FFCP PHASE1:Hg19::chr11:102665915..102665927,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102665915..102665927,+ | |||
|coexpression_cluster_id=C422 | |coexpression_cluster_id=C422 | ||
|description=CAGE_peak_at_chr11:102665915..102665927,+ | |description=CAGE_peak_at_chr11:102665915..102665927,+ | ||
|id=chr11:102665915..102665927,+ | |id=chr11:102665915..102665927,+ | ||
|ontology_enrichment_celltype=CL:0000359!4.64e-22!32;CL:0000192!5.21e-16!42;CL:0000514!5.21e-16!42;CL:0002551!8.56e-16!6;CL:0002494!8.69e-12!16;CL:0000187!1.00e-11!54;CL:0000055!3.38e-11!180;CL:0000680!6.11e-11!57;CL:0000056!6.11e-11!57;CL:0000355!6.11e-11!57;CL:0000183!1.84e-10!59;CL:0000393!3.11e-10!60;CL:0000211!3.11e-10!60;CL:0002539!3.66e-10!10;CL:0000569!5.26e-10!4;CL:0000011!5.26e-10!4;CL:0002595!2.81e-08!5;CL:0000057!5.69e-08!75;CL:0000222!8.20e-08!119;CL:0002620!3.09e-07!23 | |ontology_enrichment_celltype=CL:0000359!4.64e-22!32;CL:0000192!5.21e-16!42;CL:0000514!5.21e-16!42;CL:0002551!8.56e-16!6;CL:0002494!8.69e-12!16;CL:0000187!1.00e-11!54;CL:0000055!3.38e-11!180;CL:0000680!6.11e-11!57;CL:0000056!6.11e-11!57;CL:0000355!6.11e-11!57;CL:0000183!1.84e-10!59;CL:0000393!3.11e-10!60;CL:0000211!3.11e-10!60;CL:0002539!3.66e-10!10;CL:0000569!5.26e-10!4;CL:0000011!5.26e-10!4;CL:0002595!2.81e-08!5;CL:0000057!5.69e-08!75;CL:0000222!8.20e-08!119;CL:0002620!3.09e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002592;1.07e-33;3!CL:0000511;6.72e-26;1!CL:0002625;6.72e-26;1!CL:0000216;6.72e-26;1!CL:0000569;8.13e-26;4!CL:0002494;3.70e-25;16!CL:0002595;7.73e-21;5!CL:0000359;2.12e-19;32!CL:0002593;7.30e-14;2!CL:0000192;7.17e-11;43!CL:0000187;1.24e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.08e-33,3;CL:0000511,3.58e-26,1;CL:0002625,3.58e-26,1;CL:0000216,3.58e-26,1;CL:0000569,1.11e-25,4;CL:0000011,1.11e-25,4;CL:0002494,4.32e-25,16;CL:0002595,8.13e-21,5;CL:0000359,1.48e-19,32;CL:0000192,1.22e-14,43;CL:0000514,1.22e-14,43;CL:0002593,7.30e-14,2;CL:0000187,1.67e-11,55;CL:0000680,6.38e-11,58;CL:0000056,6.38e-11,58;CL:0000355,6.38e-11,58;CL:0000393,2.14e-10,61;CL:0000211,2.14e-10,61;CL:0000222,1.86e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000011;8.13e-26;4!CL:0000514;7.17e-11;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr11:102665915..102665927,+ | |short_description=p@chr11:102665915..102665927,+ | ||
}} | }} |
Latest revision as of 17:30, 23 July 2015
Short description: | p@chr11:102665915..102665927, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102665915..102665927, + |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.08e-33 | 3 |
androgen binding protein secreting cell | 3.58e-26 | 1 |
seminiferous tubule epithelial cell | 3.58e-26 | 1 |
Sertoli cell | 3.58e-26 | 1 |
cardiac mesenchymal cell | 1.11e-25 | 4 |
migratory trunk neural crest cell | 1.11e-25 | 4 |
cardiocyte | 4.32e-25 | 16 |
smooth muscle cell of the subclavian artery | 8.13e-21 | 5 |
vascular associated smooth muscle cell | 1.48e-19 | 32 |
smooth muscle cell | 1.22e-14 | 43 |
smooth muscle myoblast | 1.22e-14 | 43 |
smooth muscle cell of the internal thoracic artery | 7.30e-14 | 2 |
muscle cell | 1.67e-11 | 55 |
muscle precursor cell | 6.38e-11 | 58 |
myoblast | 6.38e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.38e-11 | 58 |
electrically responsive cell | 2.14e-10 | 61 |
electrically active cell | 2.14e-10 | 61 |
mesodermal cell | 1.86e-07 | 121 |