FFCP PHASE1:Hg19::chr12:102315613..102315638,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:102315613..102315638,+ to FFCP PHASE1:Hg19::chr12:102315613..102315638,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:102315613..102315638,+ | |||
|description=CAGE_peak_at_chr12:102315613..102315638,+ | |||
|id=chr12:102315613..102315638,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.48e-14!45;CL:0002057!3.49e-14!42;CL:0002194!4.17e-12!63;CL:0000576!4.17e-12!63;CL:0000040!4.17e-12!63;CL:0000559!4.17e-12!63;CL:0002009!2.76e-11!65;CL:0000839!6.09e-10!70;CL:0000557!1.32e-09!71;CL:0000766!4.28e-08!76;CL:0000012!1.23e-07!682;CL:0000548!1.26e-07!679;CL:0000004!1.26e-07!679;CL:0000255!1.26e-07!679;CL:0000144!1.60e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.86e-18;39!CL:0000234;3.86e-18;39!CL:0000860;5.74e-17;33!CL:0002057;5.74e-17;33!CL:0002595;1.49e-12;5!CL:0000135;3.56e-12;3!CL:0000388;3.56e-12;3!CL:0000197;2.45e-11;6!CL:0000098;2.45e-11;6!CL:0002167;2.45e-11;6!CL:0002593;1.12e-08;2!CL:0000235;8.24e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.01e-18,48;CL:0000234,3.01e-18,48;CL:0002194,7.84e-14,59;CL:0000576,7.84e-14,59;CL:0000040,7.84e-14,59;CL:0000559,7.84e-14,59;CL:0000860,9.41e-14,42;CL:0002057,9.41e-14,42;CL:0002009,2.90e-13,61;CL:0002595,1.70e-12,5;CL:0000135,2.07e-12,3;CL:0000388,2.07e-12,3;CL:0000839,5.40e-12,66;CL:0000557,9.19e-12,67;CL:0000197,3.67e-11,6;CL:0000098,3.67e-11,6;CL:0002167,3.67e-11,6;CL:0000766,1.05e-10,72;CL:0002593,1.26e-08,2;CL:0000235,9.59e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.68e-09!167;UBERON:0002371!4.81e-09!80;UBERON:0004765!2.90e-08!101;UBERON:0001434!2.90e-08!101;UBERON:0000926!4.72e-08!448;UBERON:0004120!4.72e-08!448;UBERON:0006603!4.72e-08!448;UBERON:0002405!1.32e-07!115;UBERON:0001474!1.88e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.33e-13;7!UBERON:0003834;1.49e-12;5!UBERON:0001533;1.49e-12;5!UBERON:0007846;3.56e-12;3!UBERON:0000043;3.56e-12;3!UBERON:0007845;3.56e-12;3!UBERON:0002456;1.12e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,1.30e-13,7;UBERON:0003834,1.70e-12,5;UBERON:0001533,1.70e-12,5;UBERON:0007846,2.07e-12,3;UBERON:0000043,2.07e-12,3;UBERON:0007845,2.07e-12,3;UBERON:0002371,2.06e-11,76;UBERON:0002204,4.83e-11,167;UBERON:0001474,2.65e-10,82;UBERON:0001434,3.50e-10,100;UBERON:0004765,4.68e-09,90;UBERON:0002405,1.20e-08,93;UBERON:0002456,1.26e-08,2;UBERON:0002390,5.11e-08,98;UBERON:0003061,5.11e-08,98;UBERON:0002193,6.07e-07,108 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,2.00146596706261,0.446961094427288,1.74467704820074,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0,0,0.290796477559129,0.755751887377619,0.242584061187816,0.929716147622738,0.822335776043652,1.23882548358041,0.863077176966451,0.256160706529101,1.41889337933151,1.72372840368309,1.29096936716765,2.70852973188684,0.564727018627814,0.545812300115692,0.898893937780338,4.28517449319264,0.641858054152187,2.55734850319616,0.329851300186716,0.199463657621632,0.852449501065388,6.67481248845743,3.40431134814684,2.4912889959823,0.75374599577023,0,0.868755378820466,3.02699751316684,1.84138817993782,3.48108626184973,0.211255286311942,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0.722878304769133,0,0.579386075843295,0,0,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0.398873881556595,0,0,0,0,0,0.347140501607594,0,0,0.825354125820202,0,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0.860509862246441,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,1.7308685049499,0,0,0,0.250237039743928,0,0,0.30648779579902,0.901428353439581,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0,0.558350568994769,0.168776332241266,0,0,0.552299391853796,0.646584227275248,0.710019185033229,0.503760491138201,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.473227200159376,0.674338760312407,0.241011029883482,1.10293972732394,0.435758888184812,0.71181185733329,0.404493924480493,0.392442930250692,0.38474715694639,1.4763109092493,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,0.925971025153221,0.761016608938393,0,0,1.23108503043699,0.234004265139238,0.743155811443641,0,0.839910640994298,0.141775097242386,0.179117045405697,0,0,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0,0,0.857479297891735,0,0,0,0.258543431515556,0,0,1.32969058292435,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,1.50719688529793,0.871533458600294,0.699810938274399,0,3.01354254859276,6.32501818449095,0,0,0,0.144781306667579,0.410952645100767,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,2.28767947683888,13.3821741597871,2.05013139544115,1.05427273493442,0.300946099727719,0,0,0,0,0.955719759148911,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,0,0,0.640695746278505,0,0.482561763430822,0,0,0.177561725313127,0,0,0.116210378459959,0,0.802025881213139,0.0920809889358963,0.229628896329213,0.546273504020151,1.31124414959424,0,0.15403067420883,0,0,0.422206515571503,0,0.340187410553031,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,1.39453664789186,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.589062011728432,0,0,0.421258456238981,0,1.70599442741899,1.05650146756755,0.272999822815972,0.424216295861138,0,0,1.32687795048244,1.31535265576129,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,2.32218398827431,5.26871828735843,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0.269272933229316,0,0.31900115973192,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0.067401132980677,0,0,0,0.19566461893209,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0.662091970365432,0,0.542999601753713,6.04955043840887,2.28611152076586,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0.4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| ||
|short_description=p@chr12:102315613..102315638,+ | |||
}} | }} |
Latest revision as of 04:05, 24 July 2015
Short description: | p@chr12:102315613..102315638, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:102315613..102315638, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.01e-18 | 48 |
phagocyte | 3.01e-18 | 48 |
monopoietic cell | 7.84e-14 | 59 |
monocyte | 7.84e-14 | 59 |
monoblast | 7.84e-14 | 59 |
promonocyte | 7.84e-14 | 59 |
classical monocyte | 9.41e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.41e-14 | 42 |
macrophage dendritic cell progenitor | 2.90e-13 | 61 |
smooth muscle cell of the subclavian artery | 1.70e-12 | 5 |
fibrocyte | 2.07e-12 | 3 |
tendon cell | 2.07e-12 | 3 |
myeloid lineage restricted progenitor cell | 5.40e-12 | 66 |
granulocyte monocyte progenitor cell | 9.19e-12 | 67 |
receptor cell | 3.67e-11 | 6 |
sensory epithelial cell | 3.67e-11 | 6 |
olfactory epithelial cell | 3.67e-11 | 6 |
myeloid leukocyte | 1.05e-10 | 72 |
smooth muscle cell of the internal thoracic artery | 1.26e-08 | 2 |
macrophage | 9.59e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 1.30e-13 | 7 |
thoracic segment blood vessel | 1.70e-12 | 5 |
subclavian artery | 1.70e-12 | 5 |
dense regular connective tissue | 2.07e-12 | 3 |
tendon | 2.07e-12 | 3 |
regular connective tissue | 2.07e-12 | 3 |
bone marrow | 2.06e-11 | 76 |
musculoskeletal system | 4.83e-11 | 167 |
bone element | 2.65e-10 | 82 |
skeletal system | 3.50e-10 | 100 |
skeletal element | 4.68e-09 | 90 |
immune system | 1.20e-08 | 93 |
internal thoracic artery | 1.26e-08 | 2 |
hematopoietic system | 5.11e-08 | 98 |
blood island | 5.11e-08 | 98 |
hemolymphoid system | 6.07e-07 | 108 |