FFCP PHASE1:Hg19::chr7:27239740..27239759,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5102 | |||
|TSSclassifier=strong | |||
|UniProt=P31271,Q6DI00 | |||
|association_with_transcript=-15bp_to_ENST00000222753,NM_000522,uc003szb.1_5end | |||
|coexpression_cluster_id=C4682 | |||
|description=CAGE_peak_2_at_HOXA13_5end | |||
|id=chr7:27239740..27239759,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002622;1.51e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.51e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.74e-09;10!UBERON:0008947;7.64e-07;29 | |||
|ontology_enrichment_disease=DOID:14566!7.03e-21!239;DOID:305!1.18e-18!106;DOID:162!4.03e-18!235;DOID:0050687!2.27e-17!143 | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.59e-09;3!DOID:127;6.59e-09;3!DOID:0060072;9.17e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.52e-09,3;DOID:127,6.52e-09,3;DOID:305,5.23e-07,106;DOID:0060072,9.09e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001046!1.56e-17!19;UBERON:0000162!1.17e-16!14;UBERON:0001353!1.17e-16!14;UBERON:0000163!1.17e-16!14;UBERON:0006866!1.17e-16!14;UBERON:0000164!1.17e-16!14;UBERON:0000931!1.17e-16!14;UBERON:0004122!3.06e-15!15;UBERON:0003937!9.08e-15!12;UBERON:0005399!9.08e-15!12;UBERON:0002367!1.56e-13!11;UBERON:0010147!1.56e-13!11;UBERON:0009846!1.56e-13!11;UBERON:0003353!1.56e-13!11;UBERON:0004902!1.56e-13!11;UBERON:0003820!1.56e-13!11;UBERON:0009847!1.56e-13!11;UBERON:0003101!7.24e-12!22;UBERON:0000079!7.24e-12!22;UBERON:0001737!1.30e-11!9;UBERON:0005156!1.35e-11!59;UBERON:0000990!1.35e-11!59;UBERON:0001008!2.31e-10!45;UBERON:0006554!1.43e-09!44;UBERON:0004921!6.20e-09!129;UBERON:0004185!6.20e-09!129;UBERON:0004175!1.16e-07!25;UBERON:0004119!1.26e-07!169;UBERON:0000925!1.26e-07!169;UBERON:0006595!1.26e-07!169;UBERON:0003064!3.13e-07!37;UBERON:0000059!4.28e-07!11;UBERON:0001007!7.94e-07!155;UBERON:0001555!7.94e-07!155;UBERON:0007026!7.94e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.38e-21;9!UBERON:0001557;1.38e-21;9!UBERON:0003937;8.53e-18;12!UBERON:0005399;8.53e-18;12!UBERON:0002367;1.78e-15;11!UBERON:0010147;1.78e-15;11!UBERON:0004175;2.17e-13;21!UBERON:0003101;2.35e-13;22!UBERON:0000079;2.35e-13;22!UBERON:0003975;1.26e-10;18!UBERON:0000077;1.66e-10;27!UBERON:0005156;1.84e-10;59!UBERON:0000990;1.84e-10;59!UBERON:0000995;5.95e-09;17!UBERON:0000059;1.04e-08;11!UBERON:0001052;8.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001046,2.01e-22,19;UBERON:0001737,9.58e-22,9;UBERON:0000162,1.22e-18,14;UBERON:0001353,1.22e-18,14;UBERON:0000163,1.22e-18,14;UBERON:0006866,1.22e-18,14;UBERON:0000164,1.22e-18,14;UBERON:0000931,1.22e-18,14;UBERON:0003937,9.19e-18,12;UBERON:0005399,9.19e-18,12;UBERON:0004122,3.05e-17,15;UBERON:0002367,1.86e-15,11;UBERON:0010147,1.86e-15,11;UBERON:0009846,1.86e-15,11;UBERON:0003353,1.86e-15,11;UBERON:0004902,1.86e-15,11;UBERON:0003820,1.86e-15,11;UBERON:0009847,1.86e-15,11;UBERON:0005156,3.18e-15,59;UBERON:0000990,3.18e-15,59;UBERON:0003101,2.61e-13,22;UBERON:0000079,2.61e-13,22;UBERON:0004175,4.49e-13,25;UBERON:0001008,1.65e-12,48;UBERON:0003064,4.33e-12,28;UBERON:0006554,3.10e-11,47;UBERON:0005795,1.35e-10,22;UBERON:0003975,1.84e-10,22;UBERON:0004921,2.09e-10,118;UBERON:0000077,1.27e-09,29;UBERON:0001557,2.18e-09,19;UBERON:0000995,6.69e-09,21;UBERON:0000059,8.95e-09,11;UBERON:0004119,9.19e-09,160;UBERON:0000925,9.19e-09,160;UBERON:0006595,9.19e-09,160;UBERON:0001007,6.19e-08,145;UBERON:0001555,6.19e-08,145;UBERON:0007026,6.19e-08,145;UBERON:0001052,7.91e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.01392563272577,0,0.973269740605272,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.635795703478686,0,0,1.8034837803194,0.930584281657949,0,0,0,0.276149695926898,0,0,0.10075209822764,3.89989362314122,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,4.02243120135469,2.86593973132773,2.41011029883482,2.97793726377464,2.39667388501647,1.18635309555548,1.61797569792197,1.56977172100277,1.92373578473195,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.797814349754612,0,0,0,0,0,3.25572963234866,1.64648067356154,0,0,2.37585561880029,0,1.74306691720059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,1.60405176242628,0.828728900423067,5.1666501674073,4.37018803216121,8.39196255740314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,1.28197250745681,0.41254749960294,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,4.64099698787152,4.10075752665767,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,1.72093622644862,2.84922218938051,0,2.12856638442359,0,0,0,0,0,0,0,0.941438007767792,2.58303223602738,0,2.66058092122005,0.689170200620878,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0.649243880549111,0,2.51058146936511,0.156679895773023,5.01268954180134,0.846458889008016,0.642352300414798,0.605399121573143,0,0,8.29550063632837,6.03925491309523,5.67287081820489,1.75849285861836,0,0,0.811367035427949,0,0,3.36852972734796,0,0,0,1.70481688083848,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.20453736500431,0,0,0,0.179021174675609,0,10.5548444031519,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0.344743373241465,0,1.04174996959975,0,0,0,0,0,0,0.10893846351899,5.57694977114413,27.0864909933366,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,2.59666367690509,4.97630965539252,4.24596309616028,6.72133159426988,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,2.36750641709634,0,0,0.063186579628488,1.9542044523884,5.80653871824584,0,0.330991955875499,0,0,1.13843818411917,0,0,0.0979923974143777,0.34823682632161,0,0.343972064943233,0.580537987734511,0.950161122120412,1.14961639874493,0,0,0,0.548167698587004,0,0,1.17330829640882,0,0,0,1.58499458869517,0.343609788497747,0.514784993585894,0,0.124252535565433,0.235694034616795,0.815425236441684,0.941425616810999,1.4279750469085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,2.06697711180972,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.537862017998534,0,0,0,0,3.25799761052228,2.5926644736038,4.24563568142232,0,0,0,0.79318464064088,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.643324774124777,0,0,0,0,0.358177682162975,0,0,0,0.38582807654183,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0,0,1.1860729253635,0,0,0.169732529954025,0,0,0,0,0.867479195013787,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.825788063434183,0,0.115525666150338,0.381382095467167,0,1.39241355481392,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,0,7.93937885422871,0,0.255524855279191,0,0,0,0,5.85435643073416,0,0,0,0,0.118193840883968,4.11556187000656,18.0534113556182,0,2.5224494698241,6.39211104356647,0,1.43325506366115,0,0,0,0.347716544605159,0,0,0,0,0,0.118332000730565,0.0852134047591577,4.23387050190929,0,0,0,0.111855431797792,0,0.243835849964539,0,0.102662806856247,0,0,0,47.7481860387284,0,0,0.879524133963433,0,0,0,5.17349025997675,16.6700858792656,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69740502905135,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,4.7607357116491,2.34640942403454,1.71138021856013,18.717224202524,3.99454064511308,0,0 | |||
|short_description=p2@HOXA13 | |||
}} |
Revision as of 16:14, 22 January 2014
Short description: | p2@HOXA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXA13_5end |
Coexpression cluster: | C4682_small_cervix_uterus_prostate_Smooth_Prostate_smooth |
Association with transcript: | -15bp_to_ENST00000222753, NM_000522, uc003szb.1_5end |
EntrezGene: | HOXA13 |
HGNC: | 5102 |
UniProt: | P31271Q6DI00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.51e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.52e-09 | 3 |
leiomyoma | 6.52e-09 | 3 |
carcinoma | 5.23e-07 | 106 |
benign neoplasm | 9.09e-07 | 4 |