FFCP PHASE1:Hg19::chr11:114166473..114166500,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=4837 | |EntrezGene=entrezgene:4837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7861 | |HGNC=HGNC:7861 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=P40261,Q6FH49 | |UniProt=uniprot:P40261,uniprot:Q6FH49 | ||
|association_with_transcript=-34bp_to_NM_006169,uc001pos.1_5end | |association_with_transcript=-34bp_to_NM_006169,uc001pos.1_5end | ||
|cluster_id=chr11:114166473..114166500,+ | |||
|description=CAGE_peak_6_at_NNMT_5end | |description=CAGE_peak_6_at_NNMT_5end | ||
|id=chr11:114166473..114166500,+ | |id=chr11:114166473..114166500,+ | ||
Revision as of 18:22, 23 July 2015
| Short description: | p6@NNMT |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_NNMT_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -34bp_to_NM_006169, uc001pos.1_5end |
| EntrezGene: | 4837 |
| HGNC: | 7861 |
| UniProt: | P40261Q6FH49 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@NNMT |
|---|
0
5
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| preadipocyte | 1.27e-11 | 12 |
| extracellular matrix secreting cell | 2.08e-10 | 15 |
| mesothelial cell | 1.18e-08 | 19 |
| GAG secreting cell | 2.28e-08 | 9 |
| carbohydrate secreting cell | 2.28e-08 | 9 |
| omentum preadipocyte | 2.28e-08 | 3 |
| preadipocyte of the breast | 8.27e-08 | 3 |
| stromal cell | 1.79e-07 | 28 |
| hepatic stellate cell | 2.50e-07 | 3 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| larynx | 7.98e-19 | 9 |
| upper respiratory tract | 6.16e-08 | 19 |
| cavity lining | 6.08e-07 | 12 |
| serous membrane | 6.08e-07 | 12 |
| omentum | 6.30e-07 | 6 |
| peritoneum | 6.30e-07 | 6 |
| abdominal cavity | 6.30e-07 | 6 |
| visceral peritoneum | 6.30e-07 | 6 |
Showing 1 to 8 of 8 entries
