FFCP PHASE1:Hg19::chr12:52913553..52913601,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:52913553..52913601,+
|short_description=p@chr12:52913553..52913601,+
|description=CAGE_peak_at_chr12:52913553..52913601,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52913553..52913601,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52913553..52913601,+ | |||
|id=chr12:52913553..52913601,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.22e-25!43;CL:0000223!9.13e-18!59;CL:0000066!2.04e-16!254;CL:0002251!1.40e-15!21;CL:0002159!3.94e-15!13;CL:0002368!8.98e-15!13;CL:0000622!5.65e-10!5;CL:0000244!2.97e-09!4;CL:0000731!2.97e-09!4;CL:0002077!4.08e-09!33;CL:0000076!1.07e-08!62;CL:0002202!2.26e-08!9;CL:0002632!2.26e-08!9;CL:0000154!3.15e-08!6;CL:0002328!1.65e-07!3;CL:0000068!3.19e-07!3;CL:0000069!3.19e-07!3;CL:0000307!3.19e-07!3;CL:0000377!3.19e-07!3;CL:0000349!3.39e-07!3;CL:0002577!3.39e-07!3;CL:0002166!4.98e-07!3;CL:0002621!5.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.76e-26;42!CL:0002368;7.12e-21;13!CL:0002159;1.09e-19;14!CL:0002251;8.83e-18;20!CL:0000244;1.75e-12;4!CL:0000731;1.75e-12;4!CL:0002202;1.07e-11;9!CL:0002632;1.07e-11;9!CL:0002328;4.99e-10;3!CL:0002077;5.99e-10;34!CL:0000307;1.22e-09;3!CL:0002577;1.52e-09;3!CL:0002621;2.33e-09;3!CL:0002166;2.36e-09;3!CL:0000622;3.35e-09;5!CL:0000240;8.37e-09;6!CL:0000311;8.37e-09;6!CL:0000079;8.37e-09;6!CL:0000237;8.37e-09;6!CL:0000362;3.54e-08;9!CL:0000349;5.49e-08;19!CL:0000154;1.15e-07;6!CL:0002327;1.34e-07;4!CL:0000575;1.71e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.78e-33,42;CL:0000066,1.76e-23,253;CL:0000223,4.40e-22,58;CL:0002368,7.36e-21,13;CL:0002159,1.10e-19,14;CL:0002251,1.03e-17,20;CL:0000244,1.67e-12,4;CL:0000731,1.67e-12,4;CL:0002077,1.01e-11,34;CL:0002202,1.10e-11,9;CL:0002632,1.10e-11,9;CL:0000076,2.66e-11,63;CL:0002328,4.99e-10,3;CL:0000068,1.27e-09,3;CL:0000069,1.27e-09,3;CL:0000307,1.27e-09,3;CL:0000377,1.27e-09,3;CL:0002577,1.39e-09,3;CL:0002166,2.40e-09,3;CL:0002621,2.54e-09,3;CL:0000622,3.39e-09,5;CL:0000240,8.45e-09,6;CL:0000311,8.45e-09,6;CL:0000079,8.45e-09,6;CL:0000237,8.45e-09,6;CL:0000036,8.45e-09,6;CL:0000357,8.45e-09,6;CL:0000114,8.45e-09,6;CL:0000362,3.54e-08,9;CL:0000349,5.00e-08,19;CL:0000154,1.16e-07,6;CL:0002327,1.31e-07,4;CL:0000575,1.71e-07,2;CL:0002321,7.35e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;1.63e-11;58!CL:0000377;1.22e-09;3!CL:0000357;8.37e-09;6!CL:0000114;8.37e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!4.30e-17!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.41e-17;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.84e-17,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.02e-20!35;UBERON:0000166!6.84e-20!21;UBERON:0001004!1.77e-17!72;UBERON:0000165!5.27e-16!28;UBERON:0000930!5.27e-16!28;UBERON:0004119!7.16e-16!169;UBERON:0000925!7.16e-16!169;UBERON:0006595!7.16e-16!169;UBERON:0003102!3.14e-13!95;UBERON:0005631!4.85e-12!14;UBERON:0000158!4.85e-12!14;UBERON:0000974!1.10e-10!10;UBERON:0001044!1.21e-10!6;UBERON:0003293!1.21e-10!6;UBERON:0003294!1.21e-10!6;UBERON:0010047!1.21e-10!6;UBERON:0000167!1.21e-10!6;UBERON:0000365!1.21e-10!5;UBERON:0003408!2.10e-10!10;UBERON:0003729!3.23e-10!5;UBERON:0001444!5.41e-10!48;UBERON:0005910!8.95e-09!6;UBERON:0000078!1.61e-08!18;UBERON:0000065!1.62e-08!53;UBERON:0001987!2.01e-08!4;UBERON:0004340!2.01e-08!4;UBERON:0007196!2.22e-08!14;UBERON:0001558!2.22e-08!14;UBERON:0000077!2.28e-08!130;UBERON:0003343!3.32e-08!4;UBERON:0004785!3.32e-08!4;UBERON:0001007!4.42e-08!155;UBERON:0001555!4.42e-08!155;UBERON:0007026!4.42e-08!155;UBERON:0004815!1.65e-07!3;UBERON:0002031!1.65e-07!3;UBERON:0006562!1.95e-07!11;UBERON:0000344!3.65e-07!12;UBERON:0003126!4.28e-07!7;UBERON:0001005!4.28e-07!7;UBERON:0001949!5.19e-07!3;UBERON:0003124!5.36e-07!7;UBERON:0004175!8.60e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.57e-14;28!UBERON:0003729;1.05e-12;13!UBERON:0000161;1.17e-12;19!UBERON:0000166;1.17e-12;19!UBERON:0000486;2.95e-11;12!UBERON:0003343;4.75e-11;4!UBERON:0004785;4.75e-11;4!UBERON:0000974;5.40e-11;6!UBERON:0004815;4.99e-10;3!UBERON:0002031;4.99e-10;3!UBERON:0000365;5.59e-10;5!UBERON:0000344;1.03e-09;20!UBERON:0001949;2.33e-09;3!UBERON:0007196;9.77e-09;15!UBERON:0001558;9.77e-09;15!UBERON:0001723;9.95e-09;3!UBERON:0001033;9.95e-09;3!UBERON:0005910;2.64e-08;6!UBERON:0001911;1.34e-07;4!UBERON:0001987;3.04e-07;4!UBERON:0001708;4.21e-07;4!UBERON:0008895;4.21e-07;4 | |||
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|short_description=p@chr12:52913553..52913601,+ | |||
}} | }} |
Latest revision as of 09:38, 24 July 2015
Short description: | p@chr12:52913553..52913601, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52913553..52913601, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.84e-17 | 14 |