FFCP PHASE1:Hg19::chr17:59234805..59234819,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54828 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14347 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002izb.3_5end | |||
|description=CAGE_peak_4_at_BCAS3_5end | |||
|id=chr17:59234805..59234819,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.01e-11;1!CL:0002372;1.01e-11;1!CL:0002253;9.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.19e-11,1;CL:0002372,1.19e-11,1;CL:0002253,9.44e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.34e-22;2!UBERON:0005754;4.53e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.13e-21;2!DOID:3119;2.46e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.02e-21,2;DOID:3119,2.02e-07,14;DOID:3307,9.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.57e-21!115;UBERON:0002616!2.30e-11!59;UBERON:0000073!2.52e-11!94;UBERON:0001016!2.52e-11!94;UBERON:0001049!3.73e-11!57;UBERON:0005068!3.73e-11!57;UBERON:0006241!3.73e-11!57;UBERON:0007135!3.73e-11!57;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0001017!6.91e-10!82;UBERON:0005743!6.93e-10!86;UBERON:0003075!1.86e-09!86;UBERON:0007284!1.86e-09!86;UBERON:0002619!7.26e-09!22;UBERON:0001950!8.49e-09!20;UBERON:0002346!1.26e-08!90;UBERON:0000956!1.29e-08!25;UBERON:0000203!1.29e-08!25;UBERON:0000153!1.79e-08!129;UBERON:0007811!1.79e-08!129;UBERON:0001893!4.61e-08!34;UBERON:0002020!4.68e-08!34;UBERON:0003528!4.68e-08!34;UBERON:0001869!6.24e-08!32;UBERON:0004121!7.27e-08!169;UBERON:0000033!1.06e-07!123;UBERON:0002780!1.14e-07!41;UBERON:0001890!1.14e-07!41;UBERON:0006240!1.14e-07!41;UBERON:0000924!2.15e-07!173;UBERON:0006601!2.15e-07!173;UBERON:0003080!2.29e-07!42;UBERON:0002791!2.32e-07!33;UBERON:0000200!2.57e-07!6;UBERON:0000475!4.21e-07!365;UBERON:0000481!9.39e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.65e-32;3!UBERON:0004054;1.65e-32;3!UBERON:0005904;1.45e-24;4!UBERON:0001301;2.63e-12;1!UBERON:0005795;3.45e-12;1!UBERON:0000998;4.53e-12;1!UBERON:0006868;4.53e-12;1!UBERON:0001000;1.01e-11;1!UBERON:0002171;1.01e-11;1!UBERON:0006518;1.01e-11;1!UBERON:0008949;1.01e-11;1!UBERON:0000101;1.01e-11;1!UBERON:0005352;1.01e-11;1!UBERON:0002167;1.01e-11;1!UBERON:0001052;1.36e-11;4!UBERON:0000058;3.47e-10;10!UBERON:0004907;1.87e-09;5!UBERON:0003135;2.62e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.02e-32,3;UBERON:0004054,1.02e-32,3;UBERON:0005904,1.01e-24,4;UBERON:0001301,2.63e-12,1;UBERON:0000998,4.53e-12,1;UBERON:0006868,4.53e-12,1;UBERON:0001000,6.26e-12,1;UBERON:0005352,6.26e-12,1;UBERON:0001052,1.13e-11,4;UBERON:0002171,1.47e-11,1;UBERON:0006518,1.47e-11,1;UBERON:0008949,1.47e-11,1;UBERON:0000101,1.47e-11,1;UBERON:0002167,1.47e-11,1;UBERON:0004907,1.62e-09,5;UBERON:0003135,2.31e-09,11 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.622422070799533,0,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0,0,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.506328996723799,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0.775630294546667,0,0,0,0,0.514414748524284,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0.975267478179181,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.591095237907095,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,4.54416143458391,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,1.97292201424695,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,7.86270007089136,0,0,0.0730893170861856,0,0.290967049465258,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,0.687481272035051,0,0,0.858452096273142,0,0.470284307407084,0.360299883542404,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.242998226632099,0,0.394028536495991,0.944182586429966,0,2.15144807199414,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0.511164065356265,0,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0.640724475406168,1.25763444079733,1.24271716604159,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0.573409195690071,0.221858103073705,0.372578417648301,0,0,1.66814029295813,1.42732666772484,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,2.04630994085843,0.539124056983409,0.786329709279482,0.54604819096007,0,0,0,0,0,0,0,0,0.3062454773532,0.256916900385838,0,0.319267718114302,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0.994581110581374,0.0752103283492573,0,0,0,0,0,0.337687923091973,0,0.620060389503552,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0,0.135939465953663,0.263091094251396,0,0,0.235479278551542,0,1.96190514319652,0,0.431855182437243,0,1.78691360441641,0.158013611732727,0.697448552208751,1.04314963381548,0.801711364730253,0,0,0.691259661814092,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,1.98950775161368,0.118920090777569,0,0,0,0,0.218559560503957,0,0.980593287015622,0.235676547101626,0.196308467114945,0.594092800654172,0,0,0,0.193373663920732,0,0,0,0,1.46067277649303,0,0,0.157771562193185,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.833565680400634,0.803892390468535,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0,0,0,0,0.435433495793923,1.02669990325584,0,0,0,0,0,3.8614456457388,0.359300808426348,0,0.122241444182866,3.25516942652591,0,0,0 | |||
|short_description=p4@BCAS3 | |||
}} |
Revision as of 16:39, 20 January 2014
Short description: | p4@BCAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCAS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002izb.3_5end |
EntrezGene: | BCAS3 |
HGNC: | 14347 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.19e-11 | 1 |
myotube | 1.19e-11 | 1 |
epithelial cell of large intestine | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.02e-32 | 3 |
internal male genitalia | 1.02e-32 | 3 |
duct of male reproductive system | 1.01e-24 | 4 |
epididymis | 2.63e-12 | 1 |
seminal vesicle | 4.53e-12 | 1 |
seminal fluid secreting gland | 4.53e-12 | 1 |
vas deferens | 6.26e-12 | 1 |
spermatic cord | 6.26e-12 | 1 |
rectum | 1.13e-11 | 4 |
lower lobe of right lung | 1.47e-11 | 1 |
right lung lobe | 1.47e-11 | 1 |
lower lobe of lung | 1.47e-11 | 1 |
lobe of lung | 1.47e-11 | 1 |
right lung | 1.47e-11 | 1 |
lower digestive tract | 1.62e-09 | 5 |
male reproductive organ | 2.31e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.02e-21 | 2 |
gastrointestinal system cancer | 2.02e-07 | 14 |
teratoma | 9.96e-07 | 2 |