FFCP PHASE1:Hg19::chr10:126847417..126847439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126847417..126847439,+ | |||
|coexpression_cluster_id=C646 | |coexpression_cluster_id=C646 | ||
|description=CAGE_peak_at_chr10:126847417..126847439,+ | |description=CAGE_peak_at_chr10:126847417..126847439,+ | ||
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|ontology_enrichment_celltype=CL:0002057!1.73e-24!42;CL:0000860!2.35e-23!45;CL:0000557!9.04e-20!71;CL:0000766!1.37e-19!76;CL:0002009!1.62e-18!65;CL:0000839!1.32e-17!70;CL:0000763!1.71e-17!112;CL:0000049!1.71e-17!112;CL:0002194!2.40e-17!63;CL:0000576!2.40e-17!63;CL:0000040!2.40e-17!63;CL:0000559!2.40e-17!63;CL:0000115!2.46e-10!35;CL:0002139!8.45e-10!24;CL:0000071!6.31e-09!18;CL:0002546!6.31e-09!18;CL:0002078!2.36e-08!44;CL:0000222!3.76e-08!119;CL:0000213!1.17e-07!57;CL:0000215!1.17e-07!57 | |ontology_enrichment_celltype=CL:0002057!1.73e-24!42;CL:0000860!2.35e-23!45;CL:0000557!9.04e-20!71;CL:0000766!1.37e-19!76;CL:0002009!1.62e-18!65;CL:0000839!1.32e-17!70;CL:0000763!1.71e-17!112;CL:0000049!1.71e-17!112;CL:0002194!2.40e-17!63;CL:0000576!2.40e-17!63;CL:0000040!2.40e-17!63;CL:0000559!2.40e-17!63;CL:0000115!2.46e-10!35;CL:0002139!8.45e-10!24;CL:0000071!6.31e-09!18;CL:0002546!6.31e-09!18;CL:0002078!2.36e-08!44;CL:0000222!3.76e-08!119;CL:0000213!1.17e-07!57;CL:0000215!1.17e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-38;33!CL:0002057;1.49e-38;33!CL:0000473;9.47e-28;39!CL:0000234;9.47e-28;39!CL:0000576;6.64e-23;48!CL:0000766;3.39e-19;69!CL:0002139;4.91e-13;24!CL:0000071;7.20e-11;18!CL:0000763;1.06e-09;100!CL:0000115;1.02e-08;36 | |ontology_enrichment_celltype_v019=CL:0000860;1.49e-38;33!CL:0002057;1.49e-38;33!CL:0000473;9.47e-28;39!CL:0000234;9.47e-28;39!CL:0000576;6.64e-23;48!CL:0000766;3.39e-19;69!CL:0002139;4.91e-13;24!CL:0000071;7.20e-11;18!CL:0000763;1.06e-09;100!CL:0000115;1.02e-08;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.95e-45,42;CL:0002057,8.95e-45,42;CL:0000473,7.46e-40,48;CL:0000234,7.46e-40,48;CL:0000766,2.76e-36,72;CL:0000557,6.14e-35,67;CL:0002009,1.69e-31,61;CL:0000839,5.21e-30,66;CL:0002194,4.54e-29,59;CL:0000576,4.54e-29,59;CL:0000040,4.54e-29,59;CL:0000559,4.54e-29,59;CL:0000763,4.09e-27,108;CL:0000049,4.09e-27,108;CL:0000738,4.66e-16,136;CL:0000037,3.60e-14,168;CL:0002032,4.86e-14,161;CL:0000837,4.86e-14,161;CL:0002031,8.32e-14,120;CL:0002139,3.07e-13,24;CL:0000988,3.23e-13,177;CL:0000071,1.95e-11,18;CL:0002546,1.95e-11,18;CL:0002087,4.94e-11,115;CL:0000115,9.06e-11,36;CL:0002078,1.91e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002057;9.47e-33;42!CL:0002546;7.20e-11;18!CL:0000049;1.40e-07;108 | |ontology_enrichment_development_v019=CL:0002057;9.47e-33;42!CL:0002546;7.20e-11;18!CL:0000049;1.40e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;7.20e-11;18!UBERON:0001986;7.20e-11;18!UBERON:0004852;7.20e-11;18!UBERON:0000487;2.96e-08;22!UBERON:0006914;7.23e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0004638;7.20e-11;18!UBERON:0001986;7.20e-11;18!UBERON:0004852;7.20e-11;18!UBERON:0000487;2.96e-08;22!UBERON:0006914;7.23e-07;25 | ||
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|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,1.78784437770915,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0.247532705920093,0,0,0,0.730310090387373,0.975865597581014,0.61560529038394,1.02000345622126,0,0,0.547497700291537,0.376627918784408,0,0,0,3.14691421479123,0,1.08371286321253,3.67768489791571,0.30120591877825,0,0,0,2.93600439334847,3.32397245119126,2.60707781711184,2.38711957787437,0.671746422719773,0.647787332037959,0.515151135268373,2.76256653681173,3.40088349319928,4.85168122375632,7.67015821788759,4.11167888021826,8.3620720141678,4.31538588483226,3.07392847834921,4.49316236788312,9.99762474136194,12.2642089880927,14.8969135253776,2.63539275359647,3.27487380069415,3.59557575112135,5.81559395504715,4.17207735198922,7.03270838378945,2.63881040149373,1.59570926097305,1.70489900213078,8.41606792022894,11.9150897185139,13.0792672289071,3.51748131359441,1.5644487552606,5.42972111762792,9.6863920421339,9.20694089968912,7.27863491114034,0.633765858935825,0.425208599930087,1.67726916406701,0.673971786878971,1.80212271409808,1.12507910687956,1.14005097496499,0.99458338599545,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,2.80254281490768,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0.534880391567015,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0.472674085820339,0,0.175669571386252,0.392937226493138,0,0.370784442784429,0.324547393654683,0.348259474598534,0,0.238490624305342,0,0.371457501329565,0.993812036833525,1.72046919021225,1.73570250803797,1.13061588384802,0.838998872419812,1.6507082516404,1.8809546988313,0,1.06729878806013,2.00832367658802,1.61131726843659,3.80136052859256,3.90499292077071,1.83831540172934,1.62028389576352,0.535798369704479,1.12264686313085,1.0135033243499,1.53316637465883,3.79706263827252,0.916008719652036,2.63560834872127,0,0,0,0,0.529636723252875,0.573673241497627,0,0,2.1349799145941,0.49333509683432,0.311211035399766,0.269421344139376,0.817309515567294,0.605429710579726,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.23486899728753,0.485618833104395,0.561803226808994,0,0.122834317311768,0.103325781175765,0,0.741800787835671,1.82032272387605,1.43723628363248,0,0.125118519871964,0,0.438977620880838,0,0.600952235626387,0,0.179389635688862,0.427114777637135,0.211931901159562,0.900273288253207,0.309157587715317,0.772921620136887,0.558350568994769,0.337552664482532,0.292311015483596,0.757301322732344,0.368199594569197,0.161646056818812,0,0.503760491138201,0.67824236924195,0.57978255948989,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.621966330092223,0,0,0,0,2.76269842704961,0.464367928031979,0,0.118306800039844,0.337169380156203,0.723033089650446,0.661763836394364,0,0.237270619111097,0.404493924480493,1.56977172100277,1.53898862778556,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.115930404975077,0.234817388471643,1.01056513432752,2.31492756288305,0.761016608938393,1.58040879591855,0.858486162094873,0.492434012174795,0.936017060556951,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,9.12243708379397,5.33243827642757,8.96321277327298,0.063497894292169,0.381988425558278,0,1.71072446022705,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0,0.129271715757778,3.57656445851882,0.845302752556,0.531876233169741,0,0,0,0.799266537048298,0.57191197463259,2.17048642156577,0,0.65147236858747,0,0,0.301439377059586,0,0.099972991182057,3.64871341923571,0.502257091432126,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.336255431980582,0.591092280605782,1.50939302401662,1.41177339907723,0.254094624222463,1.30139853857622,1.54657762555539,0.335032530668698,0.637938751653163,2.24702107184155,2.99161459204025,2.90090859405225,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0.921845842708516,0.521301686808497,0.391602314925481,0.686286847621712,0.206768026122887,1.07857100409308,0.640365346820666,0.909382714338778,1.66435439510497,0.604780586659361,0.744323423456331,0.153461973288062,0.561320188866147,0.640695746278505,0,0.321707842287215,0,0,0,0.246381468041427,0.519254429183621,0.232420756919918,0,0.40101294060657,0,0,0.546273504020151,0,0.451199612907412,0.15403067420883,0,0,0.211103257785751,2.27466768141793,1.36074964221213,0.215915916102139,9.25363516141736,0.270946437543853,0.501689773854853,0,1.66215201785745,0.223874754722178,0,0.784306353074702,0,0,0.325378394664303,0.9273691048295,0.366277859273374,0.082509499920588,0.574265537996172,0.650060246036521,0,0.773365746336976,0.462145851343933,0.614014698904518,0.275673144969061,0.214840489736547,0.290033387828457,0.255679882248303,0.445160178233687,0,0.384380134730212,0.255225424989168,0,0,0,2.0911118104818,0.924100740528266,1.06461206063404,3.47973196830029,0.37064843820784,0.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| ||
|short_description=p@chr10:126847417..126847439,+ | |short_description=p@chr10:126847417..126847439,+ | ||
}} | }} |
Latest revision as of 11:26, 23 July 2015
Short description: | p@chr10:126847417..126847439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126847417..126847439, + |
Coexpression cluster: | C646_CD14_Mast_vagina_thymus_MCF7_immature_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.95e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.95e-45 | 42 |
defensive cell | 7.46e-40 | 48 |
phagocyte | 7.46e-40 | 48 |
myeloid leukocyte | 2.76e-36 | 72 |
granulocyte monocyte progenitor cell | 6.14e-35 | 67 |
macrophage dendritic cell progenitor | 1.69e-31 | 61 |
myeloid lineage restricted progenitor cell | 5.21e-30 | 66 |
monopoietic cell | 4.54e-29 | 59 |
monocyte | 4.54e-29 | 59 |
monoblast | 4.54e-29 | 59 |
promonocyte | 4.54e-29 | 59 |
myeloid cell | 4.09e-27 | 108 |
common myeloid progenitor | 4.09e-27 | 108 |
leukocyte | 4.66e-16 | 136 |
hematopoietic stem cell | 3.60e-14 | 168 |
hematopoietic oligopotent progenitor cell | 4.86e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.86e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 8.32e-14 | 120 |
endothelial cell of vascular tree | 3.07e-13 | 24 |
hematopoietic cell | 3.23e-13 | 177 |
blood vessel endothelial cell | 1.95e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.95e-11 | 18 |
nongranular leukocyte | 4.94e-11 | 115 |
endothelial cell | 9.06e-11 | 36 |
meso-epithelial cell | 1.91e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-30 | 76 |
immune system | 1.22e-29 | 93 |
hemolymphoid system | 1.30e-28 | 108 |
bone element | 1.34e-28 | 82 |
lateral plate mesoderm | 2.97e-27 | 203 |
hematopoietic system | 1.10e-25 | 98 |
blood island | 1.10e-25 | 98 |
skeletal element | 1.13e-24 | 90 |
skeletal system | 1.10e-20 | 100 |
musculoskeletal system | 1.63e-13 | 167 |
mesoderm | 4.57e-13 | 315 |
mesoderm-derived structure | 4.57e-13 | 315 |
presumptive mesoderm | 4.57e-13 | 315 |
blood vessel endothelium | 1.95e-11 | 18 |
endothelium | 1.95e-11 | 18 |
cardiovascular system endothelium | 1.95e-11 | 18 |
vessel | 7.10e-10 | 68 |
simple squamous epithelium | 1.07e-08 | 22 |
vasculature | 1.30e-07 | 78 |
vascular system | 1.30e-07 | 78 |
epithelial tube open at both ends | 2.59e-07 | 59 |
blood vessel | 2.59e-07 | 59 |
blood vasculature | 2.59e-07 | 59 |
vascular cord | 2.59e-07 | 59 |
squamous epithelium | 3.07e-07 | 25 |