FFCP PHASE1:Hg19::chr19:47781063..47781077,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:47781063..47781077,+ | |||
|id=chr19:47781063..47781077,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;5.92e-26;1!CL:0002262;1.07e-13;2!CL:1000398;1.07e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,8.28e-14,2;CL:1000398,8.28e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.15e-26;1!UBERON:0004872;3.06e-15;7!UBERON:0006965;1.07e-13;2!UBERON:0005062;1.69e-07;4!UBERON:0007284;1.69e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.81e-19!115;UBERON:0001950!8.13e-16!20;UBERON:0002020!1.28e-15!34;UBERON:0003528!1.28e-15!34;UBERON:0001893!1.72e-15!34;UBERON:0001869!1.46e-14!32;UBERON:0002619!3.40e-14!22;UBERON:0002791!4.79e-14!33;UBERON:0002780!6.67e-14!41;UBERON:0001890!6.67e-14!41;UBERON:0006240!6.67e-14!41;UBERON:0003080!1.76e-13!42;UBERON:0001049!6.76e-13!57;UBERON:0005068!6.76e-13!57;UBERON:0006241!6.76e-13!57;UBERON:0007135!6.76e-13!57;UBERON:0002616!2.67e-12!59;UBERON:0000956!3.10e-12!25;UBERON:0000203!3.10e-12!25;UBERON:0000955!3.23e-12!69;UBERON:0006238!3.23e-12!69;UBERON:0000200!3.43e-11!6;UBERON:0001017!1.17e-10!82;UBERON:0003075!4.00e-10!86;UBERON:0007284!4.00e-10!86;UBERON:0005743!6.45e-10!86;UBERON:0002346!1.96e-09!90;UBERON:0002771!4.11e-09!3;UBERON:0001871!1.61e-08!7;UBERON:0000033!1.70e-08!123;UBERON:0000073!1.74e-08!94;UBERON:0001016!1.74e-08!94;UBERON:0003056!4.24e-08!61;UBERON:0000153!8.12e-08!129;UBERON:0007811!8.12e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;5.92e-26;1!UBERON:0002146;5.92e-26;1!UBERON:0007195;5.92e-26;1!UBERON:0005623;5.92e-26;1!UBERON:0001281;1.07e-13;2!UBERON:0003497;1.07e-13;2!UBERON:0003909;1.07e-13;2!UBERON:0003835;1.07e-13;2!UBERON:0003978;1.41e-09;3!UBERON:0000946;1.41e-09;3!UBERON:0001280;1.41e-09;3!UBERON:0004647;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,7.62e-26,1;UBERON:0005623,7.62e-26,1;UBERON:0007195,9.79e-26,1;UBERON:0006834,1.26e-25,1;UBERON:0001281,8.28e-14,2;UBERON:0003497,8.28e-14,2;UBERON:0003909,8.28e-14,2;UBERON:0003835,8.28e-14,2;UBERON:0001280,1.19e-09,3;UBERON:0004647,1.19e-09,3;UBERON:0005171,1.19e-09,3;UBERON:0003978,1.54e-09,3;UBERON:0009751,1.54e-09,3;UBERON:0000946,1.54e-09,3;UBERON:0002523,1.54e-09,3;UBERON:0005983,1.54e-09,3;UBERON:0002165,1.54e-09,3;UBERON:0002062,1.54e-09,3;UBERON:0007280,1.54e-09,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,1.19548792950642,0,0,1.84083628503879,0,0,0,0,0,0.197286811273867,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.14580212005842,0,0.399358000997982,0,0,2.28423806454869,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.751145584238999,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.197318320688547,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.490296643507811,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.407948941145488,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,1.1001729976458,0,0,0,0 | |||
|short_description=p@chr19:47781063..47781077,+ | |||
}} |
Revision as of 00:10, 21 January 2014
Short description: | p@chr19:47781063..47781077, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47781063..47781077, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 8.28e-14 | 2 |
endothelial cell of hepatic sinusoid | 8.28e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 7.62e-26 | 1 |
semi-lunar valve | 7.62e-26 | 1 |
stroma of bone marrow | 9.79e-26 | 1 |
uterus or analog | 1.26e-25 | 1 |
hepatic sinusoid | 8.28e-14 | 2 |
abdomen blood vessel | 8.28e-14 | 2 |
sinusoid | 8.28e-14 | 2 |
abdominal segment blood vessel | 8.28e-14 | 2 |
liver parenchyma | 1.19e-09 | 3 |
liver lobule | 1.19e-09 | 3 |
hepatic duct | 1.19e-09 | 3 |
valve | 1.54e-09 | 3 |
cardiac mesenchyme | 1.54e-09 | 3 |
cardial valve | 1.54e-09 | 3 |
tunica intima | 1.54e-09 | 3 |
heart layer | 1.54e-09 | 3 |
endocardium | 1.54e-09 | 3 |
endocardial cushion | 1.54e-09 | 3 |
presumptive endocardium | 1.54e-09 | 3 |