FFCP PHASE1:Hg19::chr12:116955659..116955671,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000552992_5end | |association_with_transcript=0bp_to_ENST00000552992_5end | ||
|cluster_id=chr12:116955659..116955671,+ | |||
|coexpression_cluster_id=C3242 | |coexpression_cluster_id=C3242 | ||
|description=CAGE_peak_1_at_ENST00000552992_5end | |description=CAGE_peak_1_at_ENST00000552992_5end | ||
|id=chr12:116955659..116955671,+ | |id=chr12:116955659..116955671,+ | ||
|ontology_enrichment_celltype=CL:0002159!1.45e-29!13;CL:0002076!8.14e-26!43;CL:0002368!1.51e-23!13;CL:0000223!1.32e-17!59;CL:0000066!5.27e-17!254;CL:0000240!6.05e-17!6;CL:0000311!6.05e-17!6;CL:0000079!6.05e-17!6;CL:0000237!6.05e-17!6;CL:0000036!6.05e-17!6;CL:0000357!6.05e-17!6;CL:0000114!6.05e-17!6;CL:0002077!7.31e-15!33;CL:0000076!5.99e-14!62;CL:0000312!1.82e-13!5;CL:0002621!2.06e-13!3;CL:0002166!2.33e-13!3;CL:0002328!7.21e-13!3;CL:0000362!1.13e-12!8;CL:0002202!3.43e-11!9;CL:0002632!3.43e-11!9;CL:0002251!5.97e-11!21;CL:0000575!1.06e-08!2;CL:0000220!4.16e-08!246;CL:0002321!5.49e-08!248;CL:0000221!1.43e-07!71 | |ontology_enrichment_celltype=CL:0002159!1.45e-29!13;CL:0002076!8.14e-26!43;CL:0002368!1.51e-23!13;CL:0000223!1.32e-17!59;CL:0000066!5.27e-17!254;CL:0000240!6.05e-17!6;CL:0000311!6.05e-17!6;CL:0000079!6.05e-17!6;CL:0000237!6.05e-17!6;CL:0000036!6.05e-17!6;CL:0000357!6.05e-17!6;CL:0000114!6.05e-17!6;CL:0002077!7.31e-15!33;CL:0000076!5.99e-14!62;CL:0000312!1.82e-13!5;CL:0002621!2.06e-13!3;CL:0002166!2.33e-13!3;CL:0002328!7.21e-13!3;CL:0000362!1.13e-12!8;CL:0002202!3.43e-11!9;CL:0002632!3.43e-11!9;CL:0002251!5.97e-11!21;CL:0000575!1.06e-08!2;CL:0000220!4.16e-08!246;CL:0002321!5.49e-08!248;CL:0000221!1.43e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002621;9.74e-46;3!CL:0000312;5.55e-28;5!CL:0002159;3.04e-27;14!CL:0000240;1.90e-23;6!CL:0000311;1.90e-23;6!CL:0000079;1.90e-23;6!CL:0000237;1.90e-23;6!CL:0002166;2.06e-21;3!CL:0002076;5.69e-18;42!CL:0002252;1.78e-16;1!CL:0000362;7.18e-16;9!CL:0002251;2.01e-12;20!CL:0002368;2.38e-11;13!CL:0002077;3.50e-10;34!CL:0002202;8.74e-08;9!CL:0002632;8.74e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,5.68e-46,3;CL:0000312,6.99e-28,5;CL:0002159,3.79e-27,14;CL:0000240,2.30e-23,6;CL:0000311,2.30e-23,6;CL:0000079,2.30e-23,6;CL:0000237,2.30e-23,6;CL:0000036,2.30e-23,6;CL:0000357,2.30e-23,6;CL:0000114,2.30e-23,6;CL:0002166,2.41e-21,3;CL:0002076,2.01e-17,42;CL:0002252,1.41e-16,1;CL:0000362,8.16e-16,9;CL:0000223,1.67e-12,58;CL:0002251,1.73e-12,20;CL:0002368,2.42e-11,13;CL:0002077,3.12e-11,34;CL:0000066,4.34e-09,253;CL:0002202,8.90e-08,9;CL:0002632,8.90e-08,9;CL:0002321,1.31e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;1.90e-23;6!CL:0000114;1.90e-23;6!CL:0000223;4.69e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!3.85e-20!14 | |ontology_enrichment_disease=DOID:1749!3.85e-20!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001949;9.74e-46;3!UBERON:0003929;4.62e-20;7!UBERON:0003350;1.21e-17;8!UBERON:0001828;1.21e-17;8!UBERON:0010371;1.85e-17;31!UBERON:0001708;2.53e-16;4!UBERON:0008895;2.53e-16;4!UBERON:0011159;2.94e-13;5!UBERON:0000486;5.56e-12;12!UBERON:0004807;2.53e-11;22!UBERON:0003729;4.16e-11;13!UBERON:0001003;9.05e-10;15!UBERON:0007376;9.05e-10;15!UBERON:0000161;8.89e-08;19!UBERON:0000166;8.89e-08;19!UBERON:0000344;2.05e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,5.68e-46,3;UBERON:0003350,9.91e-18,8;UBERON:0001828,9.91e-18,8;UBERON:0001708,2.85e-16,4;UBERON:0008895,2.85e-16,4;UBERON:0011159,3.23e-13,5;UBERON:0010188,3.57e-11,6;UBERON:0002539,3.57e-11,6;UBERON:0008816,3.57e-11,6;UBERON:0003729,3.69e-11,13;UBERON:0001003,9.76e-10,15;UBERON:0007376,9.76e-10,15;UBERON:0007383,9.76e-10,15;UBERON:0003102,3.37e-09,99;UBERON:0004807,5.53e-09,28;UBERON:0000344,1.90e-07,20;UBERON:0001004,3.19e-07,74;UBERON:0000166,8.10e-07,22;UBERON:0000033,8.18e-07,56 | |||
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| ||
|short_description=p1@ENST00000552992 | |short_description=p1@ENST00000552992 | ||
}} | }} |
Latest revision as of 05:24, 24 July 2015
Short description: | p1@ENST00000552992 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000552992_5end |
Coexpression cluster: | C3242_Small_Tracheal_Bronchial_Mallassezderived_Keratinocyte_Gingival_Mammary |
Association with transcript: | 0bp_to_ENST00000552992_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 5.68e-46 | 3 |
keratinocyte | 6.99e-28 | 5 |
general ecto-epithelial cell | 3.79e-27 | 14 |
stratified squamous epithelial cell | 2.30e-23 | 6 |
keratin accumulating cell | 2.30e-23 | 6 |
stratified epithelial cell | 2.30e-23 | 6 |
keratinizing barrier epithelial cell | 2.30e-23 | 6 |
epithelial fate stem cell | 2.30e-23 | 6 |
stratified epithelial stem cell | 2.30e-23 | 6 |
surface ectodermal cell | 2.30e-23 | 6 |
epithelial cell of Malassez | 2.41e-21 | 3 |
endo-epithelial cell | 2.01e-17 | 42 |
epithelial cell of esophagus | 1.41e-16 | 1 |
epidermal cell | 8.16e-16 | 9 |
endodermal cell | 1.67e-12 | 58 |
epithelial cell of alimentary canal | 1.73e-12 | 20 |
respiratory epithelial cell | 2.42e-11 | 13 |
ecto-epithelial cell | 3.12e-11 | 34 |
epithelial cell | 4.34e-09 | 253 |
epithelial cell of tracheobronchial tree | 8.90e-08 | 9 |
epithelial cell of lower respiratory tract | 8.90e-08 | 9 |
embryonic cell | 1.31e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 5.68e-46 | 3 |
epithelium of mucosa | 9.91e-18 | 8 |
gingiva | 9.91e-18 | 8 |
jaw skeleton | 2.85e-16 | 4 |
splanchnocranium | 2.85e-16 | 4 |
primary subdivision of cranial skeletal system | 3.23e-13 | 5 |
protuberance | 3.57e-11 | 6 |
pharyngeal arch | 3.57e-11 | 6 |
embryonic head | 3.57e-11 | 6 |
mouth mucosa | 3.69e-11 | 13 |
skin epidermis | 9.76e-10 | 15 |
outer epithelium | 9.76e-10 | 15 |
enveloping layer of ectoderm | 9.76e-10 | 15 |
surface structure | 3.37e-09 | 99 |
respiratory system epithelium | 5.53e-09 | 28 |
mucosa | 1.90e-07 | 20 |
respiratory system | 3.19e-07 | 74 |
oral opening | 8.10e-07 | 22 |
head | 8.18e-07 | 56 |