FFCP PHASE1:Hg19::chr9:119160673..119160717,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C776 | |||
|description=CAGE_peak_at_chr9:119160673..119160717,+ | |||
|id=chr9:119160673..119160717,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-22!180;CL:0000057!1.69e-18!75;CL:0000359!1.12e-13!32;CL:0000187!2.14e-13!54;CL:0000192!3.43e-13!42;CL:0000514!3.43e-13!42;CL:0000680!3.88e-12!57;CL:0000056!3.88e-12!57;CL:0000355!3.88e-12!57;CL:0000183!2.23e-11!59;CL:0000393!5.09e-11!60;CL:0000211!5.09e-11!60;CL:0002334!6.77e-10!12;CL:0000048!3.40e-07!430;CL:0002620!7.00e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.63e-13;4!CL:0002547;1.63e-13;4!CL:0002334;1.56e-12;12!CL:0002541;2.12e-11;3!CL:0002579;2.74e-10;3!CL:0000197;1.64e-09;6!CL:0000098;1.64e-09;6!CL:0002167;1.64e-09;6!CL:0000359;5.80e-09;32!CL:0002539;6.14e-09;10!CL:0000192;8.17e-09;43!CL:0002561;2.07e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.58e-13,4;CL:0002547,2.58e-13,4;CL:0002334,1.07e-12,12;CL:0002541,2.78e-11,3;CL:0000192,1.68e-10,43;CL:0000514,1.68e-10,43;CL:0002579,2.81e-10,3;CL:0000197,1.12e-09,6;CL:0000098,1.12e-09,6;CL:0002167,1.12e-09,6;CL:0000057,1.24e-09,76;CL:0000359,5.25e-09,32;CL:0002539,6.08e-09,10;CL:0002561,9.99e-08,2;CL:0000187,1.37e-07,55;CL:0000680,4.67e-07,58;CL:0000056,4.67e-07,58;CL:0000355,4.67e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;8.17e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!4.14e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.27e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.05e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.13e-10!61;UBERON:0002036!1.13e-10!61;UBERON:0003082!1.13e-10!61;UBERON:0004290!3.30e-10!70;UBERON:0001637!4.45e-10!42;UBERON:0003509!4.45e-10!42;UBERON:0004572!4.45e-10!42;UBERON:0004573!4.57e-10!33;UBERON:0004571!4.57e-10!33;UBERON:0002385!5.07e-10!63;UBERON:0001015!5.07e-10!63;UBERON:0000383!5.07e-10!63;UBERON:0002049!1.64e-09!79;UBERON:0007798!1.64e-09!79;UBERON:0000914!2.27e-09!83;UBERON:0002329!2.27e-09!83;UBERON:0003077!2.27e-09!83;UBERON:0003059!2.27e-09!83;UBERON:0007282!2.27e-09!83;UBERON:0009618!2.27e-09!83;UBERON:0007285!2.27e-09!83;UBERON:0004872!3.34e-09!84;UBERON:0001009!8.57e-09!113;UBERON:0004535!8.57e-09!110;UBERON:0000486!1.67e-08!82;UBERON:0001981!1.11e-07!60;UBERON:0007500!1.11e-07!60;UBERON:0004537!1.11e-07!60;UBERON:0006965!1.11e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.27e-14;33!UBERON:0004571;4.27e-14;33!UBERON:0004797;1.63e-13;4!UBERON:0000415;1.63e-13;4!UBERON:0007240;1.63e-13;4!UBERON:0005742;1.63e-13;4!UBERON:0005734;1.63e-13;4!UBERON:0004664;1.63e-13;4!UBERON:0004663;1.63e-13;4!UBERON:0000947;7.56e-12;21!UBERON:0010191;7.56e-12;21!UBERON:0003124;2.12e-11;3!UBERON:0000920;2.12e-11;3!UBERON:0001135;1.35e-10;15!UBERON:0001637;3.39e-09;42!UBERON:0003509;3.39e-09;42!UBERON:0004572;3.39e-09;42!UBERON:0004237;6.14e-09;10!UBERON:0004695;6.14e-09;10!UBERON:0002111;6.14e-09;10!UBERON:0004178;6.14e-09;10!UBERON:0000992;2.30e-08;13!UBERON:0003513;9.65e-08;7!UBERON:0005933;2.07e-07;2!UBERON:0005942;2.07e-07;2!UBERON:0005932;2.07e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,8.26e-15,33;UBERON:0004571,8.26e-15,33;UBERON:0000415,2.58e-13,4;UBERON:0007240,2.58e-13,4;UBERON:0005742,2.58e-13,4;UBERON:0005734,2.58e-13,4;UBERON:0004664,2.58e-13,4;UBERON:0004663,2.58e-13,4;UBERON:0000947,9.04e-12,21;UBERON:0010191,9.04e-12,21;UBERON:0000920,2.78e-11,3;UBERON:0001637,5.45e-11,42;UBERON:0003509,5.45e-11,42;UBERON:0004572,5.45e-11,42;UBERON:0001135,1.91e-10,15;UBERON:0004872,3.44e-10,83;UBERON:0004237,6.08e-09,10;UBERON:0004695,6.08e-09,10;UBERON:0002111,6.08e-09,10;UBERON:0004178,6.08e-09,10;UBERON:0003124,2.09e-08,7;UBERON:0002049,2.20e-08,78;UBERON:0007798,2.20e-08,78;UBERON:0004535,2.25e-08,109;UBERON:0007500,3.29e-08,59;UBERON:0001981,3.29e-08,59;UBERON:0004537,3.29e-08,59;UBERON:0006965,3.29e-08,59;UBERON:0000992,3.47e-08,13;UBERON:0001009,5.06e-08,112;UBERON:0003513,6.43e-08,7;UBERON:0005933,9.99e-08,2;UBERON:0005942,9.99e-08,2;UBERON:0005932,9.99e-08,2;UBERON:0004797,1.24e-07,7 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0.436882744260345,0.527533956456907,0,0,2.6893005858071,5.42425075221579,2.19093027116212,2.43966399395253,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.283604451492204,1.10864698731282,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.01304409331664,1.19168262731897,2.86836620748814,1.41867352879343,0,2.1349799145941,1.2333377420858,0.311211035399766,0.538842688278752,0.326923806226917,0.756787138224657,1.15235184896,0,0.624320153660641,0,0.448346041655403,0,0.161872944368132,0,0,0,0.206651562351531,0,1.97813543422845,0,0,0,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0.226864366320042,0.358779271377724,1.70845911054854,0.635795703478686,0,0.309157587715317,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0,0.460249493211497,0.161646056818812,0.355009592516614,0,0.339121184620975,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,1.85747171212792,1.44375896333917,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0.857867961948885,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,1.29964888536674,0,0,0,0.958499421966331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0.271265023699736,2.28767947683888,2.67643483195743,2.20783381047509,1.99140405487612,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,1.24053903909388,0.920771839728375,1.96462066103151,1.40953064181271,1.02341449813341,1.60853921143608,1.48418066444991,0,0.177561725313127,0.246381468041427,3.63478100428535,0.116210378459959,0,0,0,0.34444334449382,0.546273504020151,0.524497659837696,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0,0,0,0,0,0.48335359146061,0,0,0.137836572484531,0.214840489736547,0.435050081742686,0.426133137080504,0,0,0,0,0,0.464845549297286,11.333244485903,0,0.616067160352178,0,0,0.74129687641568,0.143124886741991,0,0.632758849437452,1.14378116354295,0,0,0,0.78494864019923,0.359744915166629,1.09814811894422,1.17812402345686,0,3.17020642346017,0.842516912477962,0,1.94970791705028,0,0,1.41405431953713,0,0.551365343546124,2.65375590096488,1.31535265576129,0,0,0.811641507850816,0.30982349809975,0,0.143411352204052,0.491245205065606,0.7133421029625,0,0,0.987884678879706,0,0,0,0,0,3.85989583184795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,3.82801391678303,1.19076871422421,13.8589041764845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0.685209623233754,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,2.52209918479682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0,0,0.326587360109409,0,0,0.681552087141687,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0.889811221596536,1.37304041038154,0,0.932623203496683,2.06997209985487,1.27437413730962,0.899606224327209,0.155262956876259,1.24411862352257,0,1.04349012362347,0.300515217994437,1.52322084867518,1.22061219961398,0.727394636810238,1.07410557042488,0,1.19428766609585,0,0.686791410365586,0,0,0,0.428883182749851,0.260994291965212,0,0.463044948647668,0,3.04451029838529,0,0.438568099157414,0,0.38582807654183,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0.786329709279482,0,0,1.48802444071178,0.867550349813015,0.558644917973244,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,9.93466545821555,0,0.685952037749674,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0,1.38783067318587,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,2.3464094240345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| |||
|short_description=p@chr9:119160673..119160717,+ | |||
}} |
Revision as of 03:01, 23 January 2014
Short description: | p@chr9:119160673..119160717, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr9:119160673..119160717, + |
Coexpression cluster: | C776_chorionic_placenta_Smooth_Aortic_Fibroblast_leiomyoma_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.58e-13 | 4 |
fibroblast of the aortic adventitia | 2.58e-13 | 4 |
preadipocyte | 1.07e-12 | 12 |
chorionic membrane mesenchymal stem cell | 2.78e-11 | 3 |
smooth muscle cell | 1.68e-10 | 43 |
smooth muscle myoblast | 1.68e-10 | 43 |
omentum preadipocyte | 2.81e-10 | 3 |
receptor cell | 1.12e-09 | 6 |
sensory epithelial cell | 1.12e-09 | 6 |
olfactory epithelial cell | 1.12e-09 | 6 |
fibroblast | 1.24e-09 | 76 |
vascular associated smooth muscle cell | 5.25e-09 | 32 |
aortic smooth muscle cell | 6.08e-09 | 10 |
outer root sheath cell | 9.99e-08 | 2 |
muscle cell | 1.37e-07 | 55 |
muscle precursor cell | 4.67e-07 | 58 |
myoblast | 4.67e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.67e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.05e-10 | 14 |