FFCP PHASE1:Hg19::chr21:47535916..47535938,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=1292 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2212 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BUM6 | |||
|association_with_transcript=-15bp_to_BC002484_5end | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_21_at_COL6A2_5end | |||
|id=chr21:47535916..47535938,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.81e-42!180;CL:0000057!1.53e-26!75;CL:0000048!3.90e-17!430;CL:0000723!5.24e-16!436;CL:0000034!6.32e-15!444;CL:0000183!6.63e-15!59;CL:0000680!7.27e-15!57;CL:0000056!7.27e-15!57;CL:0000355!7.27e-15!57;CL:0000187!5.75e-14!54;CL:0000393!9.82e-13!60;CL:0000211!9.82e-13!60;CL:0002620!2.13e-11!23;CL:0000192!7.91e-11!42;CL:0000514!7.91e-11!42;CL:0002320!2.25e-09!365;CL:0000359!6.15e-09!32;CL:0000134!1.38e-07!358;CL:0002371!1.45e-07!591;CL:0002570!1.88e-07!8;CL:0000219!4.64e-07!390;CL:0000499!4.77e-07!27;CL:0002334!5.27e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-15;23!CL:0002570;5.16e-11;8!CL:0000723;1.53e-10;61!CL:0000057;2.85e-10;73!CL:0000134;1.33e-09;55!CL:0002320;4.14e-09;188!CL:0000048;1.49e-08;58!CL:0000034;4.20e-08;69!CL:0000188;9.26e-08;9!CL:0000499;3.93e-07;28!CL:0000393;7.98e-07;61!CL:0000211;7.98e-07;61!CL:0000187;9.04e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.38e-27,76;CL:0000048,7.90e-22,427;CL:0000723,5.33e-21,433;CL:0000034,6.21e-20,441;CL:0002620,2.28e-15,23;CL:0002320,1.43e-14,361;CL:0000134,2.13e-12,354;CL:0000187,2.43e-11,55;CL:0000680,3.20e-11,58;CL:0000056,3.20e-11,58;CL:0000355,3.20e-11,58;CL:0002570,4.72e-11,8;CL:0000219,7.46e-10,386;CL:0000393,2.08e-09,61;CL:0000211,2.08e-09,61;CL:0000192,8.96e-08,43;CL:0000514,8.96e-08,43;CL:0000188,1.48e-07,9;CL:0000499,2.71e-07,28;CL:0000359,8.12e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.55e-21!83;UBERON:0002329!4.55e-21!83;UBERON:0003077!4.55e-21!83;UBERON:0003059!4.55e-21!83;UBERON:0007282!4.55e-21!83;UBERON:0009618!4.55e-21!83;UBERON:0007285!4.55e-21!83;UBERON:0004290!8.35e-19!70;UBERON:0005256!4.24e-16!143;UBERON:0000486!2.98e-15!82;UBERON:0001134!3.23e-15!61;UBERON:0002036!3.23e-15!61;UBERON:0003082!3.23e-15!61;UBERON:0002385!9.83e-15!63;UBERON:0001015!9.83e-15!63;UBERON:0000383!9.83e-15!63;UBERON:0001013!1.19e-10!14;UBERON:0002100!2.15e-10!216;UBERON:0003102!2.50e-09!95;UBERON:0002384!2.60e-09!375;UBERON:0002199!4.31e-09!45;UBERON:0002416!4.31e-09!45;UBERON:0003104!2.41e-07!238;UBERON:0009142!2.41e-07!238;UBERON:0004872!2.84e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.79e-13;14!UBERON:0002384;2.46e-10;198!UBERON:0002199;3.36e-10;46!UBERON:0002416;3.36e-10;46!UBERON:0003102;1.74e-08;50!UBERON:0002067;7.90e-08;9!UBERON:0002385;9.51e-08;31!UBERON:0001015;9.51e-08;31!UBERON:0000383;9.51e-08;31!UBERON:0002072;1.06e-07;5!UBERON:0002097;1.20e-07;41!UBERON:0004573;6.43e-07;33!UBERON:0004571;6.43e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.96e-16,73;UBERON:0002329,8.30e-16,71;UBERON:0003059,8.30e-16,71;UBERON:0007282,8.30e-16,71;UBERON:0004290,8.30e-16,71;UBERON:0009618,8.30e-16,71;UBERON:0003077,2.02e-15,72;UBERON:0007285,2.02e-15,72;UBERON:0002199,1.01e-14,46;UBERON:0002416,1.01e-14,46;UBERON:0002384,1.81e-14,371;UBERON:0000486,1.05e-13,83;UBERON:0007503,2.47e-13,78;UBERON:0001013,6.19e-13,14;UBERON:0005256,8.67e-12,122;UBERON:0003102,2.73e-11,99;UBERON:0001134,5.92e-11,62;UBERON:0002036,5.92e-11,62;UBERON:0003082,5.92e-11,62;UBERON:0002385,2.47e-10,64;UBERON:0001015,2.47e-10,64;UBERON:0000383,2.47e-10,64;UBERON:0003104,2.58e-10,160;UBERON:0009142,2.58e-10,160;UBERON:0002097,2.75e-10,41;UBERON:0000926,5.08e-08,315;UBERON:0004120,5.08e-08,315;UBERON:0006603,5.08e-08,315;UBERON:0002072,7.48e-08,5;UBERON:0002067,1.13e-07,9;UBERON:0004016,1.13e-07,9;UBERON:0010083,1.13e-07,9;UBERON:0004573,2.32e-07,33;UBERON:0004571,2.32e-07,33;UBERON:0001637,3.50e-07,42;UBERON:0003509,3.50e-07,42;UBERON:0004572,3.50e-07,42;UBERON:0000490,7.62e-07,148 | |||
|phase1_expression=0.908391896352783,3.21150785836475,1.40954404095971,3.00219895059391,2.68176656656373,0.872338524100369,5.06599756336621,6.31719873426831,6.26845507679612,0,0,0,0,0.990130823680373,4.30816588446291,4.70627602516243,1.20538905604795,1.46062018077475,2.43966399395253,0.123121058076788,1.83600622119828,1.88072832886853,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,3.97583067623023,1.50401373190767,3.18662341713812,2.3858578411533,0.973269740605272,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.13967460498122,1.05927344650575,3.44203944898576,3.19201543978521,1.12135520028461,0,0.98667019366864,0.622422070799533,1.34710672069688,1.47115712802113,0.454072282934794,2.30470369792,0.468642863667593,3.74592092196385,1.1409436430889,3.28787097213962,1.52664848236894,1.29498355494505,1.12360645361799,0.61246251376468,2.7023549808589,1.96318984233954,5.94001428641027,10.1379441004208,0.910161361938026,6.46756327634615,0.673344455816265,1.00094815897571,0.277064115484183,0,4.29082914118628,4.35690370829131,0.113432183160021,1.97328599257748,2.13557388818567,1.27159140695737,2.10063767259082,1.44273540933814,1.54584324027377,2.23340227597908,3.37552664482532,1.07180705677318,0.504867548488229,2.11714766877288,3.55621325001386,3.90510551768276,1.5112814734146,1.3564847384839,0,0,0,0,0,0,0.310983165046111,0,0,0,12.2215778256648,2.76269842704961,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.057870056657,4.41026134156626,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.25248486685276,0.190493682876507,0,0,0,0.514137463516618,0,0,0.112131084345361,0.43596006883328,0.36669142910475,0.646358578788889,25.0359512096318,2.535908257668,2.12750493267896,2.08014873822732,0.514414748524284,0,0.266422179016099,0.714889968290738,2.17048642156577,0.823240336780769,2.28015329005615,1.06617584622764,0,0,0,0.199945982364114,0,0,0,1.19812427745791,2.29723871668228,0,0.723906533337896,1.64381058040307,0.358121926479791,0,0,0.862510299438069,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,5.00170521059677,2.17012018959788,1.03985430765404,0.892144943985809,0.473107245101804,0.468565659970853,1.20378439891088,2.27407504055985,9.31257641632544,0.664225598535437,1.47495334833363,3.21469373531907,1.95801157462741,6.17658162859541,0,0.215714200818617,0,0,0,0.907170879989041,1.73675465473144,0.306923946576125,3.92924132206303,0.512556597022804,0.511707249066704,0.965123526861645,1.48418066444991,1.85051632563187,8.34540108971697,1.47828880824856,2.59627214591811,3.60252173225874,0.483437798366489,0,0,0.803701137152247,2.91345868810747,4.19598127870157,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,5.22021878777459,2.00263202249038,2.14905144616581,2.20538515975249,1.6113036730241,2.90033387828457,1.02271952899321,1.4245125703478,0,0,0,0,0,1.88887408098384,0,0.924100740528266,0,1.73986598415015,2.22389062924704,0.143124886741991,0.372158369359667,0,0.953150969619124,0.255897791311334,0.855877976067841,3.18203247925937,4.70969184119538,0.719489830333259,1.64722217841633,1.17812402345686,0.606547444719948,1.58510321173008,0.842516912477962,0,1.94970791705028,4.22600587027022,1.09199929126389,3.39373036688911,5.65040583101214,1.10273068709225,0,1.75380354101505,0,3.9353685122798,0.202910376962704,0.6196469961995,1.69017361519345,0.143411352204052,0.491245205065606,1.07001315444375,0.709522128141196,4.22215270595328,1.64647446479951,0.379473173765715,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,1.43246690842614,0.296964680832639,0,0,0,1.00177834520615,0,0,0.597743964753209,0.276283915531148,0,0,0,1.24415835064723,0.0898683511473268,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.341826167541004,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,1.57833761139756,0,0,0.063186579628488,0,0,0.664653872707185,0,0.627865836814451,0,0,0.138674673013139,0,0,0,1.92199335066233,0.343972064943233,0,0,0,0.193978032976839,0,1.12990370390266,0,0.19871461170299,0,0,0,1.06726497369676,0.39961921916426,0,0,0,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0,0.577901179803038,0,0,0,0,0,1.67569440763353,0.916641696046735,0,0,1.28767814440971,0,0.0671834724867263,1.80149941771202,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,2.17199840701485,0.864221491201268,1.63293680054705,0,0,0.170388021785422,0,0,0,0,0,0,0,0.427149650270779,0.471612915298998,0.828478110694391,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,2.53733164907686,8.17996584465286,3.32883516901568,2.27283606330107,2.76724691927833,3.55924488638614,2.51724075236616,5.44431325547661,1.24349760466224,1.33069634990671,0.796483835818512,4.49803112163605,1.39736661188633,1.24411862352257,1.32920857278997,4.69570555630561,0.901545653983311,1.14241563650639,0,4.9099137984691,0.751873899297419,1.85613503951397,3.18476710958893,0.800055529326307,5.49433128292469,3.36749488765919,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,3.93131818615695,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0,0,0,0,0,0.954013051960256,0,0,4.23211132428821,2.7562092961788,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,1.90691047733584,0.690359926060101,0.397832444232549,0.150420656698515,2.42046082444224,0,0,0.163771917510097,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0.0887023701626388,0,0.857440047187092,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0.17071847709395,0,0.860454717640555,0.118332000730565,0.170426809518315,2.11693525095465,0,0.31020638566432,0,0,0,0,0,0.102662806856247,3.4794432940146,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0.655678681511872,0,0,0,0,0,1.6906229103336,0.339854229375634,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,5.57992527250127,7.39481005810269,1.73050624849516,0.126166424835079,0,0,0,0,0,0.250707539292375,0.303114792872958,0.535928260312357,0,0.103432995861895,0.639701945702943,0.714193294391221,0,0,0,0,0.606351566874658,0,0.684466602170562,0.0673520530145875,0.0717222053926763,2.32862249582209,0,0.106727345877715,1.9307228228694,0,2.34640942403454,0.488965776731466,0.813792356631477,0,0.603821380773079,0 | |||
|short_description=p21@COL6A2 | |||
}} |
Revision as of 14:23, 21 January 2014
Short description: | p21@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -15bp_to_BC002484_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | Q9BUM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.38e-27 | 76 |
multi fate stem cell | 7.90e-22 | 427 |
somatic stem cell | 5.33e-21 | 433 |
stem cell | 6.21e-20 | 441 |
skin fibroblast | 2.28e-15 | 23 |
connective tissue cell | 1.43e-14 | 361 |
mesenchymal cell | 2.13e-12 | 354 |
muscle cell | 2.43e-11 | 55 |
muscle precursor cell | 3.20e-11 | 58 |
myoblast | 3.20e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.20e-11 | 58 |
mesenchymal stem cell of adipose | 4.72e-11 | 8 |
motile cell | 7.46e-10 | 386 |
electrically responsive cell | 2.08e-09 | 61 |
electrically active cell | 2.08e-09 | 61 |
smooth muscle cell | 8.96e-08 | 43 |
smooth muscle myoblast | 8.96e-08 | 43 |
cell of skeletal muscle | 1.48e-07 | 9 |
stromal cell | 2.71e-07 | 28 |
vascular associated smooth muscle cell | 8.12e-07 | 32 |