FFCP PHASE1:Hg19::chr10:17255240..17255267,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:17255240..17255267,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:17255240..17255267,+ | |||
|id=chr10:17255240..17255267,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.84e-120!42;CL:0000860!1.98e-111!45;CL:0000766!5.75e-89!76;CL:0002194!1.30e-88!63;CL:0000576!1.30e-88!63;CL:0000040!1.30e-88!63;CL:0000559!1.30e-88!63;CL:0002009!1.23e-85!65;CL:0000839!6.22e-79!70;CL:0000557!1.05e-77!71;CL:0000738!3.85e-64!140;CL:0002087!3.07e-61!119;CL:0000763!2.04e-57!112;CL:0000049!2.04e-57!112;CL:0000037!1.38e-52!172;CL:0000566!1.38e-52!172;CL:0002031!2.77e-50!124;CL:0000988!3.94e-49!182;CL:0002032!7.63e-44!165;CL:0000837!7.63e-44!165;CL:0002393!2.92e-25!9;CL:0002397!2.92e-25!9;CL:0000134!9.72e-20!358;CL:0002320!3.76e-19!365;CL:0000219!4.43e-17!390;CL:0000034!1.10e-14!444;CL:0000048!1.34e-14!430;CL:0000723!3.02e-14!436;CL:0000767!8.13e-13!3;CL:0000842!7.65e-12!3;CL:0000224!5.45e-09!4;CL:0000094!3.64e-08!8;CL:0000063!5.42e-08!578;CL:0002371!1.68e-07!591;CL:0000144!4.12e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.59e-63;33!CL:0002057;4.59e-63;33!CL:0000473;6.90e-43;39!CL:0000234;6.90e-43;39!CL:0000576;1.51e-40;48!CL:0000766;5.10e-28;69!CL:0000767;1.15e-19;3!CL:0002393;1.07e-16;6!CL:0002397;1.07e-16;6!CL:0002087;5.67e-15;104!CL:0000763;2.02e-13;100!CL:0000094;9.64e-13;8!CL:0000081;2.69e-09;11!CL:0000738;6.19e-09;136!CL:0000226;6.34e-09;3!CL:0000842;6.34e-09;3!CL:0000784;9.65e-09;3!CL:0000988;8.17e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.58e-79,42;CL:0002057,4.58e-79,42;CL:0000473,1.34e-68,48;CL:0000234,1.34e-68,48;CL:0000766,2.44e-65,72;CL:0002194,1.02e-58,59;CL:0000576,1.02e-58,59;CL:0000040,1.02e-58,59;CL:0000559,1.02e-58,59;CL:0002009,1.15e-56,61;CL:0000839,4.47e-52,66;CL:0000557,3.08e-51,67;CL:0000738,4.79e-43,136;CL:0000763,4.99e-42,108;CL:0000049,4.99e-42,108;CL:0002087,6.35e-36,115;CL:0000037,7.30e-34,168;CL:0000988,7.14e-32,177;CL:0002031,4.93e-29,120;CL:0002032,1.20e-28,161;CL:0000837,1.20e-28,161;CL:0000767,1.08e-19,3;CL:0000134,3.64e-13,354;CL:0002320,8.48e-13,361;CL:0000094,8.94e-13,8;CL:0000219,1.66e-11,386;CL:0002393,3.05e-11,9;CL:0002397,3.05e-11,9;CL:0000048,6.38e-10,427;CL:0000723,1.06e-09,433;CL:0000034,2.02e-09,441;CL:0000081,2.55e-09,11;CL:0000226,6.47e-09,3;CL:0000842,6.47e-09,3;CL:0000784,9.66e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.26e-53;42!CL:0000049;4.18e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-71!80;UBERON:0001474!4.72e-66!86;UBERON:0002390!1.93e-63!102;UBERON:0003061!1.93e-63!102;UBERON:0002193!6.20e-57!112;UBERON:0004765!6.58e-55!101;UBERON:0001434!6.58e-55!101;UBERON:0002405!4.18e-47!115;UBERON:0002204!1.65e-29!167;UBERON:0003081!8.55e-25!216;UBERON:0002384!2.38e-18!375;UBERON:0000926!8.59e-07!448;UBERON:0004120!8.59e-07!448;UBERON:0006603!8.59e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-44,76;UBERON:0001474,4.27e-41,82;UBERON:0002390,8.92e-40,98;UBERON:0003061,8.92e-40,98;UBERON:0004765,4.73e-37,90;UBERON:0002405,1.03e-35,93;UBERON:0002193,1.18e-35,108;UBERON:0001434,6.79e-33,100;UBERON:0002204,8.65e-18,167;UBERON:0003081,1.28e-16,203;UBERON:0002384,2.68e-12,371;UBERON:0000926,7.70e-09,315;UBERON:0004120,7.70e-09,315;UBERON:0006603,7.70e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86728553697808,8.44424675813868,10.0630480155449,0,0,0,0,0,0.880801318004542,23.8218025668707,4.8130667392834,5.4252717678963,0,0,0,0.290796477559129,0,0.485168122375632,0.697287110717054,0,2.16794459626573,2.3015391385772,0.512321413058201,2.60130452877444,6.89491361473237,7.10033151942209,1.35426486594342,0.564727018627814,1.63743690034707,1.12361742222542,13.4676912643197,9.62787081228281,13.4260796417799,0,0.199463657621632,0.426224750532694,9.28669563611469,6.24123747160254,8.09668923694247,1.00499466102697,0.521482918420201,1.73751075764093,3.63239701580021,9.57521853567668,11.076183560431,0.211255286311942,1.91343869968539,0.628975936525128,0.336985893439485,0.300353785683013,1.12507910687956,0.855038231223746,0,0.365328307529268,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,1.90792499444274,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,3.45142721309787,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:17255240..17255267,+ | |||
}} |
Latest revision as of 12:13, 23 July 2015
Short description: | p@chr10:17255240..17255267, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17255240..17255267, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-44 | 76 |
bone element | 4.27e-41 | 82 |
hematopoietic system | 8.92e-40 | 98 |
blood island | 8.92e-40 | 98 |
skeletal element | 4.73e-37 | 90 |
immune system | 1.03e-35 | 93 |
hemolymphoid system | 1.18e-35 | 108 |
skeletal system | 6.79e-33 | 100 |
musculoskeletal system | 8.65e-18 | 167 |
lateral plate mesoderm | 1.28e-16 | 203 |
connective tissue | 2.68e-12 | 371 |
mesoderm | 7.70e-09 | 315 |
mesoderm-derived structure | 7.70e-09 | 315 |
presumptive mesoderm | 7.70e-09 | 315 |