FFCP PHASE1:Hg19::chr11:13994430..13994436,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:13994430..13994436,+ | |||
|coexpression_cluster_id=C228 | |coexpression_cluster_id=C228 | ||
|description=CAGE_peak_at_chr11:13994430..13994436,+ | |description=CAGE_peak_at_chr11:13994430..13994436,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.73e-07!5;CL:0000080!7.30e-07!6 | |ontology_enrichment_celltype=CL:0002322!1.73e-07!5;CL:0000080!7.30e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002253;3.11e-21;2!CL:0002563;2.53e-11;4 | |ontology_enrichment_celltype_v019=CL:0002253;3.11e-21;2!CL:0002563;2.53e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.11e-21,2;CL:0002563,2.53e-11,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!8.65e-12!235;DOID:14566!2.23e-11!239;DOID:0050687!1.35e-08!143;DOID:305!1.53e-08!106 | |ontology_enrichment_disease=DOID:162!8.65e-12!235;DOID:14566!2.23e-11!239;DOID:0050687!1.35e-08!143;DOID:305!1.53e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003343!4.60e-09!4;UBERON:0004785!4.60e-09!4;UBERON:0000344!6.78e-08!12;UBERON:0003729!2.47e-07!5 | |ontology_enrichment_uberon=UBERON:0003343!4.60e-09!4;UBERON:0004785!4.60e-09!4;UBERON:0000344!6.78e-08!12;UBERON:0003729!2.47e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.13e-17;10!UBERON:0000178;1.42e-11;15!UBERON:0000179;1.42e-11;15!UBERON:0000463;1.42e-11;15!UBERON:0001052;2.53e-11;4!UBERON:0001242;2.53e-11;4!UBERON:0001262;2.53e-11;4!UBERON:0004786;2.53e-11;4!UBERON:0004808;2.53e-11;4!UBERON:0001277;2.53e-11;4!UBERON:0004907;2.53e-09;5!UBERON:0000478;1.31e-07;24!UBERON:0000485;5.08e-07;7!UBERON:0003929;5.08e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002331;8.13e-17;10!UBERON:0000178;1.42e-11;15!UBERON:0000179;1.42e-11;15!UBERON:0000463;1.42e-11;15!UBERON:0001052;2.53e-11;4!UBERON:0001242;2.53e-11;4!UBERON:0001262;2.53e-11;4!UBERON:0004786;2.53e-11;4!UBERON:0004808;2.53e-11;4!UBERON:0001277;2.53e-11;4!UBERON:0004907;2.53e-09;5!UBERON:0000478;1.31e-07;24!UBERON:0000485;5.08e-07;7!UBERON:0003929;5.08e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.13e-17,10;UBERON:0000358,8.13e-17,10;UBERON:0000307,8.13e-17,10;UBERON:0000091,8.13e-17,10;UBERON:0000087,8.13e-17,10;UBERON:0007010,8.13e-17,10;UBERON:0007806,8.13e-17,10;UBERON:0008780,8.13e-17,10;UBERON:0005728,8.13e-17,10;UBERON:0000178,1.42e-11,15;UBERON:0000179,1.42e-11,15;UBERON:0000463,1.42e-11,15;UBERON:0001052,2.53e-11,4;UBERON:0001242,2.53e-11,4;UBERON:0001262,2.53e-11,4;UBERON:0004786,2.53e-11,4;UBERON:0004808,2.53e-11,4;UBERON:0001277,2.53e-11,4;UBERON:0004907,2.53e-09,5;UBERON:0000478,1.31e-07,24 | |||
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| ||
|short_description=p@chr11:13994430..13994436,+ | |short_description=p@chr11:13994430..13994436,+ | ||
}} | }} |
Latest revision as of 20:15, 23 July 2015
Short description: | p@chr11:13994430..13994436, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:13994430..13994436, + |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.11e-21 | 2 |
intestinal epithelial cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.13e-17 | 10 |
blastocyst | 8.13e-17 | 10 |
blastula | 8.13e-17 | 10 |
bilaminar disc | 8.13e-17 | 10 |
inner cell mass | 8.13e-17 | 10 |
cleaving embryo | 8.13e-17 | 10 |
connecting stalk | 8.13e-17 | 10 |
inner cell mass derived epiblast | 8.13e-17 | 10 |
extraembryonic mesoderm | 8.13e-17 | 10 |
blood | 1.42e-11 | 15 |
haemolymphatic fluid | 1.42e-11 | 15 |
organism substance | 1.42e-11 | 15 |
rectum | 2.53e-11 | 4 |
intestinal mucosa | 2.53e-11 | 4 |
wall of intestine | 2.53e-11 | 4 |
gastrointestinal system mucosa | 2.53e-11 | 4 |
gastrointestinal system epithelium | 2.53e-11 | 4 |
intestinal epithelium | 2.53e-11 | 4 |
lower digestive tract | 2.53e-09 | 5 |
extraembryonic structure | 1.31e-07 | 24 |