FFCP PHASE1:Hg19::chr7:871641..871677,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23353 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18587 | |||
|TSSclassifier=weak | |||
|UniProt=C9JS54 | |||
|association_with_transcript=82bp_to_ENST00000421580_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_3_at_SUN1_5end | |||
|id=chr7:871641..871677,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002537;5.16e-12;5!CL:0002541;2.92e-09;3!CL:0000349;4.34e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.99e-12,5;CL:0002541,3.98e-09,3;CL:0000349,4.38e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.65e-07;1!UBERON:0010227;2.65e-07;1!UBERON:0005425;2.65e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!1.39e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4960;2.65e-07;1!DOID:0070004;2.65e-07;1!DOID:6193;2.65e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.83e-07,1;DOID:0070004,1.83e-07,1;DOID:6193,1.95e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.83e-12!115;UBERON:0004923!9.57e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.38e-15;10!UBERON:0000158;1.38e-15;10!UBERON:0003124;2.92e-09;3!UBERON:0000920;2.92e-09;3!UBERON:0001723;6.46e-09;3!UBERON:0001033;6.46e-09;3!UBERON:0000305;1.03e-08;7!UBERON:0006834;7.74e-08;1!UBERON:0005795;1.07e-07;1!UBERON:0002079;2.65e-07;1!UBERON:0002146;2.65e-07;1!UBERON:0000941;2.65e-07;1!UBERON:0001785;2.65e-07;1!UBERON:0002464;2.65e-07;1!UBERON:0004904;2.65e-07;1!UBERON:0001021;2.65e-07;1!UBERON:0005623;2.65e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.59e-11,14;UBERON:0000158,4.59e-11,14;UBERON:0000920,3.98e-09,3;UBERON:0001723,6.74e-09,3;UBERON:0001033,6.74e-09,3;UBERON:0010056,6.74e-09,3;UBERON:0000305,8.62e-09,7;UBERON:0006834,8.00e-08,1;UBERON:0004871,9.61e-08,8;UBERON:0002079,2.35e-07,1;UBERON:0000941,2.50e-07,1;UBERON:0001785,2.50e-07,1;UBERON:0002464,2.50e-07,1;UBERON:0004904,2.50e-07,1;UBERON:0001021,2.50e-07,1;UBERON:0003902,2.50e-07,1;UBERON:0005425,2.50e-07,1;UBERON:0002146,3.20e-07,1;UBERON:0005623,3.20e-07,1 | |||
|phase1_expression=0.726713517082227,0,0.845726424575827,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,1.14950487990897,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0.786839080455332,0,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0.779873198196215,0,0.443067789167242,0.270803863765016,0.384273959177026,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0.144824403882799,0,0,0,0.722878304769133,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0,0,0.916853528483988,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0.358779271377724,0,0.423863802319124,0.900273288253207,0,0.257640540045629,0,0.843881661206331,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0,0,0.626909658919938,0.290633938513962,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.496215615637554,0.767309866440312,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,2.27466768141793,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0.510450849978337,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.02555725490326,0,0,0.284136146806413,7.40107902686839,1.78178808499583,11.3649459776716,0,0.422008249231538,0.222617410045812,0,0,2.78947183551498,0.828851746593443,0,0,0.615424027305347,0,0.0898683511473268,0.358042349351218,0,0.394573622547734,0,0,0,0,0,0,0.0874599999961957,1.44999915086959,0.455173793141999,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0.87754158861589,0,0.139423744278603,2.84715956464049,0,0,0,0,4.46601623624687,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,1.99052386215701,0.796118080530053,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0.391329237864179,0,0.394584402849391,1.20990716048664,0,0.252746318513952,2.55549813004637,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.391969589657511,0.957651272384428,0.52418000472609,1.71986032471617,0,0,0,1.06687918137261,0.176512253383001,0.225980740780532,0.274083849293502,0,0.316553979779393,0.391102765469606,0,0.426905989478705,0,0.288180834308212,0,0.171594997861965,0,0.621262677827163,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0.558564802544508,1.14580212005842,0.717873024576814,0.798716001995964,0.429226048136571,0.223171457441873,0.53746777989381,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0.546746009922222,0.670869375198532,0.157611414598396,0.944182586429966,1.79520572082991,0,0.383830394638891,1.42939065274673,0.662091970365432,0.5085370753095,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0.704815022316672,0.213574825135389,0,0.414239055347196,0,1.97611631897944,0,2.55336503108073,1.08803560673895,1.0027595760908,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,1.72214979660816,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0.705351887381368,0.6124909547064,0.385375350578757,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0.161475645631851,1.42769420259154,0.687034029507179,0.235939446695481,1.10057159113007,0.808679663052368,0,0,0,0.451261970095544,0,0,0,0.163771917510097,0.147856086217045,0.202612753855184,0,0,0.19024743058172,0,0,0.496211178389294,0,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0.177404740325278,0.115233987555779,0,0.135939465953663,0.0657727735628491,0,0.556157009460346,0.549451649953598,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.9164274741762,0,0,0,0.098150233615243,0,0.647428837187895,0.821302454849976,0,0.485710993059139,0,0.397901550322736,0,0.11294608203896,0,0.301925687133347,0.154348316215889,0,2.35158648180761,0.245148321753905,0.235676547101626,0.196308467114945,0.891139200981258,0,0,0.0939839179798536,0.128915775947154,0.299823467774787,0.178553938605658,0.352894871715692,2.16651690060754,0,0,0,0.157771562193185,0.271965960763659,0,0.5290268405154,0,0.462175628631418,0.432626562123789,0,0,0,0.815910637935854,0,0.918948995348449,0,0.454672189309436,0.535928260312357,0,0,0.213233981900981,0,0,0.124149428591716,0.897054900644907,0.0636471582781649,0.202117188958219,1.08858373948481,1.71116650542641,0.0673520530145875,0.143444410785353,0.99798106963804,0.162806537221949,0.213454691755431,0,0,0,4.03396765803459,2.44137706989443,0.665756774185513,0.201273793591026,0.320568492303233 | |||
|short_description=p3@SUN1 | |||
}} |
Revision as of 15:21, 22 January 2014
Short description: | p3@SUN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SUN1_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 82bp_to_ENST00000421580_5end |
EntrezGene: | SUN1 |
HGNC: | 18587 |
UniProt: | C9JS54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.99e-12 | 5 |
chorionic membrane mesenchymal stem cell | 3.98e-09 | 3 |
extraembryonic cell | 4.38e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.59e-11 | 14 |
membranous layer | 4.59e-11 | 14 |
egg chorion | 3.98e-09 | 3 |
tongue | 6.74e-09 | 3 |
gustatory system | 6.74e-09 | 3 |
future tongue | 6.74e-09 | 3 |
amnion | 8.62e-09 | 7 |
uterus or analog | 8.00e-08 | 1 |
somatic layer of lateral plate mesoderm | 9.61e-08 | 8 |
left cardiac atrium | 2.35e-07 | 1 |
cranial nerve II | 2.50e-07 | 1 |
cranial nerve | 2.50e-07 | 1 |
nerve trunk | 2.50e-07 | 1 |
nerve connecting eye with brain | 2.50e-07 | 1 |
nerve | 2.50e-07 | 1 |
retinal neural layer | 2.50e-07 | 1 |
presumptive neural retina | 2.50e-07 | 1 |
pulmonary valve | 3.20e-07 | 1 |
semi-lunar valve | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.83e-07 | 1 |
myeloma | 1.83e-07 | 1 |
epithelioid sarcoma | 1.95e-07 | 1 |