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UBERON:0008947: Difference between revisions

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|located_in=
|located_in=
|name=respiratory primordium
|name=respiratory primordium
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0003258
|part_of=UBERON:0003258

Latest revision as of 18:04, 12 September 2014

Name:respiratory primordium
Namespace:FANTOM
Xrefs:
links:

EHDAA2:0004069

ncithesaurus:Respiratory_Primordium

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001048(primordium)
part_of:UBERON:0003258(endoderm of foregut)



Children

develops from:UBERON:0000065 (respiratory tract),UBERON:0000118 (lung bud),UBERON:0001737 (larynx),UBERON:0003126 (trachea)
part of:UBERON:0005597 (lung primordium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008947 (respiratory primordium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data