FFCP PHASE1:Hg19::chr12:113346535..113346546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113346535..113346546,+ | |||
|description=CAGE_peak_at_chr12:113346535..113346546,+ | |description=CAGE_peak_at_chr12:113346535..113346546,+ | ||
|id=chr12:113346535..113346546,+ | |id=chr12:113346535..113346546,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.95e-17!45;CL:0002057!5.00e-16!42;CL:0002194!1.89e-14!63;CL:0000576!1.89e-14!63;CL:0000040!1.89e-14!63;CL:0000559!1.89e-14!63;CL:0002009!9.66e-14!65;CL:0002087!2.43e-12!119;CL:0000839!3.70e-12!70;CL:0000557!7.18e-12!71;CL:0000766!1.56e-11!76;CL:0000738!3.17e-10!140;CL:0002031!5.80e-10!124;CL:0002393!3.03e-08!9;CL:0002397!3.03e-08!9;CL:0000037!8.36e-07!172;CL:0000566!8.36e-07!172 | |ontology_enrichment_celltype=CL:0000860!4.95e-17!45;CL:0002057!5.00e-16!42;CL:0002194!1.89e-14!63;CL:0000576!1.89e-14!63;CL:0000040!1.89e-14!63;CL:0000559!1.89e-14!63;CL:0002009!9.66e-14!65;CL:0002087!2.43e-12!119;CL:0000839!3.70e-12!70;CL:0000557!7.18e-12!71;CL:0000766!1.56e-11!76;CL:0000738!3.17e-10!140;CL:0002031!5.80e-10!124;CL:0002393!3.03e-08!9;CL:0002397!3.03e-08!9;CL:0000037!8.36e-07!172;CL:0000566!8.36e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0002379;6.44e-16;1!CL:0002595;1.95e-12;5!CL:0002593;1.20e-08;2!CL:0000576;2.17e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,6.44e-16,1;CL:0002595,1.89e-12,5;CL:0002593,1.20e-08,2;CL:0002194,3.12e-08,59;CL:0000576,3.12e-08,59;CL:0000040,3.12e-08,59;CL:0000559,3.12e-08,59;CL:0002009,5.89e-08,61;CL:0000473,2.11e-07,48;CL:0000234,2.11e-07,48;CL:0000839,2.45e-07,66;CL:0000557,3.17e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.28e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;6.44e-16;1!DOID:3565;6.44e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,6.44e-16,1;DOID:3565,6.44e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.67e-13!9;UBERON:0002390!3.57e-12!102;UBERON:0003061!3.57e-12!102;UBERON:0002371!1.98e-10!80;UBERON:0002193!3.62e-10!112;UBERON:0004765!1.79e-09!101;UBERON:0001434!1.79e-09!101;UBERON:0001474!3.91e-09!86;UBERON:0001557!6.44e-09!19;UBERON:0002405!9.73e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.95e-12;5!UBERON:0001533;1.95e-12;5!UBERON:0003513;3.80e-09;7!UBERON:0002456;1.20e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.89e-12,5;UBERON:0001533,1.89e-12,5;UBERON:0003513,3.73e-09,7;UBERON:0002456,1.20e-08,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.971680998056939,1.03030227053675,0,0,0,0,0,0.309706370895104,2.58923153089935,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,2.30895910130701,0.398927315243264,0.852449501065388,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0,0,0,0.316462387440884,0.211255286311942,0.425208599930087,0.838634582033504,0.44931452458598,0.150176892841506,0.16072558669708,0.285012743741249,1.39241674039363,0.547992461293902,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0.443067789167242,0,0.384273959177026,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0.571994910780128,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.772057809126758,0.435758888184812,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6305563029944,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0.586654148204409,0,0.213452994739353,0.999048047910651,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,1.43429871466276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2937214757744,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0,0,0,1.71315693154527,0,0,0,0,0,0.844712203265363,0,0,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0.199882311849858,0,0,0,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,2.34640942403454,0,0,0,0,0.641136984606466 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.971680998056939,1.03030227053675,0,0,0,0,0,0.309706370895104,2.58923153089935,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,2.30895910130701,0.398927315243264,0.852449501065388,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0,0,0,0.316462387440884,0.211255286311942,0.425208599930087,0.838634582033504,0.44931452458598,0.150176892841506,0.16072558669708,0.285012743741249,1.39241674039363,0.547992461293902,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0.443067789167242,0,0.384273959177026,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0.571994910780128,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.772057809126758,0.435758888184812,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6305563029944,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0.586654148204409,0,0.213452994739353,0.999048047910651,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,1.43429871466276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2937214757744,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0,0,0,1.71315693154527,0,0,0,0,0,0.844712203265363,0,0,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0.199882311849858,0,0,0,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,2.34640942403454,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr12:113346535..113346546,+ | |short_description=p@chr12:113346535..113346546,+ | ||
}} | }} |
Latest revision as of 05:08, 24 July 2015
Short description: | p@chr12:113346535..113346546, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113346535..113346546, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 6.44e-16 | 1 |
smooth muscle cell of the subclavian artery | 1.89e-12 | 5 |
smooth muscle cell of the internal thoracic artery | 1.20e-08 | 2 |
monopoietic cell | 3.12e-08 | 59 |
monocyte | 3.12e-08 | 59 |
monoblast | 3.12e-08 | 59 |
promonocyte | 3.12e-08 | 59 |
macrophage dendritic cell progenitor | 5.89e-08 | 61 |
defensive cell | 2.11e-07 | 48 |
phagocyte | 2.11e-07 | 48 |
myeloid lineage restricted progenitor cell | 2.45e-07 | 66 |
granulocyte monocyte progenitor cell | 3.17e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.89e-12 | 5 |
subclavian artery | 1.89e-12 | 5 |
trunk blood vessel | 3.73e-09 | 7 |
internal thoracic artery | 1.20e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 6.44e-16 | 1 |
meningioma | 6.44e-16 | 1 |