FFCP PHASE1:Hg19::chr11:126010526..126010554,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:126010526..126010554,- | |||
|description=CAGE_peak_at_chr11:126010526..126010554,- | |description=CAGE_peak_at_chr11:126010526..126010554,- | ||
|id=chr11:126010526..126010554,- | |id=chr11:126010526..126010554,- | ||
|ontology_enrichment_celltype=CL:0002574!5.84e-07!1 | |ontology_enrichment_celltype=CL:0002574!5.84e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.78e-15;2!CL:0000333;6.39e-07;5 | |ontology_enrichment_celltype_v019=CL:0000047;1.78e-15;2!CL:0000333;6.39e-07;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.16e-29;1!UBERON:0007123;9.61e-24;5!UBERON:0003056;1.09e-10;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.16e-29;1!UBERON:0007123;9.61e-24;5!UBERON:0003056;1.09e-10;3 | ||
|ontology_enrichment_disease=DOID:171!8.44e-10!10 | |ontology_enrichment_disease=DOID:171!8.44e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:3193;2.37e-15;2!DOID:962;2.37e-15;2!DOID:1192;1.09e-10;3 | |ontology_enrichment_disease_v019=DOID:3193;2.37e-15;2!DOID:962;2.37e-15;2!DOID:1192;1.09e-10;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3193,2.74e-15,2;DOID:962,2.74e-15,2;DOID:1192,1.20e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0003714!1.77e-13!2;UBERON:0000341!2.71e-13!2;UBERON:0000941!1.36e-07!1;UBERON:0004904!1.36e-07!1;UBERON:0002464!1.36e-07!1;UBERON:0001021!1.36e-07!1;UBERON:0001785!1.36e-07!1;UBERON:0006834!1.63e-07!1;UBERON:0002146!2.09e-07!1;UBERON:0005623!2.09e-07!1;UBERON:0001301!2.67e-07!1;UBERON:0001882!6.97e-07!1;UBERON:0005403!6.97e-07!1 | |ontology_enrichment_uberon=UBERON:0003714!1.77e-13!2;UBERON:0000341!2.71e-13!2;UBERON:0000941!1.36e-07!1;UBERON:0004904!1.36e-07!1;UBERON:0002464!1.36e-07!1;UBERON:0001021!1.36e-07!1;UBERON:0001785!1.36e-07!1;UBERON:0006834!1.63e-07!1;UBERON:0002146!2.09e-07!1;UBERON:0005623!2.09e-07!1;UBERON:0001301!2.67e-07!1;UBERON:0001882!6.97e-07!1;UBERON:0005403!6.97e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;1.50e-56;2!UBERON:0000941;3.16e-29;1!UBERON:0001785;3.16e-29;1!UBERON:0002464;3.16e-29;1!UBERON:0004904;3.16e-29;1!UBERON:0001021;3.16e-29;1!UBERON:0002046;9.61e-24;5!UBERON:0000341;2.37e-15;2!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2!UBERON:0000010;1.80e-13;8!UBERON:0000013;6.39e-07;5!UBERON:0002410;6.39e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0003714;1.50e-56;2!UBERON:0000941;3.16e-29;1!UBERON:0001785;3.16e-29;1!UBERON:0002464;3.16e-29;1!UBERON:0004904;3.16e-29;1!UBERON:0001021;3.16e-29;1!UBERON:0002046;9.61e-24;5!UBERON:0000341;2.37e-15;2!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2!UBERON:0000010;1.80e-13;8!UBERON:0000013;6.39e-07;5!UBERON:0002410;6.39e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.00e-56,2;UBERON:0000941,3.16e-29,1;UBERON:0001785,3.16e-29,1;UBERON:0002464,3.16e-29,1;UBERON:0004904,3.16e-29,1;UBERON:0001021,3.16e-29,1;UBERON:0003902,3.16e-29,1;UBERON:0005425,3.16e-29,1;UBERON:0002046,1.02e-23,5;UBERON:0004117,1.02e-23,5;UBERON:0007689,1.02e-23,5;UBERON:0007123,1.02e-23,5;UBERON:0003091,1.02e-23,5;UBERON:0000341,2.05e-15,2;UBERON:0005162,2.37e-15,2;UBERON:0000122,2.37e-15,2;UBERON:0000010,1.91e-13,8;UBERON:0009722,2.30e-11,11;UBERON:0007690,2.30e-11,11;UBERON:0001781,2.43e-08,4;UBERON:0008814,2.60e-07,18;UBERON:0000013,6.77e-07,5;UBERON:0002410,6.77e-07,5 | |||
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|short_description=p@chr11:126010526..126010554,- | |short_description=p@chr11:126010526..126010554,- | ||
}} | }} |
Latest revision as of 19:43, 23 July 2015
Short description: | p@chr11:126010526..126010554, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:126010526..126010554, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.00e-56 | 2 |
cranial nerve II | 3.16e-29 | 1 |
cranial nerve | 3.16e-29 | 1 |
nerve trunk | 3.16e-29 | 1 |
nerve connecting eye with brain | 3.16e-29 | 1 |
nerve | 3.16e-29 | 1 |
retinal neural layer | 3.16e-29 | 1 |
presumptive neural retina | 3.16e-29 | 1 |
thyroid gland | 1.02e-23 | 5 |
pharyngeal pouch | 1.02e-23 | 5 |
thyroid diverticulum | 1.02e-23 | 5 |
pharyngeal pouch 2 | 1.02e-23 | 5 |
thyroid primordium | 1.02e-23 | 5 |
throat | 2.05e-15 | 2 |
multi cell component structure | 2.37e-15 | 2 |
neuron projection bundle | 2.37e-15 | 2 |
peripheral nervous system | 1.91e-13 | 8 |
entire pharyngeal arch endoderm | 2.30e-11 | 11 |
early pharyngeal endoderm | 2.30e-11 | 11 |
layer of retina | 2.43e-08 | 4 |
pharyngeal arch system | 2.60e-07 | 18 |
sympathetic nervous system | 6.77e-07 | 5 |
autonomic nervous system | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.74e-15 | 2 |
neurofibroma | 2.74e-15 | 2 |
peripheral nervous system neoplasm | 1.20e-10 | 3 |