FFCP PHASE1:Hg19::chr12:34846341..34846350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:34846341..34846350,- | |||
|coexpression_cluster_id=C319 | |||
|description=CAGE_peak_at_chr12:34846341..34846350,- | |description=CAGE_peak_at_chr12:34846341..34846350,- | ||
|id=chr12:34846341..34846350,- | |id=chr12:34846341..34846350,- | ||
|ontology_enrichment_celltype=CL:0000453!6.79e-09!5;CL:0002274!1.23e-07!5;CL:0000457!1.23e-07!5;CL:0002191!1.23e-07!5;CL:0000097!1.23e-07!5;CL:0000831!1.23e-07!5;CL:0002028!1.23e-07!5 | |ontology_enrichment_celltype=CL:0000453!6.79e-09!5;CL:0002274!1.23e-07!5;CL:0000457!1.23e-07!5;CL:0002191!1.23e-07!5;CL:0000097!1.23e-07!5;CL:0000831!1.23e-07!5;CL:0002028!1.23e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002195;1.46e-14;2!CL:0002571;1.46e-14;2!CL:0000540;3.36e-11;6!CL:0000404;3.36e-11;6!CL:0000214;2.90e-10;3!CL:0002591;3.96e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,7.84e-15,2;CL:0002571,7.84e-15,2;CL:0000047,3.56e-14,8;CL:0000540,4.00e-11,6;CL:0000031,4.00e-11,6;CL:0000404,4.00e-11,6;CL:0000214,2.59e-10,3;CL:0002591,5.07e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000031;3.36e-11;6!UBERON:0005062;4.26e-08;4!UBERON:0007284;4.26e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.62e-10;3!UBERON:0000946;1.62e-10;3!UBERON:0006915;2.90e-10;3!UBERON:0007616;2.90e-10;3!UBERON:0002217;2.90e-10;3!UBERON:0002018;2.90e-10;3!UBERON:0002146;1.63e-08;1!UBERON:0002134;1.63e-08;1!UBERON:0005208;1.63e-08;1!UBERON:0005623;1.63e-08;1!UBERON:0004145;1.63e-08;1!UBERON:0005946;1.63e-08;1!UBERON:0005965;1.63e-08;1!UBERON:0002078;1.63e-08;1!UBERON:0010313;7.34e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.48e-10,3;UBERON:0009751,1.48e-10,3;UBERON:0000946,1.48e-10,3;UBERON:0002523,1.48e-10,3;UBERON:0005983,1.48e-10,3;UBERON:0002165,1.48e-10,3;UBERON:0002062,1.48e-10,3;UBERON:0007280,1.48e-10,3;UBERON:0006915,2.59e-10,3;UBERON:0007616,2.59e-10,3;UBERON:0002217,2.59e-10,3;UBERON:0002018,2.59e-10,3;UBERON:0004145,3.12e-10,3;UBERON:0002134,1.41e-08,1;UBERON:0005208,1.41e-08,1;UBERON:0005946,1.41e-08,1;UBERON:0005965,1.41e-08,1;UBERON:0002078,1.41e-08,1;UBERON:0002146,1.63e-08,1;UBERON:0005623,1.63e-08,1;UBERON:0010313,7.57e-07,10;UBERON:0002342,7.57e-07,10;UBERON:0005062,7.57e-07,10 | |||
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| ||
|short_description=p@chr12:34846341..34846350,- | |short_description=p@chr12:34846341..34846350,- | ||
}} | }} |
Latest revision as of 08:16, 24 July 2015
Short description: | p@chr12:34846341..34846350, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:34846341..34846350, - |
Coexpression cluster: | C319_CD14_Neural_Hepatocyte_Neurons_optic_heart_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 7.84e-15 | 2 |
hepatic mesenchymal stem cell | 7.84e-15 | 2 |
neuronal stem cell | 3.56e-14 | 8 |
neuron | 4.00e-11 | 6 |
neuroblast | 4.00e-11 | 6 |
electrically signaling cell | 4.00e-11 | 6 |
synovial cell | 2.59e-10 | 3 |
smooth muscle cell of the pulmonary artery | 5.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
valve | 1.48e-10 | 3 |
cardiac mesenchyme | 1.48e-10 | 3 |
cardial valve | 1.48e-10 | 3 |
tunica intima | 1.48e-10 | 3 |
heart layer | 1.48e-10 | 3 |
endocardium | 1.48e-10 | 3 |
endocardial cushion | 1.48e-10 | 3 |
presumptive endocardium | 1.48e-10 | 3 |
stratified squamous epithelium | 2.59e-10 | 3 |
layer of synovial tissue | 2.59e-10 | 3 |
synovial joint | 2.59e-10 | 3 |
synovial membrane of synovial joint | 2.59e-10 | 3 |
outflow tract | 3.12e-10 | 3 |
tricuspid valve | 1.41e-08 | 1 |
right atrium valve | 1.41e-08 | 1 |
outflow tract of atrium | 1.41e-08 | 1 |
outflow part of right atrium | 1.41e-08 | 1 |
right cardiac atrium | 1.41e-08 | 1 |
pulmonary valve | 1.63e-08 | 1 |
semi-lunar valve | 1.63e-08 | 1 |
neural crest-derived structure | 7.57e-07 | 10 |
neural crest | 7.57e-07 | 10 |
neural fold | 7.57e-07 | 10 |