FFCP PHASE1:Hg19::chr6:405020..405033,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2859 | |||
|description=CAGE_peak_at_chr6:405020..405033,+ | |||
|id=chr6:405020..405033,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.15e-31!140;CL:0000542!3.23e-27!53;CL:0000051!3.23e-27!53;CL:0000988!8.44e-26!182;CL:0000838!3.56e-25!52;CL:0002087!1.75e-24!119;CL:0000945!3.30e-24!24;CL:0000826!3.30e-24!24;CL:0000451!3.33e-23!10;CL:0000037!3.53e-23!172;CL:0000566!3.53e-23!172;CL:0002032!2.05e-20!165;CL:0000837!2.05e-20!165;CL:0002031!4.62e-20!124;CL:0000990!1.44e-17!8;CL:0000784!6.71e-11!3;CL:0000817!1.86e-10!3;CL:0000080!2.24e-09!6;CL:0000840!5.98e-09!5;CL:0001029!5.98e-09!5;CL:0000236!5.34e-08!14;CL:0000785!6.79e-08!2;CL:0000955!6.79e-08!2;CL:0000818!6.79e-08!2;CL:0000954!6.79e-08!2;CL:0000816!6.79e-08!2;CL:0000453!7.06e-07!5;CL:0000219!7.68e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.61e-14;1!CL:0000786;1.61e-14;1!CL:0000990;6.44e-14;8!CL:0000453;1.66e-11;5!CL:0000451;1.70e-11;10!CL:0000945;3.86e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.11e-14,1;CL:0000786,2.11e-14,1;CL:0000980,2.11e-14,1;CL:0000990,6.45e-14,8;CL:0000542,1.12e-11,53;CL:0000051,1.12e-11,53;CL:0000453,1.58e-11,5;CL:0000451,1.70e-11,10;CL:0000988,4.12e-11,177;CL:0000945,4.03e-09,24;CL:0000826,4.03e-09,24;CL:0000838,6.95e-09,52;CL:0000738,1.60e-08,136;CL:0000785,7.52e-08,2;CL:0000955,7.52e-08,2;CL:0000818,7.52e-08,2;CL:0000954,7.52e-08,2;CL:0000816,7.52e-08,2;CL:0002032,5.11e-07,161;CL:0000837,5.11e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000954;6.57e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.29e-15!10 | |||
|ontology_enrichment_disease_v019=DOID:4960;4.72e-15;1!DOID:0070004;4.72e-15;1!DOID:630;1.61e-14;1!DOID:0050177;1.61e-14;1!DOID:12603;1.61e-14;1!DOID:0050427;1.61e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.73e-15,1;DOID:0070004,4.73e-15,1;DOID:630,1.07e-14,1;DOID:0050177,1.07e-14,1;DOID:0050427,1.07e-14,1;DOID:12603,2.75e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.62e-07!15;UBERON:0000179!1.62e-07!15;UBERON:0000463!1.62e-07!15;UBERON:0002390!7.74e-07!102;UBERON:0003061!7.74e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.82e-12;10!UBERON:0000178;1.69e-08;15!UBERON:0000179;1.69e-08;15!UBERON:0000463;1.69e-08;15!UBERON:0002390;8.78e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.22e-12,10;UBERON:0000358,1.22e-12,10;UBERON:0000307,1.22e-12,10;UBERON:0000091,1.22e-12,10;UBERON:0000087,1.22e-12,10;UBERON:0007010,1.22e-12,10;UBERON:0007806,1.22e-12,10;UBERON:0008780,1.22e-12,10;UBERON:0005728,1.22e-12,10;UBERON:0000178,1.30e-08,15;UBERON:0000179,1.30e-08,15;UBERON:0000463,1.30e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.903106483949403,0.708397031823113,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0.260118695119756,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.531831842075461,2.14641561874808,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,1.17217447210047,0,0.308482478109971,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,1.11481905075431,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67464122265948,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,1.85345908419754,1.67075119208729,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17372795087739,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16916185303633,1.32864840313363,0.654261577023377,0,0,0,0.79994958341972,0,5.85530930846773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.699588091474503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.60284246151616 | |||
|short_description=p@chr6:405020..405033,+ | |||
}} |
Revision as of 09:35, 22 January 2014
Short description: | p@chr6:405020..405033, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:405020..405033, + |
Coexpression cluster: | C2859_Dendritic_migratory_myeloma_adult_lymphangiectasia_xeroderma_cord |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.11e-14 | 1 |
plasma cell | 2.11e-14 | 1 |
plasmablast | 2.11e-14 | 1 |
conventional dendritic cell | 6.45e-14 | 8 |
lymphocyte | 1.12e-11 | 53 |
common lymphoid progenitor | 1.12e-11 | 53 |
Langerhans cell | 1.58e-11 | 5 |
dendritic cell | 1.70e-11 | 10 |
hematopoietic cell | 4.12e-11 | 177 |
lymphocyte of B lineage | 4.03e-09 | 24 |
pro-B cell | 4.03e-09 | 24 |
lymphoid lineage restricted progenitor cell | 6.95e-09 | 52 |
leukocyte | 1.60e-08 | 136 |
mature B cell | 7.52e-08 | 2 |
pre-B-II cell | 7.52e-08 | 2 |
transitional stage B cell | 7.52e-08 | 2 |
small pre-B-II cell | 7.52e-08 | 2 |
immature B cell | 7.52e-08 | 2 |
hematopoietic oligopotent progenitor cell | 5.11e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.11e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.22e-12 | 10 |
blastocyst | 1.22e-12 | 10 |
blastula | 1.22e-12 | 10 |
bilaminar disc | 1.22e-12 | 10 |
inner cell mass | 1.22e-12 | 10 |
cleaving embryo | 1.22e-12 | 10 |
connecting stalk | 1.22e-12 | 10 |
inner cell mass derived epiblast | 1.22e-12 | 10 |
extraembryonic mesoderm | 1.22e-12 | 10 |
blood | 1.30e-08 | 15 |
haemolymphatic fluid | 1.30e-08 | 15 |
organism substance | 1.30e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.73e-15 | 1 |
myeloma | 4.73e-15 | 1 |
genetic disease | 1.07e-14 | 1 |
monogenic disease | 1.07e-14 | 1 |
xeroderma pigmentosum | 1.07e-14 | 1 |
acute leukemia | 2.75e-14 | 1 |