FFCP PHASE1:Hg19::chr20:52824813..52824848,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5203 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8868 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000493356_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_7_at_PFDN4_5end | |||
|id=chr20:52824813..52824848,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-15!115;UBERON:0001049!4.19e-14!57;UBERON:0005068!4.19e-14!57;UBERON:0006241!4.19e-14!57;UBERON:0007135!4.19e-14!57;UBERON:0001017!4.90e-12!82;UBERON:0000955!6.33e-12!69;UBERON:0006238!6.33e-12!69;UBERON:0005743!2.94e-11!86;UBERON:0000988!6.19e-11!3;UBERON:0002020!7.85e-11!34;UBERON:0003528!7.85e-11!34;UBERON:0002346!9.46e-11!90;UBERON:0006331!1.13e-10!3;UBERON:0002298!2.93e-10!8;UBERON:0003075!3.01e-10!86;UBERON:0007284!3.01e-10!86;UBERON:0002616!3.25e-10!59;UBERON:0000073!9.50e-10!94;UBERON:0001016!9.50e-10!94;UBERON:0001893!5.33e-09!34;UBERON:0002780!1.10e-08!41;UBERON:0001890!1.10e-08!41;UBERON:0006240!1.10e-08!41;UBERON:0001950!1.21e-08!20;UBERON:0003080!2.00e-08!42;UBERON:0001869!6.14e-08!32;UBERON:0002619!8.85e-08!22;UBERON:0002148!1.01e-07!2;UBERON:0009662!1.01e-07!2;UBERON:0003076!1.21e-07!15;UBERON:0003057!1.21e-07!15;UBERON:0002791!1.27e-07!33;UBERON:0000033!3.29e-07!123;UBERON:0000924!7.80e-07!173;UBERON:0006601!7.80e-07!173;UBERON:0000956!9.84e-07!25;UBERON:0000203!9.84e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35248516163906,0,0,0,0,0,0,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0.157054096250234,0,0.366078794705889,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.41023272848151,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,12.5034852060095,25.456592364837,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@PFDN4 | |||
}} |
Revision as of 12:19, 21 January 2014
Short description: | p7@PFDN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PFDN4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000493356_5end |
EntrezGene: | PFDN4 |
HGNC: | 8868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |