FFCP PHASE1:Hg19::chr18:73967203..73967220,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr18:73967203..73967220,- | |||
|id=chr18:73967203..73967220,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002569;4.60e-11;6!CL:1000415;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,6.24e-11,6;CL:1000415,5.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.52e-07;10!UBERON:0005564;4.52e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.17e-16;4!DOID:1325;8.91e-10;7!DOID:3904;8.91e-10;7!DOID:3905;8.45e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.93e-16,4;DOID:1325,8.35e-10,7;DOID:3904,8.35e-10,7;DOID:3905,8.03e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.11e-14!34;UBERON:0002791!1.56e-13!33;UBERON:0002020!3.33e-13!34;UBERON:0003528!3.33e-13!34;UBERON:0007023!5.87e-13!115;UBERON:0001869!2.93e-12!32;UBERON:0001049!1.27e-11!57;UBERON:0005068!1.27e-11!57;UBERON:0006241!1.27e-11!57;UBERON:0007135!1.27e-11!57;UBERON:0002780!1.76e-11!41;UBERON:0001890!1.76e-11!41;UBERON:0006240!1.76e-11!41;UBERON:0003080!4.12e-11!42;UBERON:0002616!4.72e-11!59;UBERON:0000955!1.30e-10!69;UBERON:0006238!1.30e-10!69;UBERON:0005743!3.55e-10!86;UBERON:0003075!2.23e-09!86;UBERON:0007284!2.23e-09!86;UBERON:0003056!2.61e-09!61;UBERON:0001017!4.97e-09!82;UBERON:0000956!5.02e-09!25;UBERON:0000203!5.02e-09!25;UBERON:0000033!1.07e-08!123;UBERON:0000153!1.08e-08!129;UBERON:0007811!1.08e-08!129;UBERON:0002346!1.08e-08!90;UBERON:0002619!1.13e-08!22;UBERON:0000073!1.24e-08!94;UBERON:0001016!1.24e-08!94;UBERON:0001950!5.27e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;7.00e-17;1!UBERON:0009842;7.00e-17;1!UBERON:0003704;7.00e-17;1!UBERON:0001171;7.00e-17;1!UBERON:0001172;7.00e-17;1!UBERON:0003422;4.60e-11;6!UBERON:0002294;9.94e-10;7!UBERON:0001173;9.94e-10;7!UBERON:0003104;1.29e-09;7!UBERON:0009142;1.29e-09;7!UBERON:0000473;1.26e-08;8!UBERON:0002331;5.42e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.57e-17,1;UBERON:0009842,7.57e-17,1;UBERON:0003704,7.57e-17,1;UBERON:0001171,7.57e-17,1;UBERON:0001172,7.57e-17,1;UBERON:0003422,6.24e-11,6;UBERON:0000473,1.26e-08,8;UBERON:0002294,8.60e-08,9;UBERON:0001173,8.60e-08,9;UBERON:0004912,8.60e-08,9;UBERON:0002331,6.50e-07,10;UBERON:0000358,6.50e-07,10;UBERON:0000307,6.50e-07,10;UBERON:0000091,6.50e-07,10;UBERON:0000087,6.50e-07,10;UBERON:0007010,6.50e-07,10;UBERON:0007806,6.50e-07,10;UBERON:0008780,6.50e-07,10;UBERON:0005728,6.50e-07,10 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.919463387397059,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0.849523652246594,0.557216921387392,0,0,0.296964680832639,0,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,2.62066728448103,0.922255617552241,0,0.651884231532048,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0,0,0,0,0,0,0,0,0,0,2.87788041758177,0,0.189932387867636,0,1.44285876452761,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,1.23138781124008,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0.197611631897944,0,0,0.544017803369474,0,0,0,0.314108192500469,0,0,0,0,0,0.124192805882767,0,0.624902039810533,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0.376051641746286,1.41193548092464,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0,0.271878931907327,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,1.42704108933082,0,0,16.6059127923341,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.193373663920732,1.79894080664872,0.178553938605658,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.506794004045748,0,0,0,0,1.28823786971007,2.67964130156179,0,0,0,0,0.193766729508018,0,2.13050538903166,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:73967203..73967220,- | |||
}} |
Revision as of 19:51, 20 January 2014
Short description: | p@chr18:73967203..73967220, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:73967203..73967220, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 6.24e-11 | 6 |
epithelial cell of gall bladder | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.57e-17 | 1 |
acinus | 7.57e-17 | 1 |
intrahepatic bile duct | 7.57e-17 | 1 |
portal lobule | 7.57e-17 | 1 |
hepatic acinus | 7.57e-17 | 1 |
mesenchyme of umbilical cord | 6.24e-11 | 6 |
testis | 1.26e-08 | 8 |
biliary system | 8.60e-08 | 9 |
biliary tree | 8.60e-08 | 9 |
biliary bud | 8.60e-08 | 9 |
umbilical cord | 6.50e-07 | 10 |
blastocyst | 6.50e-07 | 10 |
blastula | 6.50e-07 | 10 |
bilaminar disc | 6.50e-07 | 10 |
inner cell mass | 6.50e-07 | 10 |
cleaving embryo | 6.50e-07 | 10 |
connecting stalk | 6.50e-07 | 10 |
inner cell mass derived epiblast | 6.50e-07 | 10 |
extraembryonic mesoderm | 6.50e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.93e-16 | 4 |
bronchus cancer | 8.35e-10 | 7 |
bronchogenic carcinoma | 8.35e-10 | 7 |
lung carcinoma | 8.03e-08 | 9 |