FFCP PHASE1:Hg19::chr10:91088155..91088171,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:91088155..91088171,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:91088155..91088171,+ | |description=CAGE_peak_at_chr10:91088155..91088171,+ | ||
|id=chr10:91088155..91088171,+ | |id=chr10:91088155..91088171,+ | ||
|ontology_enrichment_celltype=CL:0000860!6.18e-26!45;CL:0002057!9.28e-23!42;CL:0000766!3.46e-22!76;CL:0002194!4.81e-17!63;CL:0000576!4.81e-17!63;CL:0000040!4.81e-17!63;CL:0000559!4.81e-17!63;CL:0002009!2.95e-16!65;CL:0000839!9.99e-16!70;CL:0000557!2.21e-15!71;CL:0000763!2.29e-13!112;CL:0000049!2.29e-13!112;CL:0000738!8.87e-09!140;CL:0000094!1.36e-08!8;CL:0000081!7.28e-08!11;CL:0000775!3.97e-07!3;CL:0002032!4.77e-07!165;CL:0000837!4.77e-07!165;CL:0000037!6.55e-07!172;CL:0000566!6.55e-07!172 | |ontology_enrichment_celltype=CL:0000860!6.18e-26!45;CL:0002057!9.28e-23!42;CL:0000766!3.46e-22!76;CL:0002194!4.81e-17!63;CL:0000576!4.81e-17!63;CL:0000040!4.81e-17!63;CL:0000559!4.81e-17!63;CL:0002009!2.95e-16!65;CL:0000839!9.99e-16!70;CL:0000557!2.21e-15!71;CL:0000763!2.29e-13!112;CL:0000049!2.29e-13!112;CL:0000738!8.87e-09!140;CL:0000094!1.36e-08!8;CL:0000081!7.28e-08!11;CL:0000775!3.97e-07!3;CL:0002032!4.77e-07!165;CL:0000837!4.77e-07!165;CL:0000037!6.55e-07!172;CL:0000566!6.55e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.12e-64;33!CL:0002057;1.12e-64;33!CL:0000473;2.76e-48;39!CL:0000234;2.76e-48;39!CL:0000576;4.21e-30;48!CL:0000766;2.60e-23;69!CL:0000775;5.58e-22;3!CL:0000763;9.29e-16;100!CL:0000094;3.00e-14;8!CL:0000081;2.09e-10;11!CL:0002087;1.29e-09;104!CL:0002601;4.89e-08;1!CL:0000738;4.58e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.42e-56,42;CL:0002057,2.42e-56,42;CL:0000473,3.30e-54,48;CL:0000234,3.30e-54,48;CL:0000766,1.08e-50,72;CL:0002194,1.29e-42,59;CL:0000576,1.29e-42,59;CL:0000040,1.29e-42,59;CL:0000559,1.29e-42,59;CL:0002009,4.06e-41,61;CL:0000839,9.12e-38,66;CL:0000557,3.72e-37,67;CL:0000763,1.54e-32,108;CL:0000049,1.54e-32,108;CL:0000738,5.33e-25,136;CL:0000775,5.79e-22,3;CL:0002032,1.83e-20,161;CL:0000837,1.83e-20,161;CL:0002087,3.43e-20,115;CL:0000037,1.96e-19,168;CL:0002031,3.39e-19,120;CL:0000988,3.16e-18,177;CL:0000094,3.00e-14,8;CL:0000081,2.10e-10,11;CL:0002601,4.41e-08,1;CL:0000134,1.00e-07,354;CL:0002320,1.74e-07,361;CL:0000048,3.83e-07,427;CL:0000723,5.64e-07,433;CL:0000034,9.30e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-38;42!CL:0000049;2.79e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.29e-19!112;UBERON:0002390!9.63e-18!102;UBERON:0003061!9.63e-18!102;UBERON:0002371!6.36e-15!80;UBERON:0002405!5.38e-14!115;UBERON:0001474!3.05e-13!86;UBERON:0004765!9.09e-11!101;UBERON:0001434!9.09e-11!101 | |ontology_enrichment_uberon=UBERON:0002193!2.29e-19!112;UBERON:0002390!9.63e-18!102;UBERON:0003061!9.63e-18!102;UBERON:0002371!6.36e-15!80;UBERON:0002405!5.38e-14!115;UBERON:0001474!3.05e-13!86;UBERON:0004765!9.09e-11!101;UBERON:0001434!9.09e-11!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.29e-32,76;UBERON:0002390,8.82e-30,98;UBERON:0003061,8.82e-30,98;UBERON:0001474,9.45e-30,82;UBERON:0004765,8.47e-27,90;UBERON:0002193,1.14e-26,108;UBERON:0002405,8.06e-26,93;UBERON:0001434,9.18e-24,100;UBERON:0002204,6.71e-16,167;UBERON:0003081,3.64e-15,203;UBERON:0000926,3.68e-09,315;UBERON:0004120,3.68e-09,315;UBERON:0006603,3.68e-09,315;UBERON:0002384,3.71e-07,371 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,1.43846196161075,1.0246428261164,8.27687804610048,2.75796544589295,0,0,0,0,0.224723484445085,13.7737751566906,6.41858054152187,7.67204550958849,2.63881040149373,1.79517291859469,4.26224750532694,24.3775760448011,3.97169657283798,6.22822248995575,1.25624332628372,1.5644487552606,6.5156653411535,23.005181100068,18.7821594353658,46.51997095381,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.794455084879313,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,9.73709131131337,5.9832291840805,7.45947924184864,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,1.84820148105653,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.952927101831156,0,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.97894681802587,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0.607719912354764,0.138258436151731,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,1.43846196161075,1.0246428261164,8.27687804610048,2.75796544589295,0,0,0,0,0.224723484445085,13.7737751566906,6.41858054152187,7.67204550958849,2.63881040149373,1.79517291859469,4.26224750532694,24.3775760448011,3.97169657283798,6.22822248995575,1.25624332628372,1.5644487552606,6.5156653411535,23.005181100068,18.7821594353658,46.51997095381,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.794455084879313,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,9.73709131131337,5.9832291840805,7.45947924184864,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,1.84820148105653,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.952927101831156,0,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.97894681802587,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0.607719912354764,0.138258436151731,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:91088155..91088171,+ | |short_description=p@chr10:91088155..91088171,+ | ||
}} | }} |
Latest revision as of 16:37, 23 July 2015
Short description: | p@chr10:91088155..91088171, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:91088155..91088171, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.42e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-56 | 42 |
defensive cell | 3.30e-54 | 48 |
phagocyte | 3.30e-54 | 48 |
myeloid leukocyte | 1.08e-50 | 72 |
monopoietic cell | 1.29e-42 | 59 |
monocyte | 1.29e-42 | 59 |
monoblast | 1.29e-42 | 59 |
promonocyte | 1.29e-42 | 59 |
macrophage dendritic cell progenitor | 4.06e-41 | 61 |
myeloid lineage restricted progenitor cell | 9.12e-38 | 66 |
granulocyte monocyte progenitor cell | 3.72e-37 | 67 |
myeloid cell | 1.54e-32 | 108 |
common myeloid progenitor | 1.54e-32 | 108 |
leukocyte | 5.33e-25 | 136 |
neutrophil | 5.79e-22 | 3 |
hematopoietic oligopotent progenitor cell | 1.83e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-20 | 161 |
nongranular leukocyte | 3.43e-20 | 115 |
hematopoietic stem cell | 1.96e-19 | 168 |
hematopoietic lineage restricted progenitor cell | 3.39e-19 | 120 |
hematopoietic cell | 3.16e-18 | 177 |
granulocyte | 3.00e-14 | 8 |
blood cell | 2.10e-10 | 11 |
uterine smooth muscle cell | 4.41e-08 | 1 |
mesenchymal cell | 1.00e-07 | 354 |
connective tissue cell | 1.74e-07 | 361 |
multi fate stem cell | 3.83e-07 | 427 |
somatic stem cell | 5.64e-07 | 433 |
stem cell | 9.30e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.29e-32 | 76 |
hematopoietic system | 8.82e-30 | 98 |
blood island | 8.82e-30 | 98 |
bone element | 9.45e-30 | 82 |
skeletal element | 8.47e-27 | 90 |
hemolymphoid system | 1.14e-26 | 108 |
immune system | 8.06e-26 | 93 |
skeletal system | 9.18e-24 | 100 |
musculoskeletal system | 6.71e-16 | 167 |
lateral plate mesoderm | 3.64e-15 | 203 |
mesoderm | 3.68e-09 | 315 |
mesoderm-derived structure | 3.68e-09 | 315 |
presumptive mesoderm | 3.68e-09 | 315 |
connective tissue | 3.71e-07 | 371 |