FFCP PHASE1:Hg19::chr5:77805957..77805964,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6588 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZUX7 | |||
|association_with_transcript=-26bp_to_D86961_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_13_at_LHFPL2_5end | |||
|id=chr5:77805957..77805964,- | |||
|ontology_enrichment_celltype=CL:0002194!2.07e-51!63;CL:0000576!2.07e-51!63;CL:0000040!2.07e-51!63;CL:0000559!2.07e-51!63;CL:0002009!2.20e-49!65;CL:0000766!1.83e-46!76;CL:0002057!5.96e-45!42;CL:0000839!8.04e-45!70;CL:0000557!5.50e-44!71;CL:0000860!3.59e-41!45;CL:0000763!2.27e-29!112;CL:0000049!2.27e-29!112;CL:0002087!8.53e-24!119;CL:0000738!2.81e-21!140;CL:0002031!3.34e-21!124;CL:0002032!9.54e-17!165;CL:0000837!9.54e-17!165;CL:0000037!3.09e-16!172;CL:0000566!3.09e-16!172;CL:0000988!1.59e-14!182;CL:0000048!1.23e-13!430;CL:0000723!4.01e-13!436;CL:0000034!4.74e-13!444;CL:0000134!8.46e-13!358;CL:0002320!3.72e-12!365;CL:0000219!1.90e-11!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-128;33!CL:0002057;1.14e-128;33!CL:0000473;2.70e-121;39!CL:0000234;2.70e-121;39!CL:0000576;2.04e-65;48!CL:0000766;3.59e-42;69!CL:0000763;3.43e-23;100!CL:0000235;9.73e-21;6!CL:0002087;7.31e-16;104!CL:0000738;1.95e-12;136!CL:0000988;2.61e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.99e-130,48;CL:0000234,4.99e-130,48;CL:0000860,8.32e-110,42;CL:0002057,8.32e-110,42;CL:0002194,9.06e-109,59;CL:0000576,9.06e-109,59;CL:0000040,9.06e-109,59;CL:0000559,9.06e-109,59;CL:0002009,4.68e-105,61;CL:0000839,9.66e-97,66;CL:0000557,3.17e-95,67;CL:0000766,2.89e-88,72;CL:0000763,5.52e-57,108;CL:0000049,5.52e-57,108;CL:0002087,3.74e-53,115;CL:0002031,1.09e-50,120;CL:0000738,5.29e-44,136;CL:0002032,3.40e-36,161;CL:0000837,3.40e-36,161;CL:0000037,2.02e-34,168;CL:0000988,2.40e-32,177;CL:0000235,8.56e-21,6;CL:0000134,7.18e-14,354;CL:0002320,1.81e-13,361;CL:0000219,4.77e-12,386;CL:0000048,3.23e-11,427;CL:0000723,5.78e-11,433;CL:0000034,1.22e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.13e-82;42!CL:0000049;6.75e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.08e-37!80;UBERON:0001474!8.56e-34!86;UBERON:0004765!1.77e-32!101;UBERON:0001434!1.77e-32!101;UBERON:0002390!2.18e-30!102;UBERON:0003061!2.18e-30!102;UBERON:0002204!1.91e-26!167;UBERON:0002193!2.43e-26!112;UBERON:0002405!7.95e-23!115;UBERON:0003081!2.01e-20!216;UBERON:0002384!7.41e-12!375;UBERON:0000926!6.82e-09!448;UBERON:0004120!6.82e-09!448;UBERON:0006603!6.82e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.39e-83,76;UBERON:0001474,7.37e-77,82;UBERON:0004765,1.55e-69,90;UBERON:0002405,4.12e-67,93;UBERON:0002390,2.14e-63,98;UBERON:0003061,2.14e-63,98;UBERON:0001434,5.18e-62,100;UBERON:0002193,5.52e-57,108;UBERON:0002204,6.86e-37,167;UBERON:0003081,2.25e-27,203;UBERON:0000926,1.91e-16,315;UBERON:0004120,1.91e-16,315;UBERON:0006603,1.91e-16,315;UBERON:0002384,6.43e-13,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0,0.671746422719773,0.32389366601898,1.03030227053675,8.28769961043519,13.9814099164859,6.30718559088322,12.3187389560013,13.9797081927421,12.6979612066992,6.61692502340946,7.42866048934392,3.78371567821736,2.75796544589295,3.22742341791913,2.70852973188684,11.1062980330137,14.191119803008,12.3597916444797,7.03992952453076,5.1348644332175,5.11469700639233,3.95821560224059,6.38283704389222,4.68847225585964,7.83564944297177,5.10646702222026,6.22822248995575,5.02497330513487,6.77927793946262,5.86409880703815,7.26479403160043,6.2607198117886,6.0127853613768,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,1.17002132569619,0.594524649154913,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.099972991182057,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0.868687840005475,0,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0.328508624055237,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.95497793895076,0,0.921482106297696,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.591420599958536,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@LHFPL2 | |||
}} |
Revision as of 06:06, 22 January 2014
Short description: | p13@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LHFPL2_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -26bp_to_D86961_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | Q6ZUX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.99e-130 | 48 |
phagocyte | 4.99e-130 | 48 |
classical monocyte | 8.32e-110 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.32e-110 | 42 |
monopoietic cell | 9.06e-109 | 59 |
monocyte | 9.06e-109 | 59 |
monoblast | 9.06e-109 | 59 |
promonocyte | 9.06e-109 | 59 |
macrophage dendritic cell progenitor | 4.68e-105 | 61 |
myeloid lineage restricted progenitor cell | 9.66e-97 | 66 |
granulocyte monocyte progenitor cell | 3.17e-95 | 67 |
myeloid leukocyte | 2.89e-88 | 72 |
myeloid cell | 5.52e-57 | 108 |
common myeloid progenitor | 5.52e-57 | 108 |
nongranular leukocyte | 3.74e-53 | 115 |
hematopoietic lineage restricted progenitor cell | 1.09e-50 | 120 |
leukocyte | 5.29e-44 | 136 |
hematopoietic oligopotent progenitor cell | 3.40e-36 | 161 |
hematopoietic multipotent progenitor cell | 3.40e-36 | 161 |
hematopoietic stem cell | 2.02e-34 | 168 |
hematopoietic cell | 2.40e-32 | 177 |
macrophage | 8.56e-21 | 6 |
mesenchymal cell | 7.18e-14 | 354 |
connective tissue cell | 1.81e-13 | 361 |
motile cell | 4.77e-12 | 386 |
multi fate stem cell | 3.23e-11 | 427 |
somatic stem cell | 5.78e-11 | 433 |
stem cell | 1.22e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.39e-83 | 76 |
bone element | 7.37e-77 | 82 |
skeletal element | 1.55e-69 | 90 |
immune system | 4.12e-67 | 93 |
hematopoietic system | 2.14e-63 | 98 |
blood island | 2.14e-63 | 98 |
skeletal system | 5.18e-62 | 100 |
hemolymphoid system | 5.52e-57 | 108 |
musculoskeletal system | 6.86e-37 | 167 |
lateral plate mesoderm | 2.25e-27 | 203 |
mesoderm | 1.91e-16 | 315 |
mesoderm-derived structure | 1.91e-16 | 315 |
presumptive mesoderm | 1.91e-16 | 315 |
connective tissue | 6.43e-13 | 371 |