FFCP PHASE1:Hg19::chr10:125979131..125979136,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125979131..125979136,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:125979131..125979136,- | |description=CAGE_peak_at_chr10:125979131..125979136,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!2.07e-93!42;CL:0000860!1.91e-86!45;CL:0000766!7.27e-83!76;CL:0002194!2.03e-74!63;CL:0000576!2.03e-74!63;CL:0000040!2.03e-74!63;CL:0000559!2.03e-74!63;CL:0000839!2.87e-72!70;CL:0002009!8.47e-72!65;CL:0000557!4.30e-71!71;CL:0000738!2.73e-57!140;CL:0000763!3.09e-52!112;CL:0000049!3.09e-52!112;CL:0002087!4.47e-50!119;CL:0002031!3.61e-45!124;CL:0000037!5.18e-44!172;CL:0000566!5.18e-44!172;CL:0000988!8.14e-41!182;CL:0002032!3.42e-39!165;CL:0000837!3.42e-39!165;CL:0000134!5.27e-17!358;CL:0002320!2.14e-16!365;CL:0000219!3.00e-14!390;CL:0000034!5.16e-13!444;CL:0000048!2.13e-12!430;CL:0000723!5.06e-12!436;CL:0000767!2.38e-09!3;CL:0000842!7.45e-09!3;CL:0000094!9.72e-09!8;CL:0002393!9.79e-08!9;CL:0002397!9.79e-08!9;CL:0000224!9.87e-07!4 | |ontology_enrichment_celltype=CL:0002057!2.07e-93!42;CL:0000860!1.91e-86!45;CL:0000766!7.27e-83!76;CL:0002194!2.03e-74!63;CL:0000576!2.03e-74!63;CL:0000040!2.03e-74!63;CL:0000559!2.03e-74!63;CL:0000839!2.87e-72!70;CL:0002009!8.47e-72!65;CL:0000557!4.30e-71!71;CL:0000738!2.73e-57!140;CL:0000763!3.09e-52!112;CL:0000049!3.09e-52!112;CL:0002087!4.47e-50!119;CL:0002031!3.61e-45!124;CL:0000037!5.18e-44!172;CL:0000566!5.18e-44!172;CL:0000988!8.14e-41!182;CL:0002032!3.42e-39!165;CL:0000837!3.42e-39!165;CL:0000134!5.27e-17!358;CL:0002320!2.14e-16!365;CL:0000219!3.00e-14!390;CL:0000034!5.16e-13!444;CL:0000048!2.13e-12!430;CL:0000723!5.06e-12!436;CL:0000767!2.38e-09!3;CL:0000842!7.45e-09!3;CL:0000094!9.72e-09!8;CL:0002393!9.79e-08!9;CL:0002397!9.79e-08!9;CL:0000224!9.87e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.81e-109;33!CL:0002057;9.81e-109;33!CL:0000473;1.10e-85;39!CL:0000234;1.10e-85;39!CL:0000576;2.11e-63;48!CL:0000766;9.01e-47;69!CL:0000763;7.92e-21;100!CL:0002087;2.88e-17;104!CL:0000767;8.35e-14;3!CL:0000094;2.12e-13;8!CL:0000738;9.52e-13;136!CL:0002393;5.50e-12;6!CL:0002397;5.50e-12;6!CL:0000081;1.11e-09;11!CL:0000988;4.89e-07;177 | |ontology_enrichment_celltype_v019=CL:0000860;9.81e-109;33!CL:0002057;9.81e-109;33!CL:0000473;1.10e-85;39!CL:0000234;1.10e-85;39!CL:0000576;2.11e-63;48!CL:0000766;9.01e-47;69!CL:0000763;7.92e-21;100!CL:0002087;2.88e-17;104!CL:0000767;8.35e-14;3!CL:0000094;2.12e-13;8!CL:0000738;9.52e-13;136!CL:0002393;5.50e-12;6!CL:0002397;5.50e-12;6!CL:0000081;1.11e-09;11!CL:0000988;4.89e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-119,42;CL:0002057,1.71e-119,42;CL:0000473,4.26e-116,48;CL:0000234,4.26e-116,48;CL:0000766,8.91e-97,72;CL:0002194,2.35e-91,59;CL:0000576,2.35e-91,59;CL:0000040,2.35e-91,59;CL:0000559,2.35e-91,59;CL:0002009,3.67e-88,61;CL:0000839,5.18e-81,66;CL:0000557,1.04e-79,67;CL:0000763,3.67e-62,108;CL:0000049,3.67e-62,108;CL:0000738,4.06e-53,136;CL:0002087,5.53e-49,115;CL:0000037,1.67e-41,168;CL:0002031,2.05e-41,120;CL:0002032,3.66e-39,161;CL:0000837,3.66e-39,161;CL:0000988,5.50e-39,177;CL:0000134,2.39e-15,354;CL:0002320,6.93e-15,361;CL:0000767,7.64e-14,3;CL:0000094,2.21e-13,8;CL:0000219,2.96e-13,386;CL:0000034,2.32e-12,441;CL:0000048,2.93e-11,427;CL:0000723,5.53e-11,433;CL:0000081,1.14e-09,11;CL:0002393,5.27e-08,9;CL:0002397,5.27e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.63e-88;42!CL:0000049;3.49e-20;108 | |ontology_enrichment_development_v019=CL:0002057;7.63e-88;42!CL:0000049;3.49e-20;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.11e-62!80;UBERON:0002390!4.30e-58!102;UBERON:0003061!4.30e-58!102;UBERON:0001474!1.06e-56!86;UBERON:0002193!8.79e-52!112;UBERON:0004765!1.49e-46!101;UBERON:0001434!1.49e-46!101;UBERON:0002405!2.29e-41!115;UBERON:0002204!7.92e-25!167;UBERON:0003081!7.63e-22!216;UBERON:0002384!3.27e-17!375 | |ontology_enrichment_uberon=UBERON:0002371!8.11e-62!80;UBERON:0002390!4.30e-58!102;UBERON:0003061!4.30e-58!102;UBERON:0001474!1.06e-56!86;UBERON:0002193!8.79e-52!112;UBERON:0004765!1.49e-46!101;UBERON:0001434!1.49e-46!101;UBERON:0002405!2.29e-41!115;UBERON:0002204!7.92e-25!167;UBERON:0003081!7.63e-22!216;UBERON:0002384!3.27e-17!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.70e-69,76;UBERON:0001474,6.47e-64,82;UBERON:0002390,9.39e-59,98;UBERON:0003061,9.39e-59,98;UBERON:0004765,1.28e-57,90;UBERON:0002405,1.56e-55,93;UBERON:0002193,1.22e-52,108;UBERON:0001434,3.77e-51,100;UBERON:0002204,1.20e-27,167;UBERON:0003081,2.10e-24,203;UBERON:0002384,2.96e-14,371;UBERON:0000926,6.89e-13,315;UBERON:0004120,6.89e-13,315;UBERON:0006603,6.89e-13,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,4.22212337906934,5.26374819274658,0,0,0,0,0,0,6.64794490238253,10.4283112684474,8.89744569934992,0.447830948479849,0,0,3.34415949192999,1.51150377475524,1.69808842831471,46.0209493073256,34.1269347058115,68.754814338713,75.3754067884034,54.5622304906984,57.2286996330376,105.492178305405,122.642089880927,143.552075790002,19.9536879915161,11.1891521523717,18.4273257244969,43.4639127166682,38.5114832491312,36.4422161705454,2.63881040149373,2.79249120670285,2.55734850319616,24.3775760448011,20.425868088881,17.4390229718761,71.6058695981718,44.8475309841373,51.0393785057024,6.05399502633369,21.3601028872788,14.5572698222807,0,1.06302149982522,0.838634582033504,0.898629049171961,0.600707571366025,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,4.22212337906934,5.26374819274658,0,0,0,0,0,0,6.64794490238253,10.4283112684474,8.89744569934992,0.447830948479849,0,0,3.34415949192999,1.51150377475524,1.69808842831471,46.0209493073256,34.1269347058115,68.754814338713,75.3754067884034,54.5622304906984,57.2286996330376,105.492178305405,122.642089880927,143.552075790002,19.9536879915161,11.1891521523717,18.4273257244969,43.4639127166682,38.5114832491312,36.4422161705454,2.63881040149373,2.79249120670285,2.55734850319616,24.3775760448011,20.425868088881,17.4390229718761,71.6058695981718,44.8475309841373,51.0393785057024,6.05399502633369,21.3601028872788,14.5572698222807,0,1.06302149982522,0.838634582033504,0.898629049171961,0.600707571366025,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:125979131..125979136,- | |short_description=p@chr10:125979131..125979136,- | ||
}} | }} |
Latest revision as of 11:20, 23 July 2015
Short description: | p@chr10:125979131..125979136, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125979131..125979136, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.70e-69 | 76 |
bone element | 6.47e-64 | 82 |
hematopoietic system | 9.39e-59 | 98 |
blood island | 9.39e-59 | 98 |
skeletal element | 1.28e-57 | 90 |
immune system | 1.56e-55 | 93 |
hemolymphoid system | 1.22e-52 | 108 |
skeletal system | 3.77e-51 | 100 |
musculoskeletal system | 1.20e-27 | 167 |
lateral plate mesoderm | 2.10e-24 | 203 |
connective tissue | 2.96e-14 | 371 |
mesoderm | 6.89e-13 | 315 |
mesoderm-derived structure | 6.89e-13 | 315 |
presumptive mesoderm | 6.89e-13 | 315 |