FFCP PHASE1:Hg19::chr14:92980081..92980097,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18751 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TB24 | |||
|association_with_transcript=-20bp_to_ENST00000216487_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_13_at_RIN3_5end | |||
|id=chr14:92980081..92980097,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.61e-22!42;CL:0000860!1.12e-19!45;CL:0000766!1.35e-16!76;CL:0000557!3.88e-15!71;CL:0000839!1.47e-14!70;CL:0002009!1.23e-12!65;CL:0002194!1.46e-12!63;CL:0000576!1.46e-12!63;CL:0000040!1.46e-12!63;CL:0000559!1.46e-12!63;CL:0000738!1.93e-10!140;CL:0002031!2.98e-08!124;CL:0002320!4.02e-08!365;CL:0002393!4.78e-08!9;CL:0002397!4.78e-08!9;CL:0000134!5.42e-08!358;CL:0000219!8.65e-08!390;CL:0000763!1.57e-07!112;CL:0000049!1.57e-07!112;CL:0002087!1.75e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.68e-22;33!CL:0002057;8.68e-22;33!CL:0000766;4.32e-19;69!CL:0000576;4.32e-18;48!CL:0000473;2.74e-15;39!CL:0000234;2.74e-15;39!CL:0000097;1.03e-14;5!CL:0002393;1.36e-12;6!CL:0002397;1.36e-12;6!CL:0000346;7.77e-09;3!CL:1000428;7.77e-09;3!CL:0000226;2.62e-08;3!CL:0000842;2.62e-08;3!CL:0002570;4.11e-08;8!CL:0000163;5.77e-08;9!CL:0000738;1.06e-07;136!CL:0002087;1.35e-07;104!CL:0000763;6.41e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-37,42;CL:0002057,1.68e-37,42;CL:0000766,3.88e-35,72;CL:0000557,2.10e-33,67;CL:0000473,7.18e-32,48;CL:0000234,7.18e-32,48;CL:0000839,1.17e-31,66;CL:0002009,4.27e-25,61;CL:0002194,5.19e-24,59;CL:0000576,5.19e-24,59;CL:0000040,5.19e-24,59;CL:0000559,5.19e-24,59;CL:0000763,6.87e-22,108;CL:0000049,6.87e-22,108;CL:0000738,1.44e-21,136;CL:0002031,3.22e-17,120;CL:0000037,1.77e-15,168;CL:0002393,2.15e-15,9;CL:0002397,2.15e-15,9;CL:0000097,5.95e-15,5;CL:0002028,5.95e-15,5;CL:0000988,3.57e-14,177;CL:0002087,3.91e-14,115;CL:0002032,1.67e-13,161;CL:0000837,1.67e-13,161;CL:0002320,1.85e-13,361;CL:0000134,2.71e-13,354;CL:0000048,2.18e-12,427;CL:0000034,2.94e-12,441;CL:0000723,5.28e-12,433;CL:0000219,1.53e-11,386;CL:0000346,3.12e-09,3;CL:1000428,3.12e-09,3;CL:0000226,1.89e-08,3;CL:0000842,1.89e-08,3;CL:0000163,4.32e-08,9;CL:0002570,5.64e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.52e-13!86;UBERON:0004765!1.41e-12!101;UBERON:0001434!1.41e-12!101;UBERON:0002371!1.92e-12!80;UBERON:0002390!5.24e-10!102;UBERON:0003061!5.24e-10!102;UBERON:0002204!6.54e-09!167;UBERON:0002193!1.67e-08!112;UBERON:0002384!3.44e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;7.77e-09;3!UBERON:0001992;7.77e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.99e-28,76;UBERON:0001474,1.74e-27,82;UBERON:0004765,7.19e-26,90;UBERON:0002390,7.74e-25,98;UBERON:0003061,7.74e-25,98;UBERON:0001434,2.25e-22,100;UBERON:0002193,1.14e-21,108;UBERON:0002405,1.17e-21,93;UBERON:0002204,3.09e-15,167;UBERON:0002384,1.05e-12,371;UBERON:0000926,1.50e-09,315;UBERON:0004120,1.50e-09,315;UBERON:0006603,1.50e-09,315;UBERON:0003081,1.65e-09,203;UBERON:0000412,3.12e-09,3;UBERON:0001992,3.12e-09,3 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,0,0,0,1.26343974685366,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0,0,0.369363174230364,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0.534893840235659,0.410502947249729,0.157421562627358,3.93364276848904,0.767658796194425,2.32224184974114,0,0,0,0,0,0,18.8358438900838,12.4337557431488,6.94434786290726,0.223915474239924,0,0.257575567634187,1.16318591023652,1.13362783106643,0.485168122375632,1.39457422143411,0.822335776043652,1.85823822537062,0.28769239232215,0,0,1.37898272294647,1.29096936716765,0,1.31769637679823,0.818718450173537,1.12361742222542,2.14258724659632,3.20929027076094,3.83602275479425,0.329851300186716,0.997318288108159,0.426224750532694,2.32167390902867,1.70215567407342,4.35975574296902,1.50749199154046,1.0429658368404,0.868755378820466,0.605399502633369,2.57794345191295,2.84816148696796,2.11255286311942,2.33864729961548,0.838634582033504,1.01095768031846,0.901061357049038,0.48217676009124,3.42015292489498,1.59133341759272,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0.764546456250458,0,2.80254281490768,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.552700035571697,0.579606171470105,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,0.144824403882799,0,0,0,0.361439152384566,2.50668955317945,0.869079113764942,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0.132957960518865,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0.756787138224657,0,0.234321431833797,0.312160076830321,1.1409436430889,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0.309977343527296,0,0,0,0.718618141816238,0,0.125118519871964,0.831192346452549,0,0,0.150238058906597,0.113432183160021,0.717558542755448,0,0.847727604638247,0,0.103052529238439,0.515281080091258,0.37223371266318,0.675105328965065,0.389748020644795,0.757301322732344,0.184099797284599,0,0,0.10075209822764,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,1.56449532329816,1.92972281457866,4.14404764057442,0,0.721879481669586,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0.850650583454319,0,0,0,32.5157737011323,1.76096868026452,4.14656231081544,2.73827911492227,3.1560608356595,0.190493682876507,0.381988425558278,1.17217447210047,0,0.102827492703324,0.600686115687835,0.285826432630578,0.448524337381443,1.74384027533312,1.1734125731352,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,1.25342674267927,0,0.788123040807709,0.862510299438069,1.15508732651774,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,1.00034104211935,0,0,0.713715955188647,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.781952530212746,0.195801157462741,0,1.03384013061444,1.72571360654893,1.70764092485511,0,0,0,0.744323423456331,0,1.40330047216537,0.640695746278505,0,0.160853921143607,0,2.00472601943452,1.77561725313127,1.97105174433142,0,2.09178681227927,0.120859449591622,0,0.276242966807689,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,1.06337790121334,0.154048617114644,0,0.827019434907183,0.322260734604821,0.725083469571143,0.255679882248303,1.24644849905432,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,1.02359116524534,0,0,0.78494864019923,0,0,0.235624804691373,0.606547444719948,0,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,0.66343897524122,0,0,0,0.811641507850816,0.30982349809975,0,0,0,1.426684205925,0,0.633322905892992,0.658589785919804,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0.997896857164083,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.586032717087576,0,0,1.70481688083848,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0.20453736500431,0.246169610922139,0.311039587661807,0.179736702294654,0.358042349351218,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,1.1528195219403,0.538545866458633,0.434589487688032,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0,0,0,0.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| |||
|short_description=p13@RIN3 | |||
}} |
Revision as of 21:34, 11 January 2014
Short description: | p13@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RIN3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -20bp_to_ENST00000216487_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | Q8TB24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.99e-28 | 76 |
bone element | 1.74e-27 | 82 |
skeletal element | 7.19e-26 | 90 |
hematopoietic system | 7.74e-25 | 98 |
blood island | 7.74e-25 | 98 |
skeletal system | 2.25e-22 | 100 |
hemolymphoid system | 1.14e-21 | 108 |
immune system | 1.17e-21 | 93 |
musculoskeletal system | 3.09e-15 | 167 |
connective tissue | 1.05e-12 | 371 |
mesoderm | 1.50e-09 | 315 |
mesoderm-derived structure | 1.50e-09 | 315 |
presumptive mesoderm | 1.50e-09 | 315 |
lateral plate mesoderm | 1.65e-09 | 203 |
dermal papilla | 3.12e-09 | 3 |
papillary layer of dermis | 3.12e-09 | 3 |