FFCP PHASE1:Hg19::chr10:25242669..25242702,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:25242669..25242702,- | |||
|description=CAGE_peak_at_chr10:25242669..25242702,- | |||
|id=chr10:25242669..25242702,- | |||
|ontology_enrichment_celltype=CL:0000055!1.61e-15!180;CL:0000680!3.08e-13!57;CL:0000056!3.08e-13!57;CL:0000355!3.08e-13!57;CL:0000187!6.14e-12!54;CL:0000057!1.20e-11!75;CL:0002494!2.30e-11!16;CL:0000393!1.64e-10!60;CL:0000211!1.64e-10!60;CL:0002620!3.79e-10!23;CL:0000183!5.02e-10!59;CL:0000192!5.89e-10!42;CL:0000514!5.89e-10!42;CL:0000359!8.29e-09!32 | |||
|ontology_enrichment_celltype_v019=CL:0002494;1.14e-17;16!CL:0000569;1.89e-16;4!CL:0002595;1.35e-12;5!CL:0002582;8.81e-12;3!CL:0002593;5.48e-09;2!CL:0002583;4.04e-08;2!CL:0000359;5.58e-08;32!CL:0002570;1.11e-07;8!CL:0002334;2.08e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.27e-17,16;CL:0000569,1.77e-16,4;CL:0000011,1.77e-16,4;CL:0002595,1.46e-12,5;CL:0002582,5.68e-12,3;CL:0000057,8.09e-10,76;CL:0002593,6.18e-09,2;CL:0002583,1.80e-08,2;CL:0000359,4.48e-08,32;CL:0002334,1.28e-07,12;CL:0002570,1.31e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000011;1.89e-16;4!UBERON:0010122;1.45e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-20!115;UBERON:0000025!8.33e-20!194;UBERON:0000483!2.05e-17!309;UBERON:0000119!2.52e-17!312;UBERON:0004111!3.13e-17!241;UBERON:0001049!6.30e-17!57;UBERON:0005068!6.30e-17!57;UBERON:0006241!6.30e-17!57;UBERON:0007135!6.30e-17!57;UBERON:0000477!7.75e-15!286;UBERON:0004573!8.83e-15!33;UBERON:0004571!8.83e-15!33;UBERON:0000475!9.25e-15!365;UBERON:0000948!1.58e-14!24;UBERON:0005498!1.58e-14!24;UBERON:0004140!1.58e-14!24;UBERON:0009881!1.58e-14!24;UBERON:0004141!1.58e-14!24;UBERON:0003084!1.58e-14!24;UBERON:0007005!1.58e-14!24;UBERON:0004139!1.58e-14!24;UBERON:0004291!1.58e-14!24;UBERON:0002385!3.86e-14!63;UBERON:0001015!3.86e-14!63;UBERON:0000383!3.86e-14!63;UBERON:0002616!1.40e-13!59;UBERON:0007100!2.15e-13!27;UBERON:0001134!2.59e-13!61;UBERON:0002036!2.59e-13!61;UBERON:0003082!2.59e-13!61;UBERON:0004872!4.48e-13!84;UBERON:0004290!6.54e-13!70;UBERON:0003075!1.02e-12!86;UBERON:0007284!1.02e-12!86;UBERON:0000486!3.38e-12!82;UBERON:0002346!3.82e-12!90;UBERON:0002780!5.33e-12!41;UBERON:0001890!5.33e-12!41;UBERON:0006240!5.33e-12!41;UBERON:0001637!1.29e-11!42;UBERON:0003509!1.29e-11!42;UBERON:0004572!1.29e-11!42;UBERON:0000914!1.44e-11!83;UBERON:0002329!1.44e-11!83;UBERON:0003077!1.44e-11!83;UBERON:0003059!1.44e-11!83;UBERON:0007282!1.44e-11!83;UBERON:0009618!1.44e-11!83;UBERON:0007285!1.44e-11!83;UBERON:0003080!1.67e-11!42;UBERON:0000481!3.29e-11!347;UBERON:0001017!2.30e-10!82;UBERON:0000955!3.34e-10!69;UBERON:0006238!3.34e-10!69;UBERON:0005743!8.22e-10!86;UBERON:0000468!1.08e-09!659;UBERON:0000467!2.15e-09!625;UBERON:0002020!2.21e-09!34;UBERON:0003528!2.21e-09!34;UBERON:0000480!2.67e-09!626;UBERON:0000073!3.11e-09!94;UBERON:0001016!3.11e-09!94;UBERON:0001893!3.80e-09!34;UBERON:0002791!8.07e-09!33;UBERON:0001981!1.08e-08!60;UBERON:0007500!1.08e-08!60;UBERON:0004537!1.08e-08!60;UBERON:0006965!1.08e-08!60;UBERON:0003914!1.65e-08!118;UBERON:0001869!3.13e-08!32;UBERON:0004535!6.21e-08!110;UBERON:0001009!6.98e-08!113;UBERON:0002308!1.19e-07!9;UBERON:0000125!1.19e-07!9;UBERON:0003076!6.98e-07!15;UBERON:0003057!6.98e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.65e-22;22!UBERON:0007100;1.77e-19;25!UBERON:0003834;1.35e-12;5!UBERON:0001533;1.35e-12;5!UBERON:0004573;8.53e-11;33!UBERON:0004571;8.53e-11;33!UBERON:0003513;5.27e-09;7!UBERON:0002456;5.48e-09;2!UBERON:0001873;1.45e-08;2!UBERON:0001637;3.53e-07;42!UBERON:0003509;3.53e-07;42!UBERON:0004572;3.53e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.31e-20,24;UBERON:0005498,2.31e-20,24;UBERON:0004140,2.31e-20,24;UBERON:0009881,2.31e-20,24;UBERON:0004141,2.31e-20,24;UBERON:0003084,2.31e-20,24;UBERON:0007005,2.31e-20,24;UBERON:0004139,2.31e-20,24;UBERON:0004291,2.31e-20,24;UBERON:0007100,8.51e-18,27;UBERON:0004872,3.77e-15,83;UBERON:0003834,1.46e-12,5;UBERON:0001533,1.46e-12,5;UBERON:0004573,8.98e-12,33;UBERON:0004571,8.98e-12,33;UBERON:0004535,2.57e-10,109;UBERON:0001009,6.59e-10,112;UBERON:0004797,2.46e-09,7;UBERON:0003914,2.84e-09,117;UBERON:0003513,5.58e-09,7;UBERON:0002456,6.18e-09,2;UBERON:0001637,9.29e-09,42;UBERON:0003509,9.29e-09,42;UBERON:0004572,9.29e-09,42;UBERON:0000025,2.14e-08,192;UBERON:0001873,2.42e-08,2;UBERON:0010122,2.42e-08,2;UBERON:0007500,3.57e-08,59;UBERON:0001981,3.57e-08,59;UBERON:0004537,3.57e-08,59;UBERON:0006965,3.57e-08,59;UBERON:0000055,9.93e-07,68 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0,0,0.37129905888014,0,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0.132409180813219,1.72101972449288,3.54668382198357,0.560677600142307,0,0,1.24484414159907,0.269421344139376,0.653847612453835,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.421352420106746,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.453728732640084,0.538168907066586,0,0.211931901159562,1.80054657650641,1.23663035086127,0,0.930584281657949,1.68776332241266,1.65642908774038,1.00973509697646,0.552299391853796,0.80823028409406,1.06502877754984,1.30977727695932,0.67824236924195,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0,0,1.03473071292505,0,0,1.12948698808508,0,0,0,0,0,0,0,0,0.744323423456331,0.460385919864187,0,0,0.511707249066704,0,0,1.85051632563187,1.59805552781814,3.6135948646076,1.55776328755086,1.62694529843943,0,0,0,0.574072240823034,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0.460511024178389,0,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0.464845549297286,0.31481234683064,2.7881490806424,3.69640296211307,0.532306030317022,4.34966496037536,0.74129687641568,0.858749320451947,0,0,0,0,0.42793898803392,0.95460974377781,0.78494864019923,0.539617372749944,0.274537029736055,0,0.606547444719948,1.58510321173008,1.26377536871694,0,4.14312932373184,2.11300293513511,0.136499911407986,0.707027159768564,0,2.75682671773062,1.32687795048244,0.438450885253763,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0.354761064070598,2.74439925886963,0.987884678879706,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.597743964753209,0,0.251932747854276,0,0,0.622079175323615,0.179736702294654,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,3.54296554325536,1.08536794762867,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.606610196826093,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0.176512253383001,0.451961481561065,0,0,0.569797163602908,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,21.2254624966913,5.95817102430378,0.717873024576814,0.399358000997982,0,0,0.604651252380536,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0.500763722825999,1.14681839138014,0.998361463831671,0.434674820589684,0,0,0,0,0,0,0,1.04478362020812,2.10341978862502,0.554805861502613,0,0.251567901752575,0,3.66144109435078,4.83938956042365,18.9633384710992,2.66139269981341,0.159296767163702,0,0.931577741257556,14.9294234822708,0,0,0.450772826991655,0,0,0,0.214821114084977,0,0,0,1.71697852591396,3.36749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,3.68659363130579,0,0,0,0,0,0.736423801007363,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0.638535436228605,0,1.26035848110859,0,0.484426936895553,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0.887136517302272,0.135075169236789,0,0.620060389503552,0.126831620387814,0.546974809018219,0,0.992422356778588,0,0,0.535701835878287,1.00885116665647,1.21393120847326,0,0,0,0,0.271878931907327,0.263091094251396,0,0,0.39246546425257,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.655678681511872,0,0.490296643507811,0,0,1.48523200163543,0.8453114551668,0.16992711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| |||
|short_description=p@chr10:25242669..25242702,- | |||
}} |
Latest revision as of 12:46, 23 July 2015
Short description: | p@chr10:25242669..25242702, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:25242669..25242702, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.27e-17 | 16 |
cardiac mesenchymal cell | 1.77e-16 | 4 |
migratory trunk neural crest cell | 1.77e-16 | 4 |
smooth muscle cell of the subclavian artery | 1.46e-12 | 5 |
visceral preadipocyte | 5.68e-12 | 3 |
fibroblast | 8.09e-10 | 76 |
smooth muscle cell of the internal thoracic artery | 6.18e-09 | 2 |
subcutaneous preadipocyte | 1.80e-08 | 2 |
vascular associated smooth muscle cell | 4.48e-08 | 32 |
preadipocyte | 1.28e-07 | 12 |
mesenchymal stem cell of adipose | 1.31e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
heart | 2.31e-20 | 24 |
primitive heart tube | 2.31e-20 | 24 |
primary heart field | 2.31e-20 | 24 |
anterior lateral plate mesoderm | 2.31e-20 | 24 |
heart tube | 2.31e-20 | 24 |
heart primordium | 2.31e-20 | 24 |
cardiac mesoderm | 2.31e-20 | 24 |
cardiogenic plate | 2.31e-20 | 24 |
heart rudiment | 2.31e-20 | 24 |
primary circulatory organ | 8.51e-18 | 27 |
splanchnic layer of lateral plate mesoderm | 3.77e-15 | 83 |
thoracic segment blood vessel | 1.46e-12 | 5 |
subclavian artery | 1.46e-12 | 5 |
systemic artery | 8.98e-12 | 33 |
systemic arterial system | 8.98e-12 | 33 |
cardiovascular system | 2.57e-10 | 109 |
circulatory system | 6.59e-10 | 112 |
blood vessel layer | 2.46e-09 | 7 |
epithelial tube | 2.84e-09 | 117 |
trunk blood vessel | 5.58e-09 | 7 |
internal thoracic artery | 6.18e-09 | 2 |
artery | 9.29e-09 | 42 |
arterial blood vessel | 9.29e-09 | 42 |
arterial system | 9.29e-09 | 42 |
tube | 2.14e-08 | 192 |
caudate nucleus | 2.42e-08 | 2 |
future caudate nucleus | 2.42e-08 | 2 |
epithelial tube open at both ends | 3.57e-08 | 59 |
blood vessel | 3.57e-08 | 59 |
blood vasculature | 3.57e-08 | 59 |
vascular cord | 3.57e-08 | 59 |
vessel | 9.93e-07 | 68 |