FFCP PHASE1:Hg19::chr12:109024446..109024466,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109024446..109024466,- | |||
|description=CAGE_peak_at_chr12:109024446..109024466,- | |description=CAGE_peak_at_chr12:109024446..109024466,- | ||
|id=chr12:109024446..109024466,- | |id=chr12:109024446..109024466,- | ||
|ontology_enrichment_celltype=CL:0000055!3.89e-20!180;CL:0000057!8.80e-18!75;CL:0000144!2.20e-17!625;CL:0000048!1.56e-16!430;CL:0000723!2.17e-16!436;CL:0000548!5.84e-16!679;CL:0000004!5.84e-16!679;CL:0000255!5.84e-16!679;CL:0000012!1.76e-15!682;CL:0000034!2.67e-15!444;CL:0002620!1.35e-13!23;CL:0002371!2.76e-13!591;CL:0000003!2.35e-11!722;CL:0000134!1.64e-10!358;CL:0002320!2.00e-10!365;CL:0000219!1.92e-09!390;CL:0000680!1.04e-07!57;CL:0000056!1.04e-07!57;CL:0000355!1.04e-07!57;CL:0000077!1.59e-07!19;CL:0002194!2.45e-07!63;CL:0000576!2.45e-07!63;CL:0000040!2.45e-07!63;CL:0000559!2.45e-07!63;CL:0000860!3.60e-07!45;CL:0000063!7.38e-07!578;CL:0002009!9.23e-07!65 | |ontology_enrichment_celltype=CL:0000055!3.89e-20!180;CL:0000057!8.80e-18!75;CL:0000144!2.20e-17!625;CL:0000048!1.56e-16!430;CL:0000723!2.17e-16!436;CL:0000548!5.84e-16!679;CL:0000004!5.84e-16!679;CL:0000255!5.84e-16!679;CL:0000012!1.76e-15!682;CL:0000034!2.67e-15!444;CL:0002620!1.35e-13!23;CL:0002371!2.76e-13!591;CL:0000003!2.35e-11!722;CL:0000134!1.64e-10!358;CL:0002320!2.00e-10!365;CL:0000219!1.92e-09!390;CL:0000680!1.04e-07!57;CL:0000056!1.04e-07!57;CL:0000355!1.04e-07!57;CL:0000077!1.59e-07!19;CL:0002194!2.45e-07!63;CL:0000576!2.45e-07!63;CL:0000040!2.45e-07!63;CL:0000559!2.45e-07!63;CL:0000860!3.60e-07!45;CL:0000063!7.38e-07!578;CL:0002009!9.23e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.45e-17;23!CL:0000473;2.03e-08;39!CL:0000234;2.03e-08;39!CL:0000346;4.96e-07;3!CL:1000428;4.96e-07;3 | |ontology_enrichment_celltype_v019=CL:0002620;8.45e-17;23!CL:0000473;2.03e-08;39!CL:0000234;2.03e-08;39!CL:0000346;4.96e-07;3!CL:1000428;4.96e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.38e-16,23;CL:0000057,1.88e-15,76;CL:0000473,4.46e-07,48;CL:0000234,4.46e-07,48;CL:0000346,4.92e-07,3;CL:1000428,4.92e-07,3;CL:0000135,9.99e-07,3;CL:0000388,9.99e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;6.08e-07;3!DOID:127;6.08e-07;3 | |ontology_enrichment_disease_v019=DOID:0060084;6.08e-07;3!DOID:127;6.08e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.08e-07,3;DOID:127,6.08e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.96e-17!167;UBERON:0000914!2.79e-13!83;UBERON:0002329!2.79e-13!83;UBERON:0003077!2.79e-13!83;UBERON:0003059!2.79e-13!83;UBERON:0007282!2.79e-13!83;UBERON:0009618!2.79e-13!83;UBERON:0007285!2.79e-13!83;UBERON:0003102!2.33e-11!95;UBERON:0000486!9.21e-11!82;UBERON:0002384!1.13e-10!375;UBERON:0002199!1.60e-10!45;UBERON:0002416!1.60e-10!45;UBERON:0002097!1.96e-10!40;UBERON:0004290!2.07e-10!70;UBERON:0004765!4.71e-09!101;UBERON:0001434!4.71e-09!101;UBERON:0002371!6.51e-07!80;UBERON:0001134!6.59e-07!61;UBERON:0002036!6.59e-07!61;UBERON:0003082!6.59e-07!61;UBERON:0002385!8.87e-07!63;UBERON:0001015!8.87e-07!63;UBERON:0000383!8.87e-07!63 | |ontology_enrichment_uberon=UBERON:0002204!5.96e-17!167;UBERON:0000914!2.79e-13!83;UBERON:0002329!2.79e-13!83;UBERON:0003077!2.79e-13!83;UBERON:0003059!2.79e-13!83;UBERON:0007282!2.79e-13!83;UBERON:0009618!2.79e-13!83;UBERON:0007285!2.79e-13!83;UBERON:0003102!2.33e-11!95;UBERON:0000486!9.21e-11!82;UBERON:0002384!1.13e-10!375;UBERON:0002199!1.60e-10!45;UBERON:0002416!1.60e-10!45;UBERON:0002097!1.96e-10!40;UBERON:0004290!2.07e-10!70;UBERON:0004765!4.71e-09!101;UBERON:0001434!4.71e-09!101;UBERON:0002371!6.51e-07!80;UBERON:0001134!6.59e-07!61;UBERON:0002036!6.59e-07!61;UBERON:0003082!6.59e-07!61;UBERON:0002385!8.87e-07!63;UBERON:0001015!8.87e-07!63;UBERON:0000383!8.87e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.59e-10;41!UBERON:0002199;3.59e-07;46!UBERON:0002416;3.59e-07;46!UBERON:0000412;4.96e-07;3!UBERON:0001992;4.96e-07;3!UBERON:0002067;5.07e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002097;3.59e-10;41!UBERON:0002199;3.59e-07;46!UBERON:0002416;3.59e-07;46!UBERON:0000412;4.96e-07;3!UBERON:0001992;4.96e-07;3!UBERON:0002067;5.07e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.57e-13,41;UBERON:0002199,9.35e-11,46;UBERON:0002416,9.35e-11,46;UBERON:0003102,1.20e-09,99;UBERON:0002067,4.13e-07,9;UBERON:0004016,4.13e-07,9;UBERON:0010083,4.13e-07,9;UBERON:0002204,4.83e-07,167;UBERON:0000412,4.92e-07,3;UBERON:0001992,4.92e-07,3;UBERON:0007846,9.99e-07,3;UBERON:0000043,9.99e-07,3;UBERON:0007845,9.99e-07,3 | |||
|phase1_expression=0,2.35510576280081,0.422863212287913,1.0007329835313,0,0,0,0.631719873426831,0,0,0,1.31064823278103,1.31883489114227,0,0.662794751455832,1.34465029290355,1.80808358407193,0,0,1.35433163884467,0.612002073732759,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0.726991193897824,0,0,0.929716147622738,0.822335776043652,0.619412741790207,7.19230980805376,5.37937483711111,7.09446689665756,1.03423704220986,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0,0.320929027076094,0.639337125799041,10.5552416059749,6.18337338627059,6.81959600852311,1.16083695451434,1.13477044938228,0,6.28121663141858,5.73631210262222,6.08128765174327,0,1.10483290796269,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,1.5905718941022,0,0,0,0,0,0,0,0,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,0.506522046658319,1.85372853138506,2.58152958673932,0.709336764396714,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,2.85235910772225,0.298897361103602,0.469737994575059,1.13311061057692,1.96631129383148,3.67477508258808,3.19369225010597,2.16984140469107,0,0.741800787835671,0.910161361938026,0,3.53505839303539,2.12701483782339,3.60183350129438,0,0.612975591598039,0.300476117813194,0.226864366320042,5.91985797773244,0.85422955527427,1.05965950579781,9.60291507470087,2.06105058476878,1.03056216018252,2.04728541964749,11.4767905924061,2.82567314967476,0.757301322732344,0.920498986422993,3.87950536365149,5.32514388774922,2.82105875037393,2.37384829234683,1.15956511897978,0.818238361772504,1.43402297694502,0.121973706129595,0,0,0,0,0,18.7739438795779,22.513432836751,2.76269842704961,0,0,0,0.168584690078102,0.964044119533928,0.220587945464788,0,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,4.67812311566055,3.04205544681009,9.06650089961242,1.87467667973554,1.51183915378974,0.850650583454319,0,0,0,2.95597942737566,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0.542621605391443,0.823240336780769,0,0,1.58390374586686,6.02878754119172,5.22920075160176,3.89894665610022,1.2162378064119,0,0,0,0,2.85273810081437,1.15825045334063,0.821905290201534,6.08807275015645,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,1.66376689224646,4.28229573113188,1.41932173530541,1.63997980989798,0,0,0,0.664225598535437,0.368738337083406,1.30325421702124,0,0,0,0,0,0.303127571446259,1.66435439510497,1.5119514666484,0.744323423456331,0.767309866440312,0.841980283299221,0.768834895534206,0,0.160853921143607,0,0.925258162815933,0.532685175939381,2.38168752440047,0.519254429183621,1.39452454151951,0,0.40101294060657,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0.206082023295445,0.366277859273374,0.082509499920588,0,1.30012049207304,1.6068392984416,0.290012154876366,0.154048617114644,0.307007349452259,0.551346289938122,0.537101224341368,0.290033387828457,0.596586391912706,0.356128142586949,0,0.192190067365106,0.255225424989168,0,0,3.1481234683064,0,0.924100740528266,0,0.869932992075073,0.55597265731176,0.572499546967965,0,0,0,0,0,0.636406495851874,2.35484592059769,0.179872457583315,0.54907405947211,0.589062011728432,0.404364963146632,0,0,0.48763373908959,0.487426979262569,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,1.65409603063837,1.32687795048244,0.438450885253763,0.578775534266688,0,0.202910376962704,0.6196469961995,0,1.57752487424457,0.88424136911809,0,0.354761064070598,0.211107635297664,0.658589785919804,1.89736586882858,1.39973888097993,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0.329607748453519,0,0,0,0,0.613612095012929,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0,0.31900115973192,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.252746318513952,0,0,0,0.330991955875499,0,0,0,0,0,0,0.609414446062818,0,0,1.54810130062536,1.46178634172371,1.64230914106418,0,0,0,0,0.397429223405979,0,0,1.04206466326994,0,0.39961921916426,0,0,0,0,0.372757606696298,0.471388069233591,3.12579673969312,3.8703053135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| ||
|short_description=p@chr12:109024446..109024466,- | |short_description=p@chr12:109024446..109024466,- | ||
}} | }} |
Latest revision as of 04:39, 24 July 2015
Short description: | p@chr12:109024446..109024466, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109024446..109024466, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.38e-16 | 23 |
fibroblast | 1.88e-15 | 76 |
defensive cell | 4.46e-07 | 48 |
phagocyte | 4.46e-07 | 48 |
hair follicle dermal papilla cell | 4.92e-07 | 3 |
stem cell of epidermis | 4.92e-07 | 3 |
fibrocyte | 9.99e-07 | 3 |
tendon cell | 9.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.57e-13 | 41 |
integument | 9.35e-11 | 46 |
integumental system | 9.35e-11 | 46 |
surface structure | 1.20e-09 | 99 |
dermis | 4.13e-07 | 9 |
dermatome | 4.13e-07 | 9 |
future dermis | 4.13e-07 | 9 |
musculoskeletal system | 4.83e-07 | 167 |
dermal papilla | 4.92e-07 | 3 |
papillary layer of dermis | 4.92e-07 | 3 |
dense regular connective tissue | 9.99e-07 | 3 |
tendon | 9.99e-07 | 3 |
regular connective tissue | 9.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.08e-07 | 3 |
leiomyoma | 6.08e-07 | 3 |