FFCP PHASE1:Hg19::chr5:149340282..149340336,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10994 | |||
|TSSclassifier=strong | |||
|UniProt=P50443 | |||
|association_with_transcript=0bp_to_ENST00000286298,NM_000112,uc003lrh.2_5end | |||
|description=CAGE_peak_1_at_SLC26A2_5end | |||
|id=chr5:149340282..149340336,+ | |||
|ontology_enrichment_celltype=CL:0000557!3.36e-14!71;CL:0000839!9.63e-13!70;CL:0002194!1.77e-12!63;CL:0000576!1.77e-12!63;CL:0000040!1.77e-12!63;CL:0000559!1.77e-12!63;CL:0002009!3.75e-12!65;CL:0002057!8.49e-10!42;CL:0000219!1.73e-09!390;CL:0000763!4.75e-09!112;CL:0000049!4.75e-09!112;CL:0000766!5.44e-09!76;CL:0000860!9.68e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-14;33!CL:0002057;1.08e-14;33!CL:0000473;2.91e-13;39!CL:0000234;2.91e-13;39!CL:0000576;2.88e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.19e-16,67;CL:0000839,1.62e-14,66;CL:0002194,2.30e-14,59;CL:0000576,2.30e-14,59;CL:0000040,2.30e-14,59;CL:0000559,2.30e-14,59;CL:0002009,5.84e-14,61;CL:0000473,3.92e-11,48;CL:0000234,3.92e-11,48;CL:0000766,2.77e-10,72;CL:0000219,3.74e-10,386;CL:0000763,4.72e-10,108;CL:0000049,4.72e-10,108;CL:0000860,8.49e-10,42;CL:0002057,8.49e-10,42 | |||
|ontology_enrichment_development_v019=CL:0002057;6.10e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.42e-12!86;UBERON:0002371!1.97e-11!80;UBERON:0004765!1.47e-10!101;UBERON:0001434!1.47e-10!101;UBERON:0002193!7.58e-09!112;UBERON:0002390!1.17e-08!102;UBERON:0003061!1.17e-08!102;UBERON:0002204!1.60e-07!167;UBERON:0002405!5.23e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.13e-13,82;UBERON:0002371,6.40e-13,76;UBERON:0002405,1.23e-12,93;UBERON:0004765,4.05e-12,90;UBERON:0001434,6.08e-12,100;UBERON:0000926,2.46e-10,315;UBERON:0004120,2.46e-10,315;UBERON:0006603,2.46e-10,315;UBERON:0002193,7.85e-10,108;UBERON:0002390,1.10e-09,98;UBERON:0003061,1.10e-09,98;UBERON:0002204,1.47e-08,167;UBERON:0003081,1.26e-07,203;UBERON:0002384,3.13e-07,371 | |||
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| |||
|short_description=p1@SLC26A2 | |||
}} |
Revision as of 08:15, 22 January 2014
Short description: | p1@SLC26A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC26A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000286298, NM_000112, uc003lrh.2_5end |
EntrezGene: | SLC26A2 |
HGNC: | 10994 |
UniProt: | P50443 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.19e-16 | 67 |
myeloid lineage restricted progenitor cell | 1.62e-14 | 66 |
monopoietic cell | 2.30e-14 | 59 |
monocyte | 2.30e-14 | 59 |
monoblast | 2.30e-14 | 59 |
promonocyte | 2.30e-14 | 59 |
macrophage dendritic cell progenitor | 5.84e-14 | 61 |
defensive cell | 3.92e-11 | 48 |
phagocyte | 3.92e-11 | 48 |
myeloid leukocyte | 2.77e-10 | 72 |
motile cell | 3.74e-10 | 386 |
myeloid cell | 4.72e-10 | 108 |
common myeloid progenitor | 4.72e-10 | 108 |
classical monocyte | 8.49e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.49e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.13e-13 | 82 |
bone marrow | 6.40e-13 | 76 |
immune system | 1.23e-12 | 93 |
skeletal element | 4.05e-12 | 90 |
skeletal system | 6.08e-12 | 100 |
mesoderm | 2.46e-10 | 315 |
mesoderm-derived structure | 2.46e-10 | 315 |
presumptive mesoderm | 2.46e-10 | 315 |
hemolymphoid system | 7.85e-10 | 108 |
hematopoietic system | 1.10e-09 | 98 |
blood island | 1.10e-09 | 98 |
musculoskeletal system | 1.47e-08 | 167 |
lateral plate mesoderm | 1.26e-07 | 203 |
connective tissue | 3.13e-07 | 371 |