.53e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.26e-107,42;CL:0002057,2.26e-107,42;CL:0000473,3.31e-93,48;CL:0000234,3.31e-93,48;CL:0000766,2.74e-88,72;CL:0002194,2.29e-73,59;CL:0000576,2.29e-73,59;CL:0000040,2.29e-73,59;CL:0000559,2.29e-73,59;CL:0002009,8.34e-71,61;CL:0000839,4.52e-65,66;CL:0000557,5.02e-64,67;CL:0000763,5.33e-57,108;CL:0000049,5.33e-57,108;CL:0000738,5.14e-44,136;CL:0002032,3.31e-36,161;CL:0000837,3.31e-36,161;CL:0002087,5.22e-35,115;CL:0000037,1.97e-34,168;CL:0002031,2.62e-33,120;CL:0000988,2.35e-32,177;CL:0000094,1.62e-24,8;CL:0000081,1.12e-17,11;CL:0000775,1.41e-17,3;CL:0000134,7.77e-13,354;CL:0000771,1.55e-12,2;CL:0002320,1.87e-12,361;CL:0000219,4.18e-11,386;CL:0000048,1.87e-09,427;CL:0000723,3.17e-09,433;CL:0000034,6.25e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.76e-77;42!CL:0000049;6.28e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.74e-65!102;UBERON:0003061!1.74e-65!102;UBERON:0002193!1.17e-58!112;UBERON:0002371!4.39e-53!80;UBERON:0001474!1.01e-48!86;UBERON:0004765!4.53e-40!101;UBERON:0001434!4.53e-40!101;UBERON:0002405!5.68e-36!115;UBERON:0003081!5.95e-25!216;UBERON:0002204!2.07e-20!167;UBERON:0000178!4.43e-15!15;UBERON:0000179!4.43e-15!15;UBERON:0000463!4.43e-15!15;UBERON:0002384!2.43e-11!375;UBERON:0000926!9.55e-07!448;UBERON:0004120!9.55e-07!448;UBERON:0006603!9.55e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.80e-56,76;UBERON:0001474,2.33e-51,82;UBERON:0002390,2.77e-48,98;UBERON:0003061,2.77e-48,98;UBERON:0004765,2.62e-46,90;UBERON:0002405,1.23e-44,93;UBERON:0002193,2.82e-43,108;UBERON:0001434,4.05e-41,100;UBERON:0002204,2.92e-22,167;UBERON:0003081,3.77e-20,203;UBERON:0002384,6.23e-12,371;UBERON:0000926,1.04e-10,315;UBERON:0004120,1.04e-10,315;UBERON:0006603,1.04e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.464448369948228,0,0,0,0,0,0,2.21598163412751,1.40381113229099,1.30206522429511,0,0,0,0.872389432677388,0.377875943688809,1.4555043671269,3.0215774797739,3.28934310417461,4.33588919253145,4.02769349251011,2.56160706529101,8.51336027598907,2.75796544589295,3.22742341791913,6.77132432971709,3.76484679085209,3.27487380069415,3.37085226667627,5.81559395504715,3.20929027076094,7.67204550958849,1.64925650093358,0.997318288108159,1.27867425159808,4.35313857942876,2.26954089876456,3.73693349397345,3.76872997885115,3.65038042894141,4.99534342821768,1.21079900526674,1.84138817993782,3.48108626184973,0.422510572623884,0.212604299965044,0,0.786300418025466,0.600707571366025,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,54.2892369807656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24304916763028,5.9832291840805,21.9640222121099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0,0.238231775457789,1.23408681925858,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@PRKCH | |||
}} |
Revision as of 20:26, 11 January 2014
Short description: | p16@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PRKCH_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -96bp_to_ENST00000555628_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.26e-107 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.26e-107 | 42 |
defensive cell | 3.31e-93 | 48 |
phagocyte | 3.31e-93 | 48 |
myeloid leukocyte | 2.74e-88 | 72 |
monopoietic cell | 2.29e-73 | 59 |
monocyte | 2.29e-73 | 59 |
monoblast | 2.29e-73 | 59 |
promonocyte | 2.29e-73 | 59 |
macrophage dendritic cell progenitor | 8.34e-71 | 61 |
myeloid lineage restricted progenitor cell | 4.52e-65 | 66 |
granulocyte monocyte progenitor cell | 5.02e-64 | 67 |
myeloid cell | 5.33e-57 | 108 |
common myeloid progenitor | 5.33e-57 | 108 |
leukocyte | 5.14e-44 | 136 |
hematopoietic oligopotent progenitor cell | 3.31e-36 | 161 |
hematopoietic multipotent progenitor cell | 3.31e-36 | 161 |
nongranular leukocyte | 5.22e-35 | 115 |
hematopoietic stem cell | 1.97e-34 | 168 |
hematopoietic lineage restricted progenitor cell | 2.62e-33 | 120 |
hematopoietic cell | 2.35e-32 | 177 |
granulocyte | 1.62e-24 | 8 |
blood cell | 1.12e-17 | 11 |
neutrophil | 1.41e-17 | 3 |
mesenchymal cell | 7.77e-13 | 354 |
eosinophil | 1.55e-12 | 2 |
connective tissue cell | 1.87e-12 | 361 |
motile cell | 4.18e-11 | 386 |
multi fate stem cell | 1.87e-09 | 427 |
somatic stem cell | 3.17e-09 | 433 |
stem cell | 6.25e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.80e-56 | 76 |
bone element | 2.33e-51 | 82 |
hematopoietic system | 2.77e-48 | 98 |
blood island | 2.77e-48 | 98 |
skeletal element | 2.62e-46 | 90 |
immune system | 1.23e-44 | 93 |
hemolymphoid system | 2.82e-43 | 108 |
skeletal system | 4.05e-41 | 100 |
musculoskeletal system | 2.92e-22 | 167 |
lateral plate mesoderm | 3.77e-20 | 203 |
connective tissue | 6.23e-12 | 371 |
mesoderm | 1.04e-10 | 315 |
mesoderm-derived structure | 1.04e-10 | 315 |
presumptive mesoderm | 1.04e-10 | 315 |