FFCP PHASE1:Hg19::chr11:86519290..86519308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:86519290..86519308,+ | |||
|coexpression_cluster_id=C1006 | |coexpression_cluster_id=C1006 | ||
|description=CAGE_peak_at_chr11:86519290..86519308,+ | |description=CAGE_peak_at_chr11:86519290..86519308,+ | ||
|id=chr11:86519290..86519308,+ | |id=chr11:86519290..86519308,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.27e-14!180;CL:0000222!1.69e-12!119;CL:0000057!6.38e-12!75;CL:0000220!3.90e-10!246;CL:0002321!5.12e-10!248;CL:0000213!1.93e-08!57;CL:0000215!1.93e-08!57;CL:0000548!1.34e-07!679;CL:0000004!1.34e-07!679;CL:0000255!1.34e-07!679;CL:0002139!1.58e-07!24;CL:0000012!3.26e-07!682;CL:0000066!4.05e-07!254 | |ontology_enrichment_celltype=CL:0000055!2.27e-14!180;CL:0000222!1.69e-12!119;CL:0000057!6.38e-12!75;CL:0000220!3.90e-10!246;CL:0002321!5.12e-10!248;CL:0000213!1.93e-08!57;CL:0000215!1.93e-08!57;CL:0000548!1.34e-07!679;CL:0000004!1.34e-07!679;CL:0000255!1.34e-07!679;CL:0002139!1.58e-07!24;CL:0000012!3.26e-07!682;CL:0000066!4.05e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.03e-07;3!CL:0000388;1.03e-07;3!CL:0002615;3.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.24e-08,121;CL:0000135,9.32e-08,3;CL:0000388,9.32e-08,3;CL:0000115,2.75e-07,36;CL:0000213,3.60e-07,58;CL:0000215,3.60e-07,58;CL:0002615,5.98e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.06e-07;3!DOID:127;1.06e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.52e-08,3;DOID:127,9.52e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.26e-16!79;UBERON:0007798!3.26e-16!79;UBERON:0000055!8.40e-14!69;UBERON:0004535!2.52e-13!110;UBERON:0003914!3.44e-13!118;UBERON:0001981!7.17e-13!60;UBERON:0007500!7.17e-13!60;UBERON:0004537!7.17e-13!60;UBERON:0006965!7.17e-13!60;UBERON:0001009!9.98e-13!113;UBERON:0004872!9.33e-12!84;UBERON:0001637!4.98e-10!42;UBERON:0003509!4.98e-10!42;UBERON:0004572!4.98e-10!42;UBERON:0000477!2.15e-09!286;UBERON:0002100!3.91e-08!216;UBERON:0000490!4.23e-08!138;UBERON:0004573!5.78e-08!33;UBERON:0004571!5.78e-08!33 | |ontology_enrichment_uberon=UBERON:0002049!3.26e-16!79;UBERON:0007798!3.26e-16!79;UBERON:0000055!8.40e-14!69;UBERON:0004535!2.52e-13!110;UBERON:0003914!3.44e-13!118;UBERON:0001981!7.17e-13!60;UBERON:0007500!7.17e-13!60;UBERON:0004537!7.17e-13!60;UBERON:0006965!7.17e-13!60;UBERON:0001009!9.98e-13!113;UBERON:0004872!9.33e-12!84;UBERON:0001637!4.98e-10!42;UBERON:0003509!4.98e-10!42;UBERON:0004572!4.98e-10!42;UBERON:0000477!2.15e-09!286;UBERON:0002100!3.91e-08!216;UBERON:0000490!4.23e-08!138;UBERON:0004573!5.78e-08!33;UBERON:0004571!5.78e-08!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.28e-11;6!UBERON:0002358;1.28e-11;6!UBERON:0003684;1.28e-11;6!UBERON:0001178;1.28e-11;6!UBERON:0007846;1.03e-07;3!UBERON:0000043;1.03e-07;3!UBERON:0007845;1.03e-07;3!UBERON:0004457;1.83e-07;9!UBERON:0000042;1.83e-07;9!UBERON:0001737;7.89e-07;9!UBERON:0001557;7.89e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.18e-11,6;UBERON:0002358,1.18e-11,6;UBERON:0003684,1.18e-11,6;UBERON:0001178,1.18e-11,6;UBERON:0002049,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0000055,4.17e-10,68;UBERON:0007500,2.10e-09,59;UBERON:0001981,2.10e-09,59;UBERON:0004537,2.10e-09,59;UBERON:0006965,2.10e-09,59;UBERON:0004535,1.08e-08,109;UBERON:0001009,2.92e-08,112;UBERON:0004872,4.25e-08,83;UBERON:0007846,9.32e-08,3;UBERON:0000043,9.32e-08,3;UBERON:0007845,9.32e-08,3;UBERON:0001637,2.26e-07,42;UBERON:0003509,2.26e-07,42;UBERON:0004572,2.26e-07,42;UBERON:0003914,4.60e-07,117;UBERON:0001737,7.93e-07,9 | |||
|phase1_expression=0.54503513781167,4.06790995392868,1.12763523276777,3.00219895059391,4.02264984984559,5.23403114460221,2.53299878168311,0,0,0.245733936501509,0,0,1.05506791291381,0.74259811776028,0.994192127183747,2.01697543935533,0,0,0.975865597581014,0.123121058076788,0.816002764977012,0.313454721478088,0,0.410623275218653,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,1.34140171940727,0.12786256184353,0.722878304769133,3.00802746381534,1.73815822752988,0,0.486634870302636,0.472674085820339,3.54767035940102,1.84453049955565,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,1.6507082516404,2.29894463190492,0.516833518338658,1.06729878806013,0,1.61131726843659,0,1.70843440283719,0.735326160691737,2.43042584364528,0.267899184852239,0.22452937262617,0.112611480483322,1.53316637465883,0.949265659568129,1.09921046358244,0,0,0,0,0.379891534993739,0.529636723252875,2.86836620748814,2.12801029319014,0.560677600142307,1.06748995729705,1.48000529050296,0,0.404132016209064,1.30769522490767,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0,0,0.61246251376468,0.491337269247072,0.103325781175765,1.18800285728205,1.7308685049499,0,0.718618141816238,0.505008341862199,0.750711119231785,0,0.438977620880838,2.14541457059314,0.45071417671979,0.794025282120147,1.25572744982203,0.640672166455702,0.423863802319124,0.300091096084402,0,1.03056216018252,0.37223371266318,0.675105328965065,0,0.504867548488229,0.184099797284599,0.646584227275248,0,0.302256294682921,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0,0.252320850875628,0,0,5.78916844373597,0,1.39310378409594,0.721879481669586,1.41968160047813,1.51726221070292,0.241011029883482,1.98529150918309,0.653638332277218,1.18635309555548,1.07865046528132,1.17732879075208,0.38474715694639,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0,0,0,0,0,0.463721619900307,0.117408694235822,1.01056513432752,0.925971025153221,1.14152491340759,0,0.858486162094873,0,0,0,0,1.00789276919316,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0,0,0.336393253036082,0.87192013766656,0.36669142910475,0,0,0,0.26593811658487,1.04007436911366,0,1.41849132023278,0,0.142977993658148,0,0.823240336780769,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0.479249710983165,2.29723871668228,0,0.434343920002738,1.84928690295345,0,0,0,0.431255149719035,0,0,0,0,0,1.27587750330633,0,0,0,0,1.00034104211935,0.542530047399471,0.831883446123229,9.45673640624957,3.94256037584837,1.40569697991256,0,6.82222512167955,1.03473071292505,0,0.184369168541703,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.744323423456331,1.2276957863045,3.08726103876381,1.15325234330131,1.53512174720011,1.93024705372329,2.96836132889982,0,0,0.164254312027618,0,0.116210378459959,0.241718899183244,2.80709058424599,0.276242966807689,0.229628896329213,0.728364672026868,0.262248829918848,0,0.231046011313244,0,1.46139224653261,0.316654886678627,2.27466768141793,2.2112181685947,0.863663664408557,3.08454505380579,0,1.00337954770971,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,1.30012049207304,0,0,0,0.921022048356777,0,0,0.290033387828457,0.426133137080504,0,0.330569830721956,0.960950336825531,0,0,0,0.31481234683064,0,0,1.06461206063404,0,0.74129687641568,0.286249773483982,0.372158369359667,0.316379424718726,1.5250415513906,0.255897791311334,0,0.318203247925937,2.35484592059769,0.359744915166629,0.823611089208164,0.117812402345686,0.404364963146632,1.58510321173008,1.26377536871694,0.48763373908959,0.731140468893853,2.11300293513511,0.272999822815972,0.565621727814851,2.26016233240486,0.551365343546124,3.3171948762061,2.63070531152258,0,0,0,0.92947049429925,0.845086807596724,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,1.7737206141467,0.229723400206959,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.614321404198464,0,0,0.556543525114529,0,0,1.59398390600856,0,0,0.20453736500431,0,1.55519793830904,0.179736702294654,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0.520874984799877,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,2.10998064528027,0.163232808159148,0.424059214301822,0,0.995261931078505,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0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| ||
|short_description=p@chr11:86519290..86519308,+ | |short_description=p@chr11:86519290..86519308,+ | ||
}} | }} |
Latest revision as of 03:19, 24 July 2015
Short description: | p@chr11:86519290..86519308, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:86519290..86519308, + |
Coexpression cluster: | C1006_Adipocyte_Olfactory_Preadipocyte_tenocyte_Hair_meningioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.24e-08 | 121 |
fibrocyte | 9.32e-08 | 3 |
tendon cell | 9.32e-08 | 3 |
endothelial cell | 2.75e-07 | 36 |
lining cell | 3.60e-07 | 58 |
barrier cell | 3.60e-07 | 58 |
adipocyte of omentum tissue | 5.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.18e-11 | 6 |
peritoneum | 1.18e-11 | 6 |
abdominal cavity | 1.18e-11 | 6 |
visceral peritoneum | 1.18e-11 | 6 |
vasculature | 5.31e-11 | 78 |
vascular system | 5.31e-11 | 78 |
vessel | 4.17e-10 | 68 |
epithelial tube open at both ends | 2.10e-09 | 59 |
blood vessel | 2.10e-09 | 59 |
blood vasculature | 2.10e-09 | 59 |
vascular cord | 2.10e-09 | 59 |
cardiovascular system | 1.08e-08 | 109 |
circulatory system | 2.92e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 4.25e-08 | 83 |
dense regular connective tissue | 9.32e-08 | 3 |
tendon | 9.32e-08 | 3 |
regular connective tissue | 9.32e-08 | 3 |
artery | 2.26e-07 | 42 |
arterial blood vessel | 2.26e-07 | 42 |
arterial system | 2.26e-07 | 42 |
epithelial tube | 4.60e-07 | 117 |
larynx | 7.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.52e-08 | 3 |
leiomyoma | 9.52e-08 | 3 |