UBERON:0007524: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0007524
|name=dense mesenchyme tissue
|namespace=
|def="Mesenchyme with little extracellular matrix." [AEO:JB]
|xref=AEO:0000146;;EHDAA2:0003146
|is_...") |
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{{UBERON | {{UBERON | ||
| | |alt_id=EHDAA2:0003146 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="Mesenchyme with little extracellular matrix." [AEO:JB] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007524 | |||
|is_a=UBERON:0003104 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=dense mesenchyme tissue | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=AEO:0000146;;EHDAA2:0003146 | |||
}} | }} |
Latest revision as of 18:02, 12 September 2014
Name: | dense mesenchyme tissue | |
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Namespace: | FANTOM | |
Definition: | "Mesenchyme with little extracellular matrix." [AEO:JB] | |
Xrefs: |
| |
Alt_id: | EHDAA2:0003146 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0003104(mesenchyme) |
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Children
is a: | UBERON:0003077 (paraxial mesoderm),UBERON:0003081 (lateral plate mesoderm),UBERON:0005728 (extraembryonic mesoderm),UBERON:0005856 (developing mesenchymal condensation),UBERON:0009494 (pharyngeal arch mesenchymal region),UBERON:0010046 (entire pharyngeal arch associated mesenchyme),UBERON:0010349 (otic capsule pre-cartilage condensation) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007524 (dense mesenchyme tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data