FFCP PHASE1:Hg19::chr12:132475501..132475504,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:132475501..132475504,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr12:132475501..132475504,+ | |description=CAGE_peak_at_chr12:132475501..132475504,+ | ||
|id=chr12:132475501..132475504,+ | |id=chr12:132475501..132475504,+ | ||
|ontology_enrichment_celltype=CL:0000128!1.99e-32!7;CL:0000126!1.99e-32!7;CL:0000127!1.99e-32!7;CL:0002453!1.99e-32!7;CL:0002603!7.50e-28!3;CL:0000064!8.22e-28!3;CL:0005012!8.22e-28!3;CL:0000067!8.22e-28!3;CL:0002304!8.22e-28!3;CL:0002319!3.60e-26!25;CL:0000133!1.37e-19!59;CL:0000243!7.43e-19!15;CL:0000125!7.43e-19!15;CL:0000030!7.43e-19!15;CL:0000339!7.43e-19!15;CL:0000095!7.86e-17!17;CL:0000123!7.86e-17!17;CL:0000221!4.70e-16!71;CL:0000540!1.52e-14!6;CL:0000031!1.52e-14!6;CL:0000404!1.52e-14!6;CL:0000047!4.79e-11!8;CL:0000306!2.08e-10!4;CL:0002222!2.08e-10!4;CL:0002224!2.08e-10!4;CL:0000075!2.03e-08!27;CL:0000333!3.44e-07!41 | |ontology_enrichment_celltype=CL:0000128!1.99e-32!7;CL:0000126!1.99e-32!7;CL:0000127!1.99e-32!7;CL:0002453!1.99e-32!7;CL:0002603!7.50e-28!3;CL:0000064!8.22e-28!3;CL:0005012!8.22e-28!3;CL:0000067!8.22e-28!3;CL:0002304!8.22e-28!3;CL:0002319!3.60e-26!25;CL:0000133!1.37e-19!59;CL:0000243!7.43e-19!15;CL:0000125!7.43e-19!15;CL:0000030!7.43e-19!15;CL:0000339!7.43e-19!15;CL:0000095!7.86e-17!17;CL:0000123!7.86e-17!17;CL:0000221!4.70e-16!71;CL:0000540!1.52e-14!6;CL:0000031!1.52e-14!6;CL:0000404!1.52e-14!6;CL:0000047!4.79e-11!8;CL:0000306!2.08e-10!4;CL:0002222!2.08e-10!4;CL:0002224!2.08e-10!4;CL:0000075!2.03e-08!27;CL:0000333!3.44e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000306;6.60e-50;4!CL:0002222;6.60e-50;4!CL:0002224;6.60e-50;4!CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:0002319;2.06e-08;25!CL:0000075;2.22e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,6.60e-50,4;CL:0002222,6.60e-50,4;CL:0002224,6.60e-50,4;CL:0000540,1.44e-09,6;CL:0000031,1.44e-09,6;CL:0000404,1.44e-09,6;CL:0000128,1.89e-08,7;CL:0000126,1.89e-08,7;CL:0000127,1.89e-08,7;CL:0002453,1.89e-08,7;CL:0002319,2.06e-08,25;CL:0000075,2.22e-08,27;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.44e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0010077;6.60e-50;4!UBERON:0005389;6.60e-50;4!UBERON:0000484;6.60e-50;4!UBERON:0000965;6.60e-50;4!UBERON:0001803;6.60e-50;4!UBERON:0007625;5.63e-19;11!UBERON:0001801;3.66e-15;14!UBERON:0000019;1.81e-11;19!UBERON:0000047;1.81e-11;19!UBERON:0004088;1.81e-11;19!UBERON:0010230;1.81e-11;19!UBERON:0000970;6.00e-11;20!UBERON:0002104;1.77e-10;21!UBERON:0001456;1.77e-10;21!UBERON:0000020;1.17e-09;23!UBERON:0001032;2.67e-09;24!UBERON:0004456;2.67e-09;24!UBERON:0010371;3.69e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,6.60e-50,4;UBERON:0005389,6.60e-50,4;UBERON:0000484,6.60e-50,4;UBERON:0002546,6.60e-50,4;UBERON:0000965,6.60e-50,4;UBERON:0001803,6.60e-50,4;UBERON:0003073,6.60e-50,4;UBERON:0005426,6.60e-50,4;UBERON:0000076,1.26e-25,8;UBERON:0007625,5.63e-19,11;UBERON:0001801,3.66e-15,14;UBERON:0000019,6.00e-11,20;UBERON:0000047,6.00e-11,20;UBERON:0010312,6.00e-11,20;UBERON:0004088,6.00e-11,20;UBERON:0010230,6.00e-11,20;UBERON:0003072,6.00e-11,20;UBERON:0004128,6.00e-11,20;UBERON:0003071,6.00e-11,20;UBERON:0000970,1.77e-10,21;UBERON:0002104,1.77e-10,21;UBERON:0001456,4.74e-10,22;UBERON:0000020,2.67e-09,24;UBERON:0001032,2.67e-09,24;UBERON:0004456,2.67e-09,24;UBERON:0005085,1.99e-07,31 | |||
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|short_description=p@chr12:132475501..132475504,+ | |short_description=p@chr12:132475501..132475504,+ | ||
}} | }} |
Latest revision as of 06:49, 24 July 2015
Short description: | p@chr12:132475501..132475504, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:132475501..132475504, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 6.60e-50 | 4 |
vertebrate lens cell | 6.60e-50 | 4 |
lens epithelial cell | 6.60e-50 | 4 |
neuron | 1.44e-09 | 6 |
neuroblast | 1.44e-09 | 6 |
electrically signaling cell | 1.44e-09 | 6 |
oligodendrocyte | 1.89e-08 | 7 |
macroglial cell | 1.89e-08 | 7 |
astrocyte | 1.89e-08 | 7 |
oligodendrocyte precursor cell | 1.89e-08 | 7 |
neural cell | 2.06e-08 | 25 |
columnar/cuboidal epithelial cell | 2.22e-08 | 27 |
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 6.60e-50 | 4 |
transparent eye structure | 6.60e-50 | 4 |
simple cuboidal epithelium | 6.60e-50 | 4 |
cranial placode | 6.60e-50 | 4 |
lens of camera-type eye | 6.60e-50 | 4 |
epithelium of lens | 6.60e-50 | 4 |
lens placode | 6.60e-50 | 4 |
lens vesicle | 6.60e-50 | 4 |
external ectoderm | 1.26e-25 | 8 |
pigment epithelium of eye | 5.63e-19 | 11 |
anterior segment of eyeball | 3.66e-15 | 14 |
camera-type eye | 6.00e-11 | 20 |
simple eye | 6.00e-11 | 20 |
immature eye | 6.00e-11 | 20 |
ocular region | 6.00e-11 | 20 |
eyeball of camera-type eye | 6.00e-11 | 20 |
optic cup | 6.00e-11 | 20 |
optic vesicle | 6.00e-11 | 20 |
eye primordium | 6.00e-11 | 20 |
eye | 1.77e-10 | 21 |
visual system | 1.77e-10 | 21 |
face | 4.74e-10 | 22 |
sense organ | 2.67e-09 | 24 |
sensory system | 2.67e-09 | 24 |
entire sense organ system | 2.67e-09 | 24 |
ectodermal placode | 1.99e-07 | 31 |