FFCP PHASE1:Hg19::chr17:17184546..17184569,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2239 | |||
|TSSclassifier=strong | |||
|UniProt=C9JLV5 | |||
|association_with_transcript=0bp_to_ENST00000417352,ENST00000477299,ENST00000492672_5end | |||
|coexpression_cluster_id=C3609 | |||
|description=CAGE_peak_1_at_COPS3_5end | |||
|id=chr17:17184546..17184569,- | |||
|ontology_enrichment_celltype=CL:0000037!3.90e-07!172;CL:0000566!3.90e-07!172;CL:0000838!8.15e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.47e-07,168;CL:0000838,8.15e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.98e-15!239;DOID:162!7.77e-15!235;DOID:2531!2.03e-08!51;DOID:0060083!2.03e-08!51;DOID:0050686!9.44e-08!137;DOID:305!1.08e-07!106;DOID:1240!3.12e-07!39;DOID:0050687!6.26e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.98e-15,239;DOID:162,7.77e-15,235;DOID:2531,2.03e-08,51;DOID:0060083,2.03e-08,51;DOID:0050686,9.44e-08,137;DOID:305,1.08e-07,106;DOID:1240,3.12e-07,39;DOID:0050687,6.26e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001557!1.73e-07!19;UBERON:0001737!2.32e-07!9;UBERON:0000178!6.17e-07!15;UBERON:0000179!6.17e-07!15;UBERON:0000463!6.17e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.28e-07;9!UBERON:0001557;2.28e-07;9!UBERON:0000178;5.69e-07;15!UBERON:0000179;5.69e-07;15!UBERON:0000463;5.69e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,1.73e-07,19;UBERON:0001737,2.32e-07,9;UBERON:0000178,6.17e-07,15;UBERON:0000179,6.17e-07,15;UBERON:0000463,6.17e-07,15 | |||
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| |||
|short_description=p1@COPS3 | |||
}} |
Revision as of 14:06, 20 January 2014
Short description: | p1@COPS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COPS3_5end |
Coexpression cluster: | C3609_osteosarcoma_embryonic_Reticulocytes_testicular_chronic_Hep2_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000417352, ENST00000477299, ENST00000492672_5end |
EntrezGene: | COPS3 |
HGNC: | 2239 |
UniProt: | C9JLV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.47e-07 | 168 |
lymphoid lineage restricted progenitor cell | 8.15e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 1.73e-07 | 19 |
larynx | 2.32e-07 | 9 |
blood | 6.17e-07 | 15 |
haemolymphatic fluid | 6.17e-07 | 15 |
organism substance | 6.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.98e-15 | 239 |
cancer | 7.77e-15 | 235 |
hematologic cancer | 2.03e-08 | 51 |
immune system cancer | 2.03e-08 | 51 |
organ system cancer | 9.44e-08 | 137 |
carcinoma | 1.08e-07 | 106 |
leukemia | 3.12e-07 | 39 |
cell type cancer | 6.26e-07 | 143 |