FFCP PHASE1:Hg19::chr11:62310937..62310946,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62310937..62310946,+ to FFCP PHASE1:Hg19::chr11:62310937..62310946,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:62310937..62310946,+ | |||
|coexpression_cluster_id=C489 | |||
|description=CAGE_peak_at_chr11:62310937..62310946,+ | |||
|id=chr11:62310937..62310946,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.45e-45!42;CL:0000860!4.45e-42!45;CL:0000738!7.84e-40!140;CL:0002031!4.55e-37!124;CL:0000557!4.15e-36!71;CL:0000766!7.84e-36!76;CL:0002032!3.33e-32!165;CL:0000837!3.33e-32!165;CL:0002009!8.45e-32!65;CL:0000839!3.08e-31!70;CL:0000037!1.83e-30!172;CL:0000566!1.83e-30!172;CL:0002087!1.54e-28!119;CL:0000988!3.29e-28!182;CL:0002194!1.35e-27!63;CL:0000576!1.35e-27!63;CL:0000040!1.35e-27!63;CL:0000559!1.35e-27!63;CL:0000763!2.52e-27!112;CL:0000049!2.52e-27!112;CL:0000134!6.11e-13!358;CL:0002320!1.78e-12!365;CL:0000767!7.89e-12!3;CL:0000219!7.74e-11!390;CL:0000623!1.06e-10!3;CL:0000825!1.06e-10!3;CL:0000624!1.45e-09!6;CL:0000048!6.92e-09!430;CL:0000791!1.04e-08!18;CL:0000789!1.04e-08!18;CL:0002420!1.04e-08!18;CL:0002419!1.04e-08!18;CL:0000790!1.04e-08!18;CL:0000723!1.31e-08!436;CL:0001014!1.33e-08!2;CL:0001016!1.33e-08!2;CL:0000034!2.97e-08!444;CL:0000084!1.29e-07!25;CL:0000827!1.29e-07!25;CL:0000453!5.05e-07!5;CL:0000063!8.87e-07!578;CL:0002274!9.81e-07!5;CL:0000457!9.81e-07!5;CL:0002191!9.81e-07!5;CL:0000097!9.81e-07!5;CL:0000831!9.81e-07!5;CL:0002028!9.81e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.87e-20;2!CL:0001016;2.87e-20;2!CL:0000860;4.02e-16;33!CL:0002057;4.02e-16;33!CL:0002393;2.34e-15;6!CL:0002397;2.34e-15;6!CL:0000767;7.65e-14;3!CL:0000576;5.41e-13;48!CL:0000473;2.95e-11;39!CL:0000234;2.95e-11;39!CL:0000766;2.35e-10;69!CL:0000453;1.15e-08;5!CL:0000840;2.33e-07;5!CL:0000738;4.15e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.40e-25,42;CL:0002057,1.40e-25,42;CL:0000557,3.89e-25,67;CL:0000738,6.14e-25,136;CL:0002009,7.94e-24,61;CL:0000766,2.74e-23,72;CL:0002031,1.17e-22,120;CL:0000473,3.50e-22,48;CL:0000234,3.50e-22,48;CL:0002032,1.17e-20,161;CL:0000837,1.17e-20,161;CL:0001014,1.86e-20,2;CL:0001016,1.86e-20,2;CL:0000763,6.99e-20,108;CL:0000049,6.99e-20,108;CL:0000037,1.10e-19,168;CL:0000988,1.51e-18,177;CL:0000839,1.82e-18,66;CL:0002194,2.03e-17,59;CL:0000576,2.03e-17,59;CL:0000040,2.03e-17,59;CL:0000559,2.03e-17,59;CL:0002087,6.24e-16,115;CL:0000767,4.72e-14,3;CL:0002393,2.09e-10,9;CL:0002397,2.09e-10,9;CL:0000453,9.73e-09,5;CL:0000134,8.33e-08,354;CL:0002320,1.36e-07,361;CL:0000840,2.02e-07,5;CL:0001029,2.02e-07,5;CL:0000219,7.58e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.60e-33!80;UBERON:0001474!8.59e-33!86;UBERON:0004765!9.57e-27!101;UBERON:0001434!9.57e-27!101;UBERON:0002390!1.25e-24!102;UBERON:0003061!1.25e-24!102;UBERON:0002193!9.64e-22!112;UBERON:0002405!5.65e-21!115;UBERON:0002204!4.54e-13!167;UBERON:0002384!7.68e-12!375;UBERON:0003081!1.04e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.06e-22,76;UBERON:0001474,3.37e-20,82;UBERON:0004765,3.15e-18,90;UBERON:0002405,1.41e-17,93;UBERON:0002390,1.41e-16,98;UBERON:0003061,1.41e-16,98;UBERON:0001434,3.33e-16,100;UBERON:0002193,7.53e-15,108;UBERON:0002204,7.82e-09,167;UBERON:0002384,2.64e-07,371;UBERON:0003081,7.25e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.91914699048606,0.77408061658038,0,0,0,0,0,0,2.21598163412751,2.00544447470142,4.34021741431704,0,0,0,0,0,0,1.16214518452842,0.411167888021826,0.929119112685311,0.28769239232215,1.0246428261164,0.236482229888585,0.689491361473237,0.645484683583826,2.70852973188684,0,0.272906150057846,0,1.22433556948361,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,1.70215567407342,1.24564449799115,1.00499466102697,0,0.434377689410233,0.605399502633369,1.10483290796269,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0.393010762749165,1.23360899399706,0,0,0,0,0,0.589211814949674,0.443067789167242,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20964045934839,1.87208137048455,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.91914699048606,0.77408061658038,0,0,0,0,0,0,2.21598163412751,2.00544447470142,4.34021741431704,0,0,0,0,0,0,1.16214518452842,0.411167888021826,0.929119112685311,0.28769239232215,1.0246428261164,0.236482229888585,0.689491361473237,0.645484683583826,2.70852973188684,0,0.272906150057846,0,1.22433556948361,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,1.70215567407342,1.24564449799115,1.00499466102697,0,0.434377689410233,0.605399502633369,1.10483290796269,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0.393010762749165,1.23360899399706,0,0,0,0,0,0.589211814949674,0.443067789167242,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20964045934839,1.87208137048455,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:62310937..62310946,+ | |||
}} | }} |
Latest revision as of 23:39, 23 July 2015
Short description: | p@chr11:62310937..62310946, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62310937..62310946, + |
Coexpression cluster: | C489_immature_CD14_Natural_Basophils_CD8_CD4_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.06e-22 | 76 |
bone element | 3.37e-20 | 82 |
skeletal element | 3.15e-18 | 90 |
immune system | 1.41e-17 | 93 |
hematopoietic system | 1.41e-16 | 98 |
blood island | 1.41e-16 | 98 |
skeletal system | 3.33e-16 | 100 |
hemolymphoid system | 7.53e-15 | 108 |
musculoskeletal system | 7.82e-09 | 167 |
connective tissue | 2.64e-07 | 371 |
lateral plate mesoderm | 7.25e-07 | 203 |