FFCP PHASE1:Hg19::chr22:35806477..35806519,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6948 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=75bp_to_ENST00000493076,uc003anw.1_5end | |||
|coexpression_cluster_id=C2621 | |||
|description=CAGE_peak_3_at_MCM5_5end | |||
|id=chr22:35806477..35806519,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.09e-58!140;CL:0000037!1.11e-46!172;CL:0000566!1.11e-46!172;CL:0002087!1.66e-45!119;CL:0000988!1.60e-42!182;CL:0002032!8.99e-42!165;CL:0000837!8.99e-42!165;CL:0002031!2.08e-38!124;CL:0000766!7.53e-34!76;CL:0002057!1.78e-33!42;CL:0000860!2.07e-30!45;CL:0002009!2.24e-28!65;CL:0002194!4.80e-28!63;CL:0000576!4.80e-28!63;CL:0000040!4.80e-28!63;CL:0000559!4.80e-28!63;CL:0000945!3.00e-27!24;CL:0000826!3.00e-27!24;CL:0000763!1.52e-25!112;CL:0000049!1.52e-25!112;CL:0000557!8.53e-25!71;CL:0000839!7.08e-24!70;CL:0000542!1.50e-14!53;CL:0000051!1.50e-14!53;CL:0000236!4.59e-14!14;CL:0000838!1.35e-13!52;CL:0000451!1.28e-12!10;CL:0000094!2.69e-12!8;CL:0002393!1.82e-11!9;CL:0002397!1.82e-11!9;CL:0000990!2.99e-10!8;CL:0000134!1.26e-09!358;CL:0002320!5.29e-09!365;CL:0000081!2.27e-08!11;CL:0000219!2.99e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.79e-49;24!CL:0000094;8.60e-27;8!CL:0000236;1.35e-20;13!CL:0000081;4.12e-19;11!CL:0000542;1.54e-15;53!CL:0000451;5.57e-15;10!CL:0000990;9.89e-14;8!CL:0000738;2.88e-11;136!CL:0000775;4.97e-11;3!CL:0000767;2.00e-10;3!CL:0002087;2.68e-09;104!CL:0002393;6.40e-09;6!CL:0002397;6.40e-09;6!CL:0000771;7.94e-09;2!CL:0000766;1.98e-08;69!CL:0000576;4.13e-08;48!CL:0000860;5.57e-08;33!CL:0002057;5.57e-08;33!CL:0000453;1.64e-07;5!CL:0000988;8.15e-07;177!CL:0000219;9.43e-07;193!CL:0000473;9.55e-07;39!CL:0000234;9.55e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.24e-55,136;CL:0000945,1.39e-49,24;CL:0000826,1.39e-49,24;CL:0002032,3.45e-43,161;CL:0000837,3.45e-43,161;CL:0000037,5.87e-43,168;CL:0000988,3.27e-40,177;CL:0002087,4.84e-36,115;CL:0002031,4.88e-32,120;CL:0000094,6.59e-27,8;CL:0000542,1.06e-24,53;CL:0000051,1.06e-24,53;CL:0000766,2.11e-24,72;CL:0000236,1.94e-23,14;CL:0000838,1.12e-22,52;CL:0000081,3.41e-19,11;CL:0000763,6.97e-19,108;CL:0000049,6.97e-19,108;CL:0000451,9.26e-15,10;CL:0000134,1.78e-14,354;CL:0000860,2.94e-14,42;CL:0002057,2.94e-14,42;CL:0002320,5.64e-14,361;CL:0000990,1.51e-13,8;CL:0002194,2.24e-13,59;CL:0000576,2.24e-13,59;CL:0000040,2.24e-13,59;CL:0000559,2.24e-13,59;CL:0002009,8.25e-13,61;CL:0000219,3.27e-12,386;CL:0000473,4.76e-12,48;CL:0000234,4.76e-12,48;CL:0000839,1.53e-11,66;CL:0000557,2.59e-11,67;CL:0000775,5.63e-11,3;CL:0000034,8.61e-11,441;CL:0000767,1.37e-10,3;CL:0000048,4.64e-10,427;CL:0000723,9.18e-10,433;CL:0000771,7.96e-09,2;CL:0002393,8.16e-09,9;CL:0002397,8.16e-09,9;CL:0000453,1.61e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;1.54e-15;53!CL:0002057;1.46e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.07e-30!102;UBERON:0003061!8.07e-30!102;UBERON:0002193!4.31e-28!112;UBERON:0002371!4.49e-23!80;UBERON:0001474!1.80e-20!86;UBERON:0002405!2.55e-19!115;UBERON:0004765!3.18e-16!101;UBERON:0001434!3.18e-16!101;UBERON:0007023!5.11e-12!115;UBERON:0002384!1.54e-08!375;UBERON:0002420!4.27e-08!9;UBERON:0007245!4.27e-08!9;UBERON:0010009!4.27e-08!9;UBERON:0010011!4.27e-08!9;UBERON:0000454!4.27e-08!9;UBERON:0002308!1.01e-07!9;UBERON:0000125!1.01e-07!9;UBERON:0003081!2.38e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.19e-11;3!UBERON:0004177;5.52e-07;5!UBERON:0005057;5.52e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.72e-13,371;UBERON:0002405,4.87e-13,93;UBERON:0002390,4.61e-12,98;UBERON:0003061,4.61e-12,98;UBERON:0002193,1.34e-11,108;UBERON:0002106,1.49e-11,3;UBERON:0004854,1.49e-11,3;UBERON:0009034,1.49e-11,3;UBERON:0002095,1.49e-11,3;UBERON:0004782,1.49e-11,3;UBERON:0003281,1.49e-11,3;UBERON:0009664,1.49e-11,3;UBERON:0002296,1.49e-11,3;UBERON:0005602,1.49e-11,3;UBERON:0001179,1.49e-11,3;UBERON:0006293,1.49e-11,3;UBERON:0002371,7.25e-11,76;UBERON:0001474,9.09e-10,82;UBERON:0004765,1.55e-08,90;UBERON:0001434,2.77e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40547463227464,9.03106483949403,8.50076438187736,1.57345710739562,1.15148819429164,1.70297735647684,0,0,0,1.47187681102573,3.2698923472107,0.293600439334847,1.10799081706375,0.200544447470142,1.73608696572681,0,0,0,0.436194716338694,0.377875943688809,1.4555043671269,1.39457422143411,0,1.23882548358041,0.575384784644301,0,0.945928919554341,1.03423704220986,2.5819387343353,2.70852973188684,0.941211697713023,0.272906150057846,1.79778787556068,0.612167784741805,0.962787081228281,0.639337125799041,0,0.199463657621632,1.27867425159808,0.870627715885752,0,2.4912889959823,0.502497330513487,0.521482918420201,1.73751075764093,0,0.736555271975129,0.632924774881769,0.845021145247767,1.06302149982522,1.25795187305026,0,0.150176892841506,0.64290234678832,0.570025487482497,0.59675003159727,1.27864907635244,3.51992488922645,1.09227722252426,3.55803701545422,0.426730222566507,2.40237592221607,2.29900975981793,0.661044872784862,2.86216126360609,2.84606484554724,2.93618594685469,2.29363936875137,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,1.0447784237956,1.06366368415092,0.715471872916026,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,27.1446184903828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,2.24702107184155,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0.540031437238115,0,0,0,0,3.53026032738866,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,4.92339221844278,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,10.2526068168933,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0.899895566206002,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,0,0.258565912723101,0.26446520348538,0,0,0.213574825135389,0,0,0.992332043623902,0.197611631897944,10.7177486575188,0,0,0,0.306345576763462,0,0,0,0,0.3755727921195,0,0.998361463831671,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,12.6659200745603,8.6362146203686,17.6650625796312,0,0,0,0.39997479170986,0,3.2720846135555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0,2.41991373867136,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,5.35708332485165,1.67590508731301,3.99764623699716,0,0,0,0,0,0.573358332605805,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0.258355639344024,0.124149428591716,0,0,0,0.217716747896961,0,1.27968900727716,0.215166616178029,0,0,0,0,0,0,0,0,0,0.603821380773079,1.9234109538194 | |||
|short_description=p3@MCM5 | |||
}} |
Revision as of 15:34, 21 January 2014
Short description: | p3@MCM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MCM5_5end |
Coexpression cluster: | C2621_migratory_Eosinophils_Neutrophils_CD14_hairy_immature_Mast |
Association with transcript: | 75bp_to_ENST00000493076, uc003anw.1_5end |
EntrezGene: | MCM5 |
HGNC: | 6948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.72e-13 | 371 |
immune system | 4.87e-13 | 93 |
hematopoietic system | 4.61e-12 | 98 |
blood island | 4.61e-12 | 98 |
hemolymphoid system | 1.34e-11 | 108 |
spleen | 1.49e-11 | 3 |
gastrointestinal system mesentery | 1.49e-11 | 3 |
stomach region | 1.49e-11 | 3 |
mesentery | 1.49e-11 | 3 |
gastrointestinal system serosa | 1.49e-11 | 3 |
mesentery of stomach | 1.49e-11 | 3 |
gut mesentery | 1.49e-11 | 3 |
dorsal mesentery | 1.49e-11 | 3 |
dorsal mesogastrium | 1.49e-11 | 3 |
peritoneal cavity | 1.49e-11 | 3 |
spleen primordium | 1.49e-11 | 3 |
bone marrow | 7.25e-11 | 76 |
bone element | 9.09e-10 | 82 |
skeletal element | 1.55e-08 | 90 |
skeletal system | 2.77e-07 | 100 |