FFCP PHASE1:Hg19::chr10:114138015..114138020,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:114138015..114138020,+ | |||
|description=CAGE_peak_at_chr10:114138015..114138020,+ | |description=CAGE_peak_at_chr10:114138015..114138020,+ | ||
|id=chr10:114138015..114138020,+ | |id=chr10:114138015..114138020,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.70e-46!45;CL:0002057!1.71e-43!42;CL:0002009!1.56e-36!65;CL:0002194!3.40e-36!63;CL:0000576!3.40e-36!63;CL:0000040!3.40e-36!63;CL:0000559!3.40e-36!63;CL:0000557!2.03e-35!71;CL:0000839!2.49e-34!70;CL:0000766!5.00e-34!76;CL:0002087!7.15e-33!119;CL:0002031!8.21e-32!124;CL:0000738!4.96e-31!140;CL:0000037!1.12e-26!172;CL:0000566!1.12e-26!172;CL:0002032!1.89e-26!165;CL:0000837!1.89e-26!165;CL:0000763!3.03e-25!112;CL:0000049!3.03e-25!112;CL:0000988!4.39e-24!182 | |ontology_enrichment_celltype=CL:0000860!1.70e-46!45;CL:0002057!1.71e-43!42;CL:0002009!1.56e-36!65;CL:0002194!3.40e-36!63;CL:0000576!3.40e-36!63;CL:0000040!3.40e-36!63;CL:0000559!3.40e-36!63;CL:0000557!2.03e-35!71;CL:0000839!2.49e-34!70;CL:0000766!5.00e-34!76;CL:0002087!7.15e-33!119;CL:0002031!8.21e-32!124;CL:0000738!4.96e-31!140;CL:0000037!1.12e-26!172;CL:0000566!1.12e-26!172;CL:0002032!1.89e-26!165;CL:0000837!1.89e-26!165;CL:0000763!3.03e-25!112;CL:0000049!3.03e-25!112;CL:0000988!4.39e-24!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.49e-51;33!CL:0002057;5.49e-51;33!CL:0000473;1.58e-36;39!CL:0000234;1.58e-36;39!CL:0000576;1.86e-33;48!CL:0000766;6.39e-20;69!CL:0002393;2.27e-11;6!CL:0002397;2.27e-11;6!CL:0002087;2.06e-10;104!CL:0000763;2.48e-08;100!CL:0000738;8.11e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.44e-64,42;CL:0002057,1.44e-64,42;CL:0000473,4.79e-56,48;CL:0000234,4.79e-56,48;CL:0002194,4.14e-44,59;CL:0000576,4.14e-44,59;CL:0000040,4.14e-44,59;CL:0000559,4.14e-44,59;CL:0002009,1.44e-42,61;CL:0000839,4.06e-39,66;CL:0000557,1.73e-38,67;CL:0000766,1.34e-35,72;CL:0002087,2.34e-23,115;CL:0000763,1.31e-22,108;CL:0000049,1.31e-22,108;CL:0002031,3.13e-22,120;CL:0000738,3.54e-19,136;CL:0002032,1.31e-15,161;CL:0000837,1.31e-15,161;CL:0000037,8.45e-15,168;CL:0000988,7.51e-14,177;CL:0002393,9.58e-08,9;CL:0002397,9.58e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.77e-45;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.34e-30!80;UBERON:0002193!8.42e-28!112;UBERON:0001474!9.99e-27!86;UBERON:0002405!1.10e-26!115;UBERON:0002390!1.33e-26!102;UBERON:0003061!1.33e-26!102;UBERON:0004765!1.12e-20!101;UBERON:0001434!1.12e-20!101;UBERON:0002204!3.21e-08!167;UBERON:0003081!3.00e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.12e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-33,76;UBERON:0001474,7.30e-31,82;UBERON:0002390,5.06e-28,98;UBERON:0003061,5.06e-28,98;UBERON:0004765,8.02e-28,90;UBERON:0002405,8.15e-27,93;UBERON:0002193,4.27e-25,108;UBERON:0001434,1.07e-24,100;UBERON:0002204,5.74e-15,167;UBERON:0002108,1.22e-13,4;UBERON:0003081,1.42e-11,203;UBERON:0000926,6.64e-07,315;UBERON:0004120,6.64e-07,315;UBERON:0006603,6.64e-07,315 | |||
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| ||
|short_description=p@chr10:114138015..114138020,+ | |short_description=p@chr10:114138015..114138020,+ | ||
}} | }} |
Latest revision as of 10:31, 23 July 2015
Short description: | p@chr10:114138015..114138020, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:114138015..114138020, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.44e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-64 | 42 |
defensive cell | 4.79e-56 | 48 |
phagocyte | 4.79e-56 | 48 |
monopoietic cell | 4.14e-44 | 59 |
monocyte | 4.14e-44 | 59 |
monoblast | 4.14e-44 | 59 |
promonocyte | 4.14e-44 | 59 |
macrophage dendritic cell progenitor | 1.44e-42 | 61 |
myeloid lineage restricted progenitor cell | 4.06e-39 | 66 |
granulocyte monocyte progenitor cell | 1.73e-38 | 67 |
myeloid leukocyte | 1.34e-35 | 72 |
nongranular leukocyte | 2.34e-23 | 115 |
myeloid cell | 1.31e-22 | 108 |
common myeloid progenitor | 1.31e-22 | 108 |
hematopoietic lineage restricted progenitor cell | 3.13e-22 | 120 |
leukocyte | 3.54e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.31e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-15 | 161 |
hematopoietic stem cell | 8.45e-15 | 168 |
hematopoietic cell | 7.51e-14 | 177 |
intermediate monocyte | 9.58e-08 | 9 |
CD14-positive, CD16-positive monocyte | 9.58e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.48e-33 | 76 |
bone element | 7.30e-31 | 82 |
hematopoietic system | 5.06e-28 | 98 |
blood island | 5.06e-28 | 98 |
skeletal element | 8.02e-28 | 90 |
immune system | 8.15e-27 | 93 |
hemolymphoid system | 4.27e-25 | 108 |
skeletal system | 1.07e-24 | 100 |
musculoskeletal system | 5.74e-15 | 167 |
small intestine | 1.22e-13 | 4 |
lateral plate mesoderm | 1.42e-11 | 203 |
mesoderm | 6.64e-07 | 315 |
mesoderm-derived structure | 6.64e-07 | 315 |
presumptive mesoderm | 6.64e-07 | 315 |