FFCP PHASE1:Hg19::chr10:31987035..31987065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:31987035..31987065,+ | |||
|coexpression_cluster_id=C2988 | |coexpression_cluster_id=C2988 | ||
|description=CAGE_peak_at_chr10:31987035..31987065,+ | |description=CAGE_peak_at_chr10:31987035..31987065,+ | ||
|id=chr10:31987035..31987065,+ | |id=chr10:31987035..31987065,+ | ||
|ontology_enrichment_celltype=CL:0000071;2.33e-29;18!CL:0002139;3.31e-29;24!CL:0000115;3.54e-23;36!CL:0002078;8.72e-15;45!CL:0000767;1.44e-13;3!CL:0000226;4.38e-13;3!CL:0000842;4.38e-13;3!CL:0000213;1.19e-12;58!CL:0000215;1.19e-12;58!CL:0002144;1.55e-12;3!CL:0002543;3.37e-11;6!CL:1000413;1.00e-10;9!CL:0002544;1.02e-10;6!CL:0000094;1.53e-08;8!CL:0000097;6.11e-08;5!CL:0002393;3.73e-07;6!CL:0002397;3.73e-07;6 | |ontology_enrichment_celltype=CL:0002139!8.75e-20!24;CL:0000115!9.27e-19!35;CL:0000071!2.77e-16!18;CL:0002546!2.77e-16!18;CL:0002078!5.03e-13!44;CL:0002057!2.56e-11!42;CL:0000766!2.10e-10!76;CL:0000860!4.82e-10!45;CL:0000557!8.76e-09!71;CL:0002543!2.20e-08!6;CL:0000839!2.22e-08!70;CL:0000213!3.73e-08!57;CL:0000215!3.73e-08!57;CL:0002009!1.10e-07!65;CL:0002194!1.56e-07!63;CL:0000576!1.56e-07!63;CL:0000040!1.56e-07!63;CL:0000559!1.56e-07!63 | ||
| | |ontology_enrichment_celltype_v019=CL:0000071;2.33e-29;18!CL:0002139;3.31e-29;24!CL:0000115;3.54e-23;36!CL:0002078;8.72e-15;45!CL:0000767;1.44e-13;3!CL:0000226;4.38e-13;3!CL:0000842;4.38e-13;3!CL:0000213;1.19e-12;58!CL:0000215;1.19e-12;58!CL:0002144;1.55e-12;3!CL:0002543;3.37e-11;6!CL:1000413;1.00e-10;9!CL:0002544;1.02e-10;6!CL:0000094;1.53e-08;8!CL:0000097;6.11e-08;5!CL:0002393;3.73e-07;6!CL:0002397;3.73e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000071,7.53e-30,18;CL:0002546,7.53e-30,18;CL:0002139,1.92e-29,24;CL:0000115,6.71e-28,36;CL:0002078,1.70e-21,45;CL:0000213,9.10e-16,58;CL:0000215,9.10e-16,58;CL:0000767,1.48e-13,3;CL:0000226,4.50e-13,3;CL:0000842,4.50e-13,3;CL:0002144,1.57e-12,3;CL:0000766,4.18e-12,72;CL:0002543,1.99e-11,6;CL:0002544,4.65e-11,6;CL:1000413,6.06e-11,9;CL:0000094,1.69e-08,8;CL:0000097,4.72e-08,5;CL:0002028,4.72e-08,5;CL:0000839,2.02e-07,66;CL:0000557,2.84e-07,67;CL:0000738,3.77e-07,136;CL:0000763,7.48e-07,108;CL:0000049,7.48e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002546;2.33e-29;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;2.33e-29;18!UBERON:0001986;2.33e-29;18!UBERON:0004852;2.33e-29;18!UBERON:0000487;1.53e-23;22!UBERON:0006914;2.12e-20;25!UBERON:0000490;6.36e-14;33!UBERON:0010523;1.55e-12;3!UBERON:0001915;1.55e-12;3!UBERON:0001982;1.55e-12;3!UBERON:0003915;1.00e-10;9!UBERON:0004700;1.00e-10;9!UBERON:0001917;1.00e-10;9!UBERON:0001638;1.79e-07;9!UBERON:0003920;1.79e-07;9!UBERON:0004582;1.79e-07;9!UBERON:0007500;3.12e-07;56!UBERON:0001981;3.12e-07;56!UBERON:0004537;3.12e-07;56 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.77e-16!18;UBERON:0004638!2.77e-16!18;UBERON:0004852!2.77e-16!18;UBERON:0000487!2.79e-12!22;UBERON:0003081!1.99e-11!216;UBERON:0000055!3.39e-10!69;UBERON:0006914!3.75e-10!25;UBERON:0002371!1.05e-08!80;UBERON:0001981!1.83e-08!60;UBERON:0007500!1.83e-08!60;UBERON:0004537!1.83e-08!60;UBERON:0006965!1.83e-08!60;UBERON:0002193!2.17e-08!112;UBERON:0002049!2.73e-08!79;UBERON:0007798!2.73e-08!79;UBERON:0004535!7.56e-08!110;UBERON:0000025!1.03e-07!194;UBERON:0001474!1.98e-07!86;UBERON:0000467!2.11e-07!625;UBERON:0001009!2.42e-07!113;UBERON:0000480!2.51e-07!626;UBERON:0004872!2.67e-07!84;UBERON:0002405!3.56e-07!115;UBERON:0002390!4.52e-07!102;UBERON:0003061!4.52e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.33e-29;18!UBERON:0001986;2.33e-29;18!UBERON:0004852;2.33e-29;18!UBERON:0000487;1.53e-23;22!UBERON:0006914;2.12e-20;25!UBERON:0000490;6.36e-14;33!UBERON:0010523;1.55e-12;3!UBERON:0001915;1.55e-12;3!UBERON:0001982;1.55e-12;3!UBERON:0003915;1.00e-10;9!UBERON:0004700;1.00e-10;9!UBERON:0001917;1.00e-10;9!UBERON:0001638;1.79e-07;9!UBERON:0003920;1.79e-07;9!UBERON:0004582;1.79e-07;9!UBERON:0007500;3.12e-07;56!UBERON:0001981;3.12e-07;56!UBERON:0004537;3.12e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.53e-30,18;UBERON:0001986,7.53e-30,18;UBERON:0004852,7.53e-30,18;UBERON:0000487,6.16e-24,22;UBERON:0006914,9.58e-21,25;UBERON:0003081,1.16e-12,203;UBERON:0010523,1.57e-12,3;UBERON:0001915,1.57e-12,3;UBERON:0001982,1.57e-12,3;UBERON:0003915,6.06e-11,9;UBERON:0004700,6.06e-11,9;UBERON:0001917,6.06e-11,9;UBERON:0000055,8.39e-10,68;UBERON:0000926,5.69e-09,315;UBERON:0004120,5.69e-09,315;UBERON:0006603,5.69e-09,315;UBERON:0007500,9.26e-09,59;UBERON:0001981,9.26e-09,59;UBERON:0004537,9.26e-09,59;UBERON:0006965,9.26e-09,59;UBERON:0004535,1.03e-08,109;UBERON:0001009,2.29e-08,112;UBERON:0002049,3.95e-08,78;UBERON:0007798,3.95e-08,78;UBERON:0002193,9.93e-08,108;UBERON:0001638,1.27e-07,9;UBERON:0003920,1.27e-07,9;UBERON:0004582,1.27e-07,9;UBERON:0002390,7.61e-07,98;UBERON:0003061,7.61e-07,98 | |||
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| ||
|short_description=p@chr10:31987035..31987065,+ | |short_description=p@chr10:31987035..31987065,+ | ||
}} | }} |
Latest revision as of 13:14, 23 July 2015
Short description: | p@chr10:31987035..31987065, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:31987035..31987065, + |
Coexpression cluster: | C2988_CD14_Endothelial_Peripheral_Basophils_Hepatic_Skeletal_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 7.53e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.53e-30 | 18 |
endothelial cell of vascular tree | 1.92e-29 | 24 |
endothelial cell | 6.71e-28 | 36 |
meso-epithelial cell | 1.70e-21 | 45 |
lining cell | 9.10e-16 | 58 |
barrier cell | 9.10e-16 | 58 |
basophil | 1.48e-13 | 3 |
single nucleate cell | 4.50e-13 | 3 |
mononuclear cell | 4.50e-13 | 3 |
capillary endothelial cell | 1.57e-12 | 3 |
myeloid leukocyte | 4.18e-12 | 72 |
vein endothelial cell | 1.99e-11 | 6 |
aortic endothelial cell | 4.65e-11 | 6 |
endothelial cell of artery | 6.06e-11 | 9 |
granulocyte | 1.69e-08 | 8 |
mast cell | 4.72e-08 | 5 |
basophil mast progenitor cell | 4.72e-08 | 5 |
myeloid lineage restricted progenitor cell | 2.02e-07 | 66 |
granulocyte monocyte progenitor cell | 2.84e-07 | 67 |
leukocyte | 3.77e-07 | 136 |
myeloid cell | 7.48e-07 | 108 |
common myeloid progenitor | 7.48e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 7.53e-30 | 18 |
endothelium | 7.53e-30 | 18 |
cardiovascular system endothelium | 7.53e-30 | 18 |
simple squamous epithelium | 6.16e-24 | 22 |
squamous epithelium | 9.58e-21 | 25 |
lateral plate mesoderm | 1.16e-12 | 203 |
microcirculatory vessel | 1.57e-12 | 3 |
endothelium of capillary | 1.57e-12 | 3 |
capillary | 1.57e-12 | 3 |
endothelial tube | 6.06e-11 | 9 |
arterial system endothelium | 6.06e-11 | 9 |
endothelium of artery | 6.06e-11 | 9 |
vessel | 8.39e-10 | 68 |
mesoderm | 5.69e-09 | 315 |
mesoderm-derived structure | 5.69e-09 | 315 |
presumptive mesoderm | 5.69e-09 | 315 |
epithelial tube open at both ends | 9.26e-09 | 59 |
blood vessel | 9.26e-09 | 59 |
blood vasculature | 9.26e-09 | 59 |
vascular cord | 9.26e-09 | 59 |
cardiovascular system | 1.03e-08 | 109 |
circulatory system | 2.29e-08 | 112 |
vasculature | 3.95e-08 | 78 |
vascular system | 3.95e-08 | 78 |
hemolymphoid system | 9.93e-08 | 108 |
vein | 1.27e-07 | 9 |
venous blood vessel | 1.27e-07 | 9 |
venous system | 1.27e-07 | 9 |
hematopoietic system | 7.61e-07 | 98 |
blood island | 7.61e-07 | 98 |