FFCP PHASE1:Hg19::chr10:134143566..134143586,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:134143566..134143586,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_at_chr10:134143566..134143586,+ | |description=CAGE_peak_at_chr10:134143566..134143586,+ | ||
|id=chr10:134143566..134143586,+ | |id=chr10:134143566..134143586,+ | ||
|ontology_enrichment_celltype=CL:0000557!9.70e-42!71;CL:0000860!9.71e-42!45;CL:0000766!1.98e-40!76;CL:0000839!2.60e-40!70;CL:0002057!1.57e-37!42;CL:0002009!9.09e-37!65;CL:0002194!4.13e-36!63;CL:0000576!4.13e-36!63;CL:0000040!4.13e-36!63;CL:0000559!4.13e-36!63;CL:0000763!6.89e-32!112;CL:0000049!6.89e-32!112;CL:0002031!3.92e-27!124;CL:0000738!3.08e-26!140;CL:0002032!2.22e-24!165;CL:0000837!2.22e-24!165;CL:0000037!7.45e-24!172;CL:0000566!7.45e-24!172;CL:0002087!6.73e-23!119;CL:0000988!1.14e-21!182;CL:0000134!1.62e-09!358;CL:0002320!5.11e-09!365;CL:0000219!1.05e-08!390;CL:0002274!1.36e-07!5;CL:0000457!1.36e-07!5;CL:0002191!1.36e-07!5;CL:0000097!1.36e-07!5;CL:0000831!1.36e-07!5;CL:0002028!1.36e-07!5 | |ontology_enrichment_celltype=CL:0000557!9.70e-42!71;CL:0000860!9.71e-42!45;CL:0000766!1.98e-40!76;CL:0000839!2.60e-40!70;CL:0002057!1.57e-37!42;CL:0002009!9.09e-37!65;CL:0002194!4.13e-36!63;CL:0000576!4.13e-36!63;CL:0000040!4.13e-36!63;CL:0000559!4.13e-36!63;CL:0000763!6.89e-32!112;CL:0000049!6.89e-32!112;CL:0002031!3.92e-27!124;CL:0000738!3.08e-26!140;CL:0002032!2.22e-24!165;CL:0000837!2.22e-24!165;CL:0000037!7.45e-24!172;CL:0000566!7.45e-24!172;CL:0002087!6.73e-23!119;CL:0000988!1.14e-21!182;CL:0000134!1.62e-09!358;CL:0002320!5.11e-09!365;CL:0000219!1.05e-08!390;CL:0002274!1.36e-07!5;CL:0000457!1.36e-07!5;CL:0002191!1.36e-07!5;CL:0000097!1.36e-07!5;CL:0000831!1.36e-07!5;CL:0002028!1.36e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.21e-95;33!CL:0002057;4.21e-95;33!CL:0000473;8.13e-66;39!CL:0000234;8.13e-66;39!CL:0000576;4.87e-47;48!CL:0000766;5.04e-29;69!CL:0000763;1.27e-15;100!CL:0000097;5.50e-15;5!CL:0002087;1.21e-10;104!CL:0000738;2.04e-09;136!CL:0000163;1.47e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.96e-80,42;CL:0002057,1.96e-80,42;CL:0000473,5.68e-70,48;CL:0000234,5.68e-70,48;CL:0000839,4.68e-65,66;CL:0000557,4.76e-64,67;CL:0000766,2.00e-59,72;CL:0002194,2.57e-55,59;CL:0000576,2.57e-55,59;CL:0000040,2.57e-55,59;CL:0000559,2.57e-55,59;CL:0002009,2.00e-53,61;CL:0000763,1.24e-38,108;CL:0000049,1.24e-38,108;CL:0002031,1.90e-34,120;CL:0000738,5.31e-30,136;CL:0002087,5.83e-27,115;CL:0002032,8.33e-25,161;CL:0000837,8.33e-25,161;CL:0000037,1.26e-23,168;CL:0000988,3.05e-22,177;CL:0000097,5.63e-15,5;CL:0002028,5.63e-15,5;CL:0000134,3.19e-09,354;CL:0002320,5.76e-09,361;CL:0000163,1.49e-08,9;CL:0000219,4.61e-08,386;CL:0000048,5.92e-07,427;CL:0000723,8.42e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-63;42!CL:0000049;7.00e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.23e-37!80;UBERON:0001474!4.19e-34!86;UBERON:0002390!1.55e-32!102;UBERON:0003061!1.55e-32!102;UBERON:0004765!1.10e-28!101;UBERON:0001434!1.10e-28!101;UBERON:0002193!2.15e-28!112;UBERON:0002405!3.43e-27!115;UBERON:0002204!3.35e-13!167;UBERON:0003081!3.48e-11!216;UBERON:0002384!7.72e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!1.23e-37!80;UBERON:0001474!4.19e-34!86;UBERON:0002390!1.55e-32!102;UBERON:0003061!1.55e-32!102;UBERON:0004765!1.10e-28!101;UBERON:0001434!1.10e-28!101;UBERON:0002193!2.15e-28!112;UBERON:0002405!3.43e-27!115;UBERON:0002204!3.35e-13!167;UBERON:0003081!3.48e-11!216;UBERON:0002384!7.72e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.71e-56,76;UBERON:0001474,7.60e-52,82;UBERON:0004765,5.59e-47,90;UBERON:0002405,2.29e-45,93;UBERON:0002390,6.76e-43,98;UBERON:0003061,6.76e-43,98;UBERON:0001434,5.62e-42,100;UBERON:0002193,1.24e-38,108;UBERON:0002204,8.69e-24,167;UBERON:0003081,6.25e-19,203;UBERON:0000926,4.41e-12,315;UBERON:0004120,4.41e-12,315;UBERON:0006603,4.41e-12,315;UBERON:0002384,1.29e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,3.48955773070955,6.04601509902095,1.94067248950253,1.16214518452842,3.70051099219643,1.23882548358041,1.1507695692886,2.0492856522328,1.89185783910868,0,1.29096936716765,2.70852973188684,3.20011977222428,3.547779950752,4.04502272001152,1.22433556948361,1.28371610830437,0.639337125799041,2.30895910130701,4.78712778291916,0.426224750532694,0.290209238628584,0,0.622822248995575,3.26623264833766,5.21482918420201,4.12658804939722,0,0.368277635987565,0.949387162322653,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.523916301990851,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.616339038092582,3.10992173311158,1.29707958075265,2.5248486685276,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0.432164393964449,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.303114792872958,1.33982065078089,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,3.48955773070955,6.04601509902095,1.94067248950253,1.16214518452842,3.70051099219643,1.23882548358041,1.1507695692886,2.0492856522328,1.89185783910868,0,1.29096936716765,2.70852973188684,3.20011977222428,3.547779950752,4.04502272001152,1.22433556948361,1.28371610830437,0.639337125799041,2.30895910130701,4.78712778291916,0.426224750532694,0.290209238628584,0,0.622822248995575,3.26623264833766,5.21482918420201,4.12658804939722,0,0.368277635987565,0.949387162322653,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.523916301990851,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.616339038092582,3.10992173311158,1.29707958075265,2.5248486685276,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0.432164393964449,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.303114792872958,1.33982065078089,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr10:134143566..134143586,+ | |short_description=p@chr10:134143566..134143586,+ | ||
}} | }} |
Latest revision as of 11:45, 23 July 2015
Short description: | p@chr10:134143566..134143586, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134143566..134143586, + |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.96e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-80 | 42 |
defensive cell | 5.68e-70 | 48 |
phagocyte | 5.68e-70 | 48 |
myeloid lineage restricted progenitor cell | 4.68e-65 | 66 |
granulocyte monocyte progenitor cell | 4.76e-64 | 67 |
myeloid leukocyte | 2.00e-59 | 72 |
monopoietic cell | 2.57e-55 | 59 |
monocyte | 2.57e-55 | 59 |
monoblast | 2.57e-55 | 59 |
promonocyte | 2.57e-55 | 59 |
macrophage dendritic cell progenitor | 2.00e-53 | 61 |
myeloid cell | 1.24e-38 | 108 |
common myeloid progenitor | 1.24e-38 | 108 |
hematopoietic lineage restricted progenitor cell | 1.90e-34 | 120 |
leukocyte | 5.31e-30 | 136 |
nongranular leukocyte | 5.83e-27 | 115 |
hematopoietic oligopotent progenitor cell | 8.33e-25 | 161 |
hematopoietic multipotent progenitor cell | 8.33e-25 | 161 |
hematopoietic stem cell | 1.26e-23 | 168 |
hematopoietic cell | 3.05e-22 | 177 |
mast cell | 5.63e-15 | 5 |
basophil mast progenitor cell | 5.63e-15 | 5 |
mesenchymal cell | 3.19e-09 | 354 |
connective tissue cell | 5.76e-09 | 361 |
endocrine cell | 1.49e-08 | 9 |
motile cell | 4.61e-08 | 386 |
multi fate stem cell | 5.92e-07 | 427 |
somatic stem cell | 8.42e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.71e-56 | 76 |
bone element | 7.60e-52 | 82 |
skeletal element | 5.59e-47 | 90 |
immune system | 2.29e-45 | 93 |
hematopoietic system | 6.76e-43 | 98 |
blood island | 6.76e-43 | 98 |
skeletal system | 5.62e-42 | 100 |
hemolymphoid system | 1.24e-38 | 108 |
musculoskeletal system | 8.69e-24 | 167 |
lateral plate mesoderm | 6.25e-19 | 203 |
mesoderm | 4.41e-12 | 315 |
mesoderm-derived structure | 4.41e-12 | 315 |
presumptive mesoderm | 4.41e-12 | 315 |
connective tissue | 1.29e-08 | 371 |