FFCP PHASE1:Hg19::chr10:110145291..110145299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:110145291..110145299,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr10:110145291..110145299,- | |description=CAGE_peak_at_chr10:110145291..110145299,- | ||
|id=chr10:110145291..110145299,- | |id=chr10:110145291..110145299,- | ||
|ontology_enrichment_celltype=CL:0002319!6.12e-10!25;CL:0000243!1.66e-09!15;CL:0000125!1.66e-09!15;CL:0000030!1.66e-09!15;CL:0000339!1.66e-09!15;CL:0000095!1.96e-08!17;CL:0000123!1.96e-08!17;CL:0000188!9.24e-08!9;CL:0002573!1.60e-07!2 | |ontology_enrichment_celltype=CL:0002319!6.12e-10!25;CL:0000243!1.66e-09!15;CL:0000125!1.66e-09!15;CL:0000030!1.66e-09!15;CL:0000339!1.66e-09!15;CL:0000095!1.96e-08!17;CL:0000123!1.96e-08!17;CL:0000188!9.24e-08!9;CL:0002573!1.60e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002573;3.35e-66;2!CL:0000243;5.12e-27;15!CL:0000125;5.12e-27;15!CL:0000095;2.73e-24;17!CL:0002319;2.09e-17;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,3.35e-66,2;CL:0000243,5.12e-27,15;CL:0000125,5.12e-27,15;CL:0000030,5.12e-27,15;CL:0000339,5.12e-27,15;CL:0000095,2.73e-24,17;CL:0000123,2.73e-24,17;CL:0002319,2.09e-17,25;CL:0000333,2.75e-11,41;CL:0000133,3.25e-08,59;CL:0000221,6.51e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.58e-50;1!CL:0000339;5.12e-27;15!UBERON:0003056;1.12e-17;3 | |||
|ontology_enrichment_disease=DOID:2394!3.96e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.58e-50;1!UBERON:0001785;6.58e-50;1!UBERON:0002464;6.58e-50;1!UBERON:0004904;6.58e-50;1!UBERON:0001021;6.58e-50;1!UBERON:0000010;9.25e-50;8!UBERON:0003714;9.18e-26;2!UBERON:0005162;9.18e-26;2!UBERON:0000122;9.18e-26;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.58e-50,1;UBERON:0001785,6.58e-50,1;UBERON:0002464,6.58e-50,1;UBERON:0004904,6.58e-50,1;UBERON:0001021,6.58e-50,1;UBERON:0003902,6.58e-50,1;UBERON:0005425,6.58e-50,1;UBERON:0000010,9.25e-50,8;UBERON:0003714,9.18e-26,2;UBERON:0005162,9.18e-26,2;UBERON:0000122,9.18e-26,2;UBERON:0001781,1.29e-13,4;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6;UBERON:0001016,1.88e-09,89 | |||
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| ||
|short_description=p@chr10:110145291..110145299,- | |short_description=p@chr10:110145291..110145299,- | ||
}} | }} |
Latest revision as of 10:14, 23 July 2015
Short description: | p@chr10:110145291..110145299, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:110145291..110145299, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 3.35e-66 | 2 |
glial cell (sensu Vertebrata) | 5.12e-27 | 15 |
glial cell | 5.12e-27 | 15 |
glioblast | 5.12e-27 | 15 |
glioblast (sensu Vertebrata) | 5.12e-27 | 15 |
neuron associated cell | 2.73e-24 | 17 |
neuron associated cell (sensu Vertebrata) | 2.73e-24 | 17 |
neural cell | 2.09e-17 | 25 |
migratory neural crest cell | 2.75e-11 | 41 |
neurectodermal cell | 3.25e-08 | 59 |
ectodermal cell | 6.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.58e-50 | 1 |
cranial nerve | 6.58e-50 | 1 |
nerve trunk | 6.58e-50 | 1 |
nerve connecting eye with brain | 6.58e-50 | 1 |
nerve | 6.58e-50 | 1 |
retinal neural layer | 6.58e-50 | 1 |
presumptive neural retina | 6.58e-50 | 1 |
peripheral nervous system | 9.25e-50 | 8 |
neural tissue | 9.18e-26 | 2 |
multi cell component structure | 9.18e-26 | 2 |
neuron projection bundle | 9.18e-26 | 2 |
layer of retina | 1.29e-13 | 4 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |